Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0550400-01
CDS Infomation	cds chromosome:IRGSP-1.0:4:27551423:27560074:-1 gene:Os04g0550400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HISTONE MONOUBIQUITINATION1, HISTONE MONOUBIQUITINATION 1 description:E3 ligases of H2Bub1, Transcriptional regulation of anther development (Os04t0550400-01)
Sequence	ATGGGGAGCACGGGGGAGCCCGACCGGAAGCGGCGGCTCAGTAGCTCCGTCGCGCCCGGC GGCGGGGCCCCTGTTTCTCCTGCCAAGCGGCTGGCGGTTGCACCCACCTCCGAAGATAAG AAGCTCGATTTTACTGTACTCAAATACAAAAACCAAAAGCTCTCAGAGCAACTAGAAGCC CACAAGTTTGAGTATCGTGCTCTTGAAAATAAATTCGCTGGGCTAAAAGAGAAGCAGAGG ACTCATAATGAGACACTTTCCTTGGTCAACAGTTCTTGGGAACAACTTGTGGCAGACCTG AAGTCAAGATCTTTTTGCAAAAGTGGATCTCCTAATTCCAGCCCTGGTTCAGGGCACAAC AATGTACAAAAGGATGGTACTTGTGCACCCATAGAGAGGGACACTCTTAGAAGTCTTGTG GAATCTGGTGCAACTGAAAGTTCAGGTTGTTTGCCTGGTTGCCACTTGGGAAGTGATGCC CCTCCATTACATCTATCCACAGCTAATGCTCTTGGGGATATCTTTTTTCCATCAAGTGAT CTTTTGCAAGCAAATGAGGAGTGTGCTTTGGCTGCTCTCACTAAATTACCAGAAAATGAC CGCAGTAAGCAACTACAGAGTACTAGTAGCAACCTGTTGTCCAGCCTCAATAATGTCGTA CAAGCATTAAGTAATCTTCAGTTGAAGCACAAGCAGTTAGCAGAGGATTATCAAAATCAA AGAGATTCCAGTGCCCGAAAAAGAGCTGAACATAGACGTCTAAAAGAGGAGTTGGCCAGT GCTGCTTCTGAGTTGGAAGAAACTAACTACAAACTGGCAGCACTTAAAGCTCAAAGAGAT AATACACAAGGAGCTCGAATCCCATATCCTACATTAGGAAACAAAAATATGCCTGAAGAT AAGGTCAGAGATAAACAAAGAGAGATGCAGGATCTTGAAGCTACTCACAAGGAATTATCG GAATTGATTTCAAAGCGGTTGGTGGAAATTAAGAGATTACATGAAGAGAGAATTGAAATT TTGAACAAAATAGCAACTTTTCAGAATATCTTGATGGATTTCAAGAGCATTCGTTCTTCA AAAGCTTTTCAGCTTGTTAATGATCGACTTCAGAAGTCACAAGCAGAATTGGATCACTAC CAGACATTATTAGAGAAATTACAGGTTGATAAGGATAAGTTTGTGTGGCAAGAAAGGCAA TTTAATTTGAAAGTTGATCTGGCTGAGATTCCTGAGAGGGTTTCTACATATTGTGAGTCT AGCATTGCTGATCTCAAGAAGGATATTCAGAAACTATGTGATGAAAAAAACATGCTTATT CTCAAACTTGAAGAGGCTTCAAGAGAACCTGGTCGGAATCAAGTTATTACAAAATTTAAA GCTTTAGTGTCATCGATACCAAGGGAAATGGGCGCGATGCAGAGTGAAATGACCAAACAC AAGGAGGCTTCCTTGGAGTTGAATTCTTTGCGAGCAGAAGTCCATTCACTTTCTCGCATT CTGTCCAGAAAGGAACGTGATAATGAAGAAGCATCATGCAGATCTGCCCGTGCGGGATCT GATATAACACAACTTCAATCAGTGATTTCTGATCTGAAGCAAACTAATAAGGAGCTTAAG TTGTTCGCGGATATGTATAAGCGTGAATCCACTGATTCCAGGGAAATAATGGAATCCAGA GATAGGGAATTCCTTGAATGGGCTCATGTTCATGCCCTGAAATCATCTCTTGATGAAAGT AAGCTAGAGCAGCGTGTTAAGGCTGCCAATGAAGCTGAAGCAATCACACAGCAGAGGCTA GCAACTGCAGAAGCTGAGATTGCTGAATCAGGGCAGAAGCTTGGGACTTCTAGAAAGGAT CTAGTCAGTTTATCCCATATGCTGAAGTCTAAACAGGAAGAATGTGAAGCTTACAGAGTG GAGGTCGAGTGTATCGGGCAAGCATATGAGGACATACAGGCACAAAACCAACAATTGCTA CAGCAGATTATTGAAAGAGATGATGATAATACCAAGATTTTTATGGAGGGTGTTAAAGCA AAACAGACACAAGATGCTTTGCATTTGGAAACATATTCTTTGCGCAGAAACTTGCAGCAG GAAAGCTCTTTGATGGATCTGTACAACCAGAAAATTGTTTCCTTAGAAGATCAGCTTAAA ATGTGGTCTGATCGGGTTGGGAAACTTCAAGAGGATGGATGGCAACAATCTGTTTCATTG AGTAATTACCAAAGAAAGCTGGTTGATGTGCACAGAGATGCTCAAAAGCTTATGCAATCA TTGGATGGAATACAAGCGAATGTTGGAAGCAGTCGTTTGGAAGTCGCTGATCTGCTTATA GAACTTGAGAAAGAGAGGTTTAGTAAGAAGAGAATAGAGGATGATTTGGAGGTTATGTCA AGGAAAGCTAGCTCTCTTAGAGCCAAGGCACGTGAATCAGCAGTCCTGGAAAAGCTTCGT CATGAGGTCAAGGAGTATAGGGGGATATTGAAGTGTGGTATCTGCCATGATAGGCAGAAG GAGGTTGTGATTACCAAGTGCTACCATCTCTTCTGCAATCAGTGCATACAGAAGTCCCTT GGGAACCGACAGAGGAGATGTCCTTCATGTAGCTTGAGTTTTGGGGCTAATGACGTGAAA CCTATCTACATATGA

Peptide Sequence

PEP ID	Os04t0550400-01
PEP Infomation	pep chromosome:IRGSP-1.0:4:27551423:27560074:-1 gene:Os04g0550400 transcript:Os04t0550400-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HISTONE MONOUBIQUITINATION1, HISTONE MONOUBIQUITINATION 1 description:E3 ligases of H2Bub1, Transcriptional regulation of anther development (Os04t0550400-01)
Sequence	MGSTGEPDRKRRLSSSVAPGGGAPVSPAKRLAVAPTSEDKKLDFTVLKYKNQKLSEQLEA HKFEYRALENKFAGLKEKQRTHNETLSLVNSSWEQLVADLKSRSFCKSGSPNSSPGSGHN NVQKDGTCAPIERDTLRSLVESGATESSGCLPGCHLGSDAPPLHLSTANALGDIFFPSSD LLQANEECALAALTKLPENDRSKQLQSTSSNLLSSLNNVVQALSNLQLKHKQLAEDYQNQ RDSSARKRAEHRRLKEELASAASELEETNYKLAALKAQRDNTQGARIPYPTLGNKNMPED KVRDKQREMQDLEATHKELSELISKRLVEIKRLHEERIEILNKIATFQNILMDFKSIRSS KAFQLVNDRLQKSQAELDHYQTLLEKLQVDKDKFVWQERQFNLKVDLAEIPERVSTYCES SIADLKKDIQKLCDEKNMLILKLEEASREPGRNQVITKFKALVSSIPREMGAMQSEMTKH KEASLELNSLRAEVHSLSRILSRKERDNEEASCRSARAGSDITQLQSVISDLKQTNKELK LFADMYKRESTDSREIMESRDREFLEWAHVHALKSSLDESKLEQRVKAANEAEAITQQRL ATAEAEIAESGQKLGTSRKDLVSLSHMLKSKQEECEAYRVEVECIGQAYEDIQAQNQQLL QQIIERDDDNTKIFMEGVKAKQTQDALHLETYSLRRNLQQESSLMDLYNQKIVSLEDQLK MWSDRVGKLQEDGWQQSVSLSNYQRKLVDVHRDAQKLMQSLDGIQANVGSSRLEVADLLI ELEKERFSKKRIEDDLEVMSRKASSLRAKARESAVLEKLRHEVKEYRGILKCGICHDRQK EVVITKCYHLFCNQCIQKSLGNRQRRCPSCSLSFGANDVKPIYI

Transcript Sequence

Transcript ID	Os04t0550400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:27551423:27560074:-1 gene:Os04g0550400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HISTONE MONOUBIQUITINATION1, HISTONE MONOUBIQUITINATION 1 description:E3 ligases of H2Bub1, Transcriptional regulation of anther development (Os04t0550400-01)
Sequence	CTCTCTCCTCTCTGCGCCGTTCGCCTAGCTCTCCTCCCCCCCTTCTCTTCTTTCTCCTCA CGGTTCTCACCTCCTCCCCCCTTGACAGTGCACACGCCAAAACCACCGCTAACTCCCACC TCTCGCCCACACCTCCCTGATCCGATCCCTTCCCCCCTACAACCCTAGCCGAATTCCGCC TCCGCCGCGATCCGCTCGTCCCGCGCTCCAATTCCGTCCTTCATCCGCTCTTTGTTTTTT TTGCGATTGTTTTTTTGGGTGCGATTGGTTTGGTGATCCGCGTGTTAGGGTTCGGGAGTC GCCGGGGCGGGGGTTTGGGTGGTGGATTGGACCGGTAGGTGGCCGGGAGGGTTGGCCCTT GTGGTTTCGGGGTTTGGTTTCACCCGCCGCATGTGGAGAATCGGAGGACCTGGGAGAGGT TAGGGTTAGGGTTATGGGGAGCACGGGGGAGCCCGACCGGAAGCGGCGGCTCAGTAGCTC CGTCGCGCCCGGCGGCGGGGCCCCTGTTTCTCCTGCCAAGCGGCTGGCGGTTGCACCCAC CTCCGAAGATAAGAAGCTCGATTTTACTGTACTCAAATACAAAAACCAAAAGCTCTCAGA GCAACTAGAAGCCCACAAGTTTGAGTATCGTGCTCTTGAAAATAAATTCGCTGGGCTAAA AGAGAAGCAGAGGACTCATAATGAGACACTTTCCTTGGTCAACAGTTCTTGGGAACAACT TGTGGCAGACCTGAAGTCAAGATCTTTTTGCAAAAGTGGATCTCCTAATTCCAGCCCTGG TTCAGGGCACAACAATGTACAAAAGGATGGTACTTGTGCACCCATAGAGAGGGACACTCT TAGAAGTCTTGTGGAATCTGGTGCAACTGAAAGTTCAGGTTGTTTGCCTGGTTGCCACTT GGGAAGTGATGCCCCTCCATTACATCTATCCACAGCTAATGCTCTTGGGGATATCTTTTT TCCATCAAGTGATCTTTTGCAAGCAAATGAGGAGTGTGCTTTGGCTGCTCTCACTAAATT ACCAGAAAATGACCGCAGTAAGCAACTACAGAGTACTAGTAGCAACCTGTTGTCCAGCCT CAATAATGTCGTACAAGCATTAAGTAATCTTCAGTTGAAGCACAAGCAGTTAGCAGAGGA TTATCAAAATCAAAGAGATTCCAGTGCCCGAAAAAGAGCTGAACATAGACGTCTAAAAGA GGAGTTGGCCAGTGCTGCTTCTGAGTTGGAAGAAACTAACTACAAACTGGCAGCACTTAA AGCTCAAAGAGATAATACACAAGGAGCTCGAATCCCATATCCTACATTAGGAAACAAAAA TATGCCTGAAGATAAGGTCAGAGATAAACAAAGAGAGATGCAGGATCTTGAAGCTACTCA CAAGGAATTATCGGAATTGATTTCAAAGCGGTTGGTGGAAATTAAGAGATTACATGAAGA GAGAATTGAAATTTTGAACAAAATAGCAACTTTTCAGAATATCTTGATGGATTTCAAGAG CATTCGTTCTTCAAAAGCTTTTCAGCTTGTTAATGATCGACTTCAGAAGTCACAAGCAGA ATTGGATCACTACCAGACATTATTAGAGAAATTACAGGTTGATAAGGATAAGTTTGTGTG GCAAGAAAGGCAATTTAATTTGAAAGTTGATCTGGCTGAGATTCCTGAGAGGGTTTCTAC ATATTGTGAGTCTAGCATTGCTGATCTCAAGAAGGATATTCAGAAACTATGTGATGAAAA AAACATGCTTATTCTCAAACTTGAAGAGGCTTCAAGAGAACCTGGTCGGAATCAAGTTAT TACAAAATTTAAAGCTTTAGTGTCATCGATACCAAGGGAAATGGGCGCGATGCAGAGTGA AATGACCAAACACAAGGAGGCTTCCTTGGAGTTGAATTCTTTGCGAGCAGAAGTCCATTC ACTTTCTCGCATTCTGTCCAGAAAGGAACGTGATAATGAAGAAGCATCATGCAGATCTGC CCGTGCGGGATCTGATATAACACAACTTCAATCAGTGATTTCTGATCTGAAGCAAACTAA TAAGGAGCTTAAGTTGTTCGCGGATATGTATAAGCGTGAATCCACTGATTCCAGGGAAAT AATGGAATCCAGAGATAGGGAATTCCTTGAATGGGCTCATGTTCATGCCCTGAAATCATC TCTTGATGAAAGTAAGCTAGAGCAGCGTGTTAAGGCTGCCAATGAAGCTGAAGCAATCAC ACAGCAGAGGCTAGCAACTGCAGAAGCTGAGATTGCTGAATCAGGGCAGAAGCTTGGGAC TTCTAGAAAGGATCTAGTCAGTTTATCCCATATGCTGAAGTCTAAACAGGAAGAATGTGA AGCTTACAGAGTGGAGGTCGAGTGTATCGGGCAAGCATATGAGGACATACAGGCACAAAA CCAACAATTGCTACAGCAGATTATTGAAAGAGATGATGATAATACCAAGATTTTTATGGA GGGTGTTAAAGCAAAACAGACACAAGATGCTTTGCATTTGGAAACATATTCTTTGCGCAG AAACTTGCAGCAGGAAAGCTCTTTGATGGATCTGTACAACCAGAAAATTGTTTCCTTAGA AGATCAGCTTAAAATGTGGTCTGATCGGGTTGGGAAACTTCAAGAGGATGGATGGCAACA ATCTGTTTCATTGAGTAATTACCAAAGAAAGCTGGTTGATGTGCACAGAGATGCTCAAAA GCTTATGCAATCATTGGATGGAATACAAGCGAATGTTGGAAGCAGTCGTTTGGAAGTCGC TGATCTGCTTATAGAACTTGAGAAAGAGAGGTTTAGTAAGAAGAGAATAGAGGATGATTT GGAGGTTATGTCAAGGAAAGCTAGCTCTCTTAGAGCCAAGGCACGTGAATCAGCAGTCCT GGAAAAGCTTCGTCATGAGGTCAAGGAGTATAGGGGGATATTGAAGTGTGGTATCTGCCA TGATAGGCAGAAGGAGGTTGTGATTACCAAGTGCTACCATCTCTTCTGCAATCAGTGCAT ACAGAAGTCCCTTGGGAACCGACAGAGGAGATGTCCTTCATGTAGCTTGAGTTTTGGGGC TAATGACGTGAAACCTATCTACATATGAGGTTGTTAATTTCAAGATGGTATCGCAGGCAT CTAGATCAAGCTACTTTGATGGTCATTACTTGGTCATATGGTTAGATGACCATGCGAGTT GAAGATATGACAAGTACTAGCTTGTACAACCAAACATATAAGCAGAATGTAGTAGCCTAA TTTGGTTGGCTACATGGAATTGCAGGTGTCTGGCATTCGTGATGCTAATGTTTATTCCTG CTCCCTTGTATAGTTCGGGATTCTCCTGGAGTAGTTAAGTCGCTAGATTAGTCTGACTTT TGCTATATCCATTCTGTTCTTTTGGGGAAAAAACATCCAACAAAAGGGGTGGTGCTTCCC GCCATACTGAAACATTGTACCATATATAGCTTGTAGTTCCATTGTTGTAGCAGACAATAA GAATGTAGGTCTTACGGGTTTTCC