Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0548700-01
CDS Infomation	cds chromosome:IRGSP-1.0:4:27478192:27479717:-1 gene:Os04g0548700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HOMEOBOX GENE 17 description:Homeodomain-like containing protein. (Os04t0548700-01)
Sequence	ATGATGGAGAGGGCCGAGGACCTGCGCCTGAGCCTCAGTCTCAGCTCGCCGCTTATTGCT CCTCGTACTCACCATGTCGCCATGCTGTTCCACGCTCCTCCAGAGAAAAGATTCCTGGAG ATGCCGCTGCTCCCTGCTGCGAAGCGGAGCGAGGTCGTCGCGGCAGAAGAGGAGCGCGCG GGCCTGCGCGGCGGCGGCGGCAGCGACGAGGAGGACGGTGGCTGCGGCATCGACGGCTCA CGCAAGAAGCTCCGGCTTTCCAAGGACCAGTCCGCCGTGCTCGAGGACAGCTTCCGGGAG CACCCCACCCTCAACCCCAGGCAGAAGGCAACTTTGGCGCAGCAGCTCGGGCTTCGGCCT CGGCAGGTCGAGGTGTGGTTTCAGAACAGACGCGCAAGGACGAAGCTGAAGCAGACGGAG GTGGACTGCGAGTTCCTGAAGCGCTGCTGCGAGACGCTCACGGAGGAGAACCGGAGGCTG CAGAAGGAGGTGCAGGAGCTGCGAGCGCTCAAGCTCGTCTCGCCGCACCTCTACATGAAC ATGTCCCCGCCCACCACGCTCACCATGTGCCCCTCCTGCGAGCGCGTCTCCAACACCAAT AACAACTCCAGCGCCGCCGCCGCCGCCGACCGCCGCGGCATCAGGACTACTACTGCCGCA GGCGGCGGCAGCGTCGTCGACACCGCCGCCGACGGGGGCATCCTCTGCCACCGCCCGATC GCCGTCCGGCCGCAGCAGTCATGA

Peptide Sequence

PEP ID	Os04t0548700-01
PEP Infomation	pep chromosome:IRGSP-1.0:4:27478192:27479717:-1 gene:Os04g0548700 transcript:Os04t0548700-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HOMEOBOX GENE 17 description:Homeodomain-like containing protein. (Os04t0548700-01)
Sequence	MMERAEDLRLSLSLSSPLIAPRTHHVAMLFHAPPEKRFLEMPLLPAAKRSEVVAAEEERA GLRGGGGSDEEDGGCGIDGSRKKLRLSKDQSAVLEDSFREHPTLNPRQKATLAQQLGLRP RQVEVWFQNRRARTKLKQTEVDCEFLKRCCETLTEENRRLQKEVQELRALKLVSPHLYMN MSPPTTLTMCPSCERVSNTNNNSSAAAAADRRGIRTTTAAGGGSVVDTAADGGILCHRPI AVRPQQS

Transcript Sequence

Transcript ID	Os04t0548700-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:27478192:27479717:-1 gene:Os04g0548700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HOMEOBOX GENE 17 description:Homeodomain-like containing protein. (Os04t0548700-01)
Sequence	ACTTCCAAGTTCCAACTCTCAGCTAGCTGCAAACTCTACTCAGTTTGCATCGAGATATAC AGAGATCGAGTAGTCAGAGCTGAGAGCTAGTGGAGAGAAAGCACCAGGGAAGAACGCAGA GAGAGGTTACAGGGAGCGATGATGGAGAGGGCCGAGGACCTGCGCCTGAGCCTCAGTCTC AGCTCGCCGCTTATTGCTCCTCGTACTCACCATGTCGCCATGCTGTTCCACGCTCCTCCA GAGAAAAGATTCCTGGAGATGCCGCTGCTCCCTGCTGCGAAGCGGAGCGAGGTCGTCGCG GCAGAAGAGGAGCGCGCGGGCCTGCGCGGCGGCGGCGGCAGCGACGAGGAGGACGGTGGC TGCGGCATCGACGGCTCACGCAAGAAGCTCCGGCTTTCCAAGGACCAGTCCGCCGTGCTC GAGGACAGCTTCCGGGAGCACCCCACCCTCAACCCCAGGCAGAAGGCAACTTTGGCGCAG CAGCTCGGGCTTCGGCCTCGGCAGGTCGAGGTGTGGTTTCAGAACAGACGCGCAAGGACG AAGCTGAAGCAGACGGAGGTGGACTGCGAGTTCCTGAAGCGCTGCTGCGAGACGCTCACG GAGGAGAACCGGAGGCTGCAGAAGGAGGTGCAGGAGCTGCGAGCGCTCAAGCTCGTCTCG CCGCACCTCTACATGAACATGTCCCCGCCCACCACGCTCACCATGTGCCCCTCCTGCGAG CGCGTCTCCAACACCAATAACAACTCCAGCGCCGCCGCCGCCGCCGACCGCCGCGGCATC AGGACTACTACTGCCGCAGGCGGCGGCAGCGTCGTCGACACCGCCGCCGACGGGGGCATC CTCTGCCACCGCCCGATCGCCGTCCGGCCGCAGCAGTCATGACAAGCTAGCTAGCTTTTT ACTTCCTAGCTAGACAGACTACACCCGTACACTGTCCCCATGTGTCAACGAGGCAGCAAG CAGTGTACGTGCACATTATATTCGCGCAAGCTGTGTGTGTTGCGCTCACCGATCGATCGC TCAGTTGTTGTTTTTTTCCTTTTTGTTGGAAGCAGCTAGCTGGCTAGCTATTAGC