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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os04t0545400-00
CDS Infomation

cds chromosome:IRGSP-1.0:4:27328757:27329428:-1 gene:Os04g0545400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:UCLACYANIN-LIKE PROTEIN 14 description:Cupredoxin domain containing protein. (Os04t0545400-00)
Sequence

ATGGCTCAATCCTGCCTGGCTCTCGCGGTGTGCGTCCTGCTCGTGCACGGCGGCGCGGCG
AGGGTAGCCGAGGCGGCGTCGTACAACGTCGGCAACAGCGCCGGCTGGGACATCAGCGCC
GACTTCCCGTCCTGGCTCGACGGCAAGTCGTTCTTCGTCGGCGACACTCTCGTGTTCCAG
TACTCGAAGTACCACACGTTGAGCGAGGTCGACGAGGCGGGGTACAGGAACTGCAGCACG
GCCAGCGCGGTGCTCTCCAGCAGCGACGGCAACACGACGGTGGCCCTCACGGCGCCCGGC
GACCGCTACTTCGTCTGCGGCAACGAGCTGCACTGCCTCGGCGGCATGAGGCTTCACGTG
CCCGTCTCCGAGCCGGCCTCACCGGGCGGGGCCGGCGCGACGCCGGCGAGCCCGGGCGGC
GGCGGCGCCCTCTCCCCCGGCGCGGCCGGCGACGCGGGCGTCCCGACGCTCGACCTCGGC
GGGTCCCACCGGGTGACGGTGGGGCCCGCGGTGGCCACGTGGCTGTGCATCATCGCTGCA
GCCCTGTTTGTATGGTGA

Peptide Sequence

PEP ID

Os04t0545400-00
PEP Infomation

pep chromosome:IRGSP-1.0:4:27328757:27329428:-1 gene:Os04g0545400 transcript:Os04t0545400-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:UCLACYANIN-LIKE PROTEIN 14 description:Cupredoxin domain containing protein. (Os04t0545400-00)
Sequence

MAQSCLALAVCVLLVHGGAARVAEAASYNVGNSAGWDISADFPSWLDGKSFFVGDTLVFQ
YSKYHTLSEVDEAGYRNCSTASAVLSSSDGNTTVALTAPGDRYFVCGNELHCLGGMRLHV
PVSEPASPGGAGATPASPGGGGALSPGAAGDAGVPTLDLGGSHRVTVGPAVATWLCIIAA
ALFVW

Transcript Sequence

Transcript ID

Os04t0545400-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:4:27328757:27329428:-1 gene:Os04g0545400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:UCLACYANIN-LIKE PROTEIN 14 description:Cupredoxin domain containing protein. (Os04t0545400-00)
Sequence

ATGGCTCAATCCTGCCTGGCTCTCGCGGTGTGCGTCCTGCTCGTGCACGGCGGCGCGGCG
AGGGTAGCCGAGGCGGCGTCGTACAACGTCGGCAACAGCGCCGGCTGGGACATCAGCGCC
GACTTCCCGTCCTGGCTCGACGGCAAGTCGTTCTTCGTCGGCGACACTCTCGTGTTCCAG
TACTCGAAGTACCACACGTTGAGCGAGGTCGACGAGGCGGGGTACAGGAACTGCAGCACG
GCCAGCGCGGTGCTCTCCAGCAGCGACGGCAACACGACGGTGGCCCTCACGGCGCCCGGC
GACCGCTACTTCGTCTGCGGCAACGAGCTGCACTGCCTCGGCGGCATGAGGCTTCACGTG
CCCGTCTCCGAGCCGGCCTCACCGGGCGGGGCCGGCGCGACGCCGGCGAGCCCGGGCGGC
GGCGGCGCCCTCTCCCCCGGCGCGGCCGGCGACGCGGGCGTCCCGACGCTCGACCTCGGC
GGGTCCCACCGGGTGACGGTGGGGCCCGCGGTGGCCACGTGGCTGTGCATCATCGCTGCA
GCCCTGTTTGTATGGTGACGATTGATGACGA