Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0544100-01
CDS Infomation	cds chromosome:IRGSP-1.0:4:27244082:27246792:-1 gene:Os04g0544100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SET protein 20, SUVH Histone Methyltransferase 5 description:Similar to SET domain-containing protein SET104. (Os04t0544100-01)
Sequence	ATGGGGATCCCGGAGGTGGTGGTGCCGCCGAGGGCGGCCGGCCCGCGGAGGTACAAGGGG CTCGTGCCGTGGCGCTTCCAGCCGGGCTTCGTCAGGCCGCCTCCGGTCAAGCCCCCTGCC GCCGCCGCCGCCGTTGCCGGAGGAGGGGTCGCGGGCACGCCCGGCGGCAAGGGTCGCGGG TTGGGGGCGTCGGGGGAAGGCGTCGGGTCCAGTGGAGGCCGGGGAGATCCTCAATCGAGG AGATGCACCCGCAGCGCGAGCGCGAAGGGCTCTGGTGATGCGCGGAGCGTGGAGGAGGGC GGTCCCCGTGTTGCCGGAGACGACGGCGGTTCGGGCAAATCCGGCGTCGCGGCGGAGGGC TCCGGATTTGAGGGTTTGAGGAATGGCAGGGGCGGTGGCGTTGGAACGGCAGCTGCCGAA GATTGTGGTTTGGAGAAGTCCAACCCCGATGGCATCGTCGGAGATGCTGATGTGCATCTT GAGAGCGGCAGCGATGCAAGAGATGGGGAATGCGTTTCTGAGGGTTTGAAGAAGCCTTGT GTAAATAATAGCAATGGTTCTTCTGCCGCGGATTGCGCGCCGAAGGTGAAAAAGGGAAAT GACAGTGGCAATGGAGGTGCCGATGAGTGTAATGCTGCAGCCAAAAGTAGCAACTTAGCA TGTCCTGGCAACAATGGCGACGAAACGAATCGTAAGGGGCGGAAGGTAGTACTTCCATGG AGGTTCCAGGTTGGGTTCAAGCGGTCGTTCTCGAAAGCTTTCTGCTCCGATAGTGAATCT TCAGGGCCCTCTGGTACTCAATTCTACAGAGCCCAAGACTCTTCGACACCGTGCACTCCA GCAACAAGAAGTTCTGTCCGGTGTTATGCGAGTGCTCATTCTGGTGTTAGAGTCTCGGCC ATGCGTGATTTCTCAGTGAAAGGTGAGAAGGAAACATCAACTCCATATAAGAAGAGCAAA ACTGGCATGGATGGTCCTAGTCAAGGGATGCCAAAGAATGGAGTTGTCCTCGCTAGGGAA AACATTATGGGATCTCTGCAGAATTTTCGCTTAATTTACAGGGACCTTTTGGATGAAGAA GAAGAGAAGTCGACAGAAGCAGTGATTAGACCTGATCTACAAGCTTACAGAATTTTCAGG GAGCGGTTCATCACAGACTGCGATGAGAAGAAATATATTGGCAATGTGCCTGGAATCAAA GTTGGTGATATCTTCCACTTGAGGGTAGAGCTTTGTGTTGTTGGTCTTCATCGCCCACAC CGGGTGGGTGTAGATCATATCAAACAGGAGGATGGGACTTGCATAGCTGTTAGCATTGTA TCATATGCACAATCTTCCGATATTAAGAATAATTTGGATGTCTTGGTGTATTCTGGAGCA ATGACAGCTATAGCCAATCAGAAGATAGAGGGTACCAACTTAGCACTCAAGAAGAGTATG GACACTAACACACCAGTCCGTGTTATCCATGGTTTCGTCACTCACCTCAATGGAAACTGC CAGCGAAAGAAGATCCCTACTTATATATATGGGGGTTTATATATAGTCGAGAAATACTGG AGGGAGAAAGAGGGTAATGATCGTTATGTTTATATGTTCCGACTGAGAAGAATGGCAGGT CAGAAACACATTGACATCCAAGACATTCTGAATTCAGGACAAGCTGAATCATATGGTGGT ATTATCATAAAAGATATATCCCGAGGATTGGAGAAGATCCCTGTATCTGTTGTTAATTCA ATATCTGATGAGTACCCAATGCCCTATCGCTACATTGCACACCTGCAGTACCCCCGTAAC TACCAGCCAGCACCTCCAGCAGGCTGTGGTTGTGTTGGTGGATGCTCAGATTCTAAAAGG TGTGCATGTGCAGTGAAAAATGGTGGGGAGATTCCTTTCAATGATAAAGGCCGCATCTTA GAAGCAAAACCTCTTGTTTATGAGTGTGGACCTTCATGCAAGTGCCCTCCTACATGTCAT AACAGAGTTGGTCAACATGGCCTTAGGTTTCGTTTGCAAGTCTTCAAAACCAAATTGATG GGCTGGGGAGTAAGAACTCTTGACTTCATACCATCTGGAAGCTTTGTATGTGAATACATT GGAGAAGTGTTGGAGGATGAAGAGGCACAGAAAAGGTCGACCGATGAATACTTATTCGCT ATTGGTCATAATTATTATGATGAAGCCCTTTGGGAGGGCCTATCAAGATCCATACCCTCA CTTCAGAAGGGTCCTGATAAAGATGAGGAAGCTGGCTTTGCTGTTGATGCTTCAAAGATG GGCAACTTTGCAAAATTCATCAACCATAGTTGCACCCCTAACCTTTATGCACAAAATGTC CTATATGATCATGACGACAAGAGTGTACCTCACATTATGTTCTTTGCCTGTGAGGACATT CCACCCCGCCAAGAACTTTCATACCACTACAACTATACAATAGATCAGGTTCATGATGCC AATGGTAACATCAAGAAGAAAAAATGTCTCTGTGGCTCTATAGAGTGTGATGGTTGGTTG TATTAG

Peptide Sequence

PEP ID	Os04t0544100-01
PEP Infomation	pep chromosome:IRGSP-1.0:4:27244082:27246792:-1 gene:Os04g0544100 transcript:Os04t0544100-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SET protein 20, SUVH Histone Methyltransferase 5 description:Similar to SET domain-containing protein SET104. (Os04t0544100-01)
Sequence	MGIPEVVVPPRAAGPRRYKGLVPWRFQPGFVRPPPVKPPAAAAAVAGGGVAGTPGGKGRG LGASGEGVGSSGGRGDPQSRRCTRSASAKGSGDARSVEEGGPRVAGDDGGSGKSGVAAEG SGFEGLRNGRGGGVGTAAAEDCGLEKSNPDGIVGDADVHLESGSDARDGECVSEGLKKPC VNNSNGSSAADCAPKVKKGNDSGNGGADECNAAAKSSNLACPGNNGDETNRKGRKVVLPW RFQVGFKRSFSKAFCSDSESSGPSGTQFYRAQDSSTPCTPATRSSVRCYASAHSGVRVSA MRDFSVKGEKETSTPYKKSKTGMDGPSQGMPKNGVVLARENIMGSLQNFRLIYRDLLDEE EEKSTEAVIRPDLQAYRIFRERFITDCDEKKYIGNVPGIKVGDIFHLRVELCVVGLHRPH RVGVDHIKQEDGTCIAVSIVSYAQSSDIKNNLDVLVYSGAMTAIANQKIEGTNLALKKSM DTNTPVRVIHGFVTHLNGNCQRKKIPTYIYGGLYIVEKYWREKEGNDRYVYMFRLRRMAG QKHIDIQDILNSGQAESYGGIIIKDISRGLEKIPVSVVNSISDEYPMPYRYIAHLQYPRN YQPAPPAGCGCVGGCSDSKRCACAVKNGGEIPFNDKGRILEAKPLVYECGPSCKCPPTCH NRVGQHGLRFRLQVFKTKLMGWGVRTLDFIPSGSFVCEYIGEVLEDEEAQKRSTDEYLFA IGHNYYDEALWEGLSRSIPSLQKGPDKDEEAGFAVDASKMGNFAKFINHSCTPNLYAQNV LYDHDDKSVPHIMFFACEDIPPRQELSYHYNYTIDQVHDANGNIKKKKCLCGSIECDGWL Y

Transcript Sequence

Transcript ID	Os04t0544100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:27244082:27246792:-1 gene:Os04g0544100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SET protein 20, SUVH Histone Methyltransferase 5 description:Similar to SET domain-containing protein SET104. (Os04t0544100-01)
Sequence	AGGAGAACCCCCACCCCACCCACCTCGCCCCACTCCGCCGCGCCCCCTCCCCGCTGCCTC CGTGGAGCGTCATCTCCGCGTGCAGGGTTAGAGGCTTCTGGTGGTGGTGGGGGCAGTGCG GGGGGCGTTGGATGGGGATCCCGGAGGTGGTGGTGCCGCCGAGGGCGGCCGGCCCGCGGA GGTACAAGGGGCTCGTGCCGTGGCGCTTCCAGCCGGGCTTCGTCAGGCCGCCTCCGGTCA AGCCCCCTGCCGCCGCCGCCGCCGTTGCCGGAGGAGGGGTCGCGGGCACGCCCGGCGGCA AGGGTCGCGGGTTGGGGGCGTCGGGGGAAGGCGTCGGGTCCAGTGGAGGCCGGGGAGATC CTCAATCGAGGAGATGCACCCGCAGCGCGAGCGCGAAGGGCTCTGGTGATGCGCGGAGCG TGGAGGAGGGCGGTCCCCGTGTTGCCGGAGACGACGGCGGTTCGGGCAAATCCGGCGTCG CGGCGGAGGGCTCCGGATTTGAGGGTTTGAGGAATGGCAGGGGCGGTGGCGTTGGAACGG CAGCTGCCGAAGATTGTGGTTTGGAGAAGTCCAACCCCGATGGCATCGTCGGAGATGCTG ATGTGCATCTTGAGAGCGGCAGCGATGCAAGAGATGGGGAATGCGTTTCTGAGGGTTTGA AGAAGCCTTGTGTAAATAATAGCAATGGTTCTTCTGCCGCGGATTGCGCGCCGAAGGTGA AAAAGGGAAATGACAGTGGCAATGGAGGTGCCGATGAGTGTAATGCTGCAGCCAAAAGTA GCAACTTAGCATGTCCTGGCAACAATGGCGACGAAACGAATCGTAAGGGGCGGAAGGTAG TACTTCCATGGAGGTTCCAGGTTGGGTTCAAGCGGTCGTTCTCGAAAGCTTTCTGCTCCG ATAGTGAATCTTCAGGGCCCTCTGGTACTCAATTCTACAGAGCCCAAGACTCTTCGACAC CGTGCACTCCAGCAACAAGAAGTTCTGTCCGGTGTTATGCGAGTGCTCATTCTGGTGTTA GAGTCTCGGCCATGCGTGATTTCTCAGTGAAAGGTGAGAAGGAAACATCAACTCCATATA AGAAGAGCAAAACTGGCATGGATGGTCCTAGTCAAGGGATGCCAAAGAATGGAGTTGTCC TCGCTAGGGAAAACATTATGGGATCTCTGCAGAATTTTCGCTTAATTTACAGGGACCTTT TGGATGAAGAAGAAGAGAAGTCGACAGAAGCAGTGATTAGACCTGATCTACAAGCTTACA GAATTTTCAGGGAGCGGTTCATCACAGACTGCGATGAGAAGAAATATATTGGCAATGTGC CTGGAATCAAAGTTGGTGATATCTTCCACTTGAGGGTAGAGCTTTGTGTTGTTGGTCTTC ATCGCCCACACCGGGTGGGTGTAGATCATATCAAACAGGAGGATGGGACTTGCATAGCTG TTAGCATTGTATCATATGCACAATCTTCCGATATTAAGAATAATTTGGATGTCTTGGTGT ATTCTGGAGCAATGACAGCTATAGCCAATCAGAAGATAGAGGGTACCAACTTAGCACTCA AGAAGAGTATGGACACTAACACACCAGTCCGTGTTATCCATGGTTTCGTCACTCACCTCA ATGGAAACTGCCAGCGAAAGAAGATCCCTACTTATATATATGGGGGTTTATATATAGTCG AGAAATACTGGAGGGAGAAAGAGGGTAATGATCGTTATGTTTATATGTTCCGACTGAGAA GAATGGCAGGTCAGAAACACATTGACATCCAAGACATTCTGAATTCAGGACAAGCTGAAT CATATGGTGGTATTATCATAAAAGATATATCCCGAGGATTGGAGAAGATCCCTGTATCTG TTGTTAATTCAATATCTGATGAGTACCCAATGCCCTATCGCTACATTGCACACCTGCAGT ACCCCCGTAACTACCAGCCAGCACCTCCAGCAGGCTGTGGTTGTGTTGGTGGATGCTCAG ATTCTAAAAGGTGTGCATGTGCAGTGAAAAATGGTGGGGAGATTCCTTTCAATGATAAAG GCCGCATCTTAGAAGCAAAACCTCTTGTTTATGAGTGTGGACCTTCATGCAAGTGCCCTC CTACATGTCATAACAGAGTTGGTCAACATGGCCTTAGGTTTCGTTTGCAAGTCTTCAAAA CCAAATTGATGGGCTGGGGAGTAAGAACTCTTGACTTCATACCATCTGGAAGCTTTGTAT GTGAATACATTGGAGAAGTGTTGGAGGATGAAGAGGCACAGAAAAGGTCGACCGATGAAT ACTTATTCGCTATTGGTCATAATTATTATGATGAAGCCCTTTGGGAGGGCCTATCAAGAT CCATACCCTCACTTCAGAAGGGTCCTGATAAAGATGAGGAAGCTGGCTTTGCTGTTGATG CTTCAAAGATGGGCAACTTTGCAAAATTCATCAACCATAGTTGCACCCCTAACCTTTATG CACAAAATGTCCTATATGATCATGACGACAAGAGTGTACCTCACATTATGTTCTTTGCCT GTGAGGACATTCCACCCCGCCAAGAACTTTCATACCACTACAACTATACAATAGATCAGG TTCATGATGCCAATGGTAACATCAAGAAGAAAAAATGTCTCTGTGGCTCTATAGAGTGTG ATGGTTGGTTGTATTAGGCTTGAGAGTGTACTATTTCCAGAGGCATAATTGAACTTCTTT CATTGGGCATG