Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0543700-01
CDS Infomation	cds chromosome:IRGSP-1.0:4:27222677:27226323:1 gene:Os04g0543700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Serine protease 2, Subtilisin 42, SUBTILISIN 42 description:Similar to Serine proteinase (Fragment). (Os04t0543700-01)
Sequence	AGTGACACTATTGTCATGGCTTTTTGCAAACCATGTCTAGTATTCTATTCTGTTCTTACT TTTCTGATCCTAAATGGTGGTCCATCTCATGTACTTGCAAAGGTTTTTATGGTGGTGATG GAGGATGACCCAATCATTTCCCCCAAGTCAAGCCAAAAGAAAGTAATGAGAGGTGAGGAA GCTCAGAAGTACAAGGCAATGACCACAACGAAGCATGATATCTTCCTGGATTCATTTCTC CCAGCTGGATCTTACAAGAAGCTATACAGTTACACCCACCTTCTCAATGGCTTTGCTATC TATGCAAAATCTGAAAAGGCAATTAAAACTCTTAGTGGAGCAAAAGGAGTTAGACTCATC CAAGAAGATATAAAAATGGCCAAGATGACCACATACACTCCGAGGTACATTGGAGCTAAT GTAGTCTGGCCGCTCCTCGGTGGTGCCGAGAAGGCTGGTGACGGAGTAGTCATTGGCATG GTAGATACTGGCATTGACCCCAGCAACCCAAGCTTTTTAAGCACATCGGACCAAGCAAAA CCACCACCGGCCAGTTTCAAAGGAACATGTCAAACTGGCGAAAGATTTCCTCCAGATTCA TGCAATGGTAAGATTGTTGGAGCTAGGTGGTTTGCACGTGCTGGTCAAGCAACTGGAGAG TTCAATGCTACAATGCACTATGCATCTCCTTACGATCCTGATGGCCATGGCAGCCACACA GCGTCCACTGCAGCTGGCAATTTTCATACGCCAGCAATATCAAAGGGCTACAACTTTGGG CATGCAAGTGGCGTAGCACCTGGAGCTCATCTTGCAATCTACAAAGCTGCCTATTCTTTT GGTGGATACATGTCAGATGTTATAGCTGCAGTTGACAAGGCTGTAGAAGATGGCGTCGAT ATTATCAGTCTTTCACTGGGACCAACTACTATTACATCTGGGCCAGCATCATTCCTCAAT TTGCTCGAGACACAACTTCTCCTTGCCACCAAGGCTGGGATCTCAGTTGTTCAAGCAGTT GGCAATGGAGGCCCTGATGCAAACTCAGTAGTTTCGTTCAGCCCATGGATAACAAGTGTT GGGGCATCCACAACTGACAGGAAGTATAACAAATCAATTATAATTGGAAATGGGCAAGTC TTCTCTTGCGGCGGCCTATCACCATCGACACCAGGCGAGACCATGTACCCTCTAGCATTG GCTGATGATGTGTGCAACACGAATTCAACTGGTGGATCTTCCAACTGCCAAGATCCGGAT GTCTTCATAAGATCTCTTGTCCAGGGGAAGGTGATTATTTGCATGTTTGTGTCGTCAAAC TACTACGAAGGCGACTTCCTTGCTGGCATTGTCGATACGATTCAGAAAATTGGTGCTGCC GGAGTTATCATCACTGACCGTTCTTCGAGTGACTCCGACATTGAATATCATCCCACATTT CCGACGTCAATCCCTTCAGCCATAGTTGTGAACAGTGCTGATGCACAGGCTCTATTGGAG TACTACGACGACAACTTGGTCCGAGACAAGGAAGGAAGTGTCACCAAGTTCGGCGCAACC ATCCGAATTCTGGATGGACGGCGAGCAATCTACACCAGGGAGGCGCCCGTCGTCGCCGAG TACTCGTCGAGGGGCCCGGACGTCGACGACATGCAGATGCAGGCGGCGGACGTGCTGAAG CCGAACGTCATGGCGCCGGGCCATCACATCTGGGGAGCCTGGAGCCCGACGAGCGACGCC ATGGTCGAGTTCCAGGGCGAGAGCTACGCGATGCTGTCCGGCACGAGCATGGCCACCCCG CACGTCGCCGGTGTGGTGGCCCTGATCAGGCAGAGGCACCCCAAGTGGAGCCCCGCCATG GTCATGTCGGCGATCATGACCACCGCCGACGTCACCGACCGCTCCGGGAGGCCCCTGATG GCGCGGCGTGACGGGGGCGTCCTGGAGCGCGCGACGCCGTTCGACATGGGCGCCGGGGCC ATCAACGCGGCGCGCGCCGTCGACCCGGGCCTGGTGTTCGACGCCGGGTACCGGGACTAC CTCCAGTTCCTGTGCGCCGTGCCTGGCGTGGACGACGCCGCGGTGCTCCGCGCGGTGGGC GTGCCCTGCCCGCCGTCGCGGGCGCGGTGGTGCTCGGACCTGAACGCGCCGAGCGTGACG GTGGCGAGCCTGGTGGGGTCGCGGCGGGTGGACCGGCGGGTGACGAGCGTGGGCGCGGAG AACGAGACGTACATGGCGCACGTGCAGGCGCCCGACGGCGTGGCGGTGCGCGTGTCGCCG GACACGTTCGCCGTCGCCCCCGGCGCGACGGCCACGCTGAGGATCGTGCTCAACACCACC GCGCCGGGGAACACCTTCAGCTTCGGCGAGGTGGTCCTCAGGGGCGACAAGAAGCACACC GTGAGGATCCCCCTCGCTGTCTTCCCCGCCGCGGCGTTGAGCCCGTGA

Peptide Sequence

PEP ID	Os04t0543700-01
PEP Infomation	pep chromosome:IRGSP-1.0:4:27222677:27226323:1 gene:Os04g0543700 transcript:Os04t0543700-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Serine protease 2, Subtilisin 42, SUBTILISIN 42 description:Similar to Serine proteinase (Fragment). (Os04t0543700-01)
Sequence	SDTIVMAFCKPCLVFYSVLTFLILNGGPSHVLAKVFMVVMEDDPIISPKSSQKKVMRGEE AQKYKAMTTTKHDIFLDSFLPAGSYKKLYSYTHLLNGFAIYAKSEKAIKTLSGAKGVRLI QEDIKMAKMTTYTPRYIGANVVWPLLGGAEKAGDGVVIGMVDTGIDPSNPSFLSTSDQAK PPPASFKGTCQTGERFPPDSCNGKIVGARWFARAGQATGEFNATMHYASPYDPDGHGSHT ASTAAGNFHTPAISKGYNFGHASGVAPGAHLAIYKAAYSFGGYMSDVIAAVDKAVEDGVD IISLSLGPTTITSGPASFLNLLETQLLLATKAGISVVQAVGNGGPDANSVVSFSPWITSV GASTTDRKYNKSIIIGNGQVFSCGGLSPSTPGETMYPLALADDVCNTNSTGGSSNCQDPD VFIRSLVQGKVIICMFVSSNYYEGDFLAGIVDTIQKIGAAGVIITDRSSSDSDIEYHPTF PTSIPSAIVVNSADAQALLEYYDDNLVRDKEGSVTKFGATIRILDGRRAIYTREAPVVAE YSSRGPDVDDMQMQAADVLKPNVMAPGHHIWGAWSPTSDAMVEFQGESYAMLSGTSMATP HVAGVVALIRQRHPKWSPAMVMSAIMTTADVTDRSGRPLMARRDGGVLERATPFDMGAGA INAARAVDPGLVFDAGYRDYLQFLCAVPGVDDAAVLRAVGVPCPPSRARWCSDLNAPSVT VASLVGSRRVDRRVTSVGAENETYMAHVQAPDGVAVRVSPDTFAVAPGATATLRIVLNTT APGNTFSFGEVVLRGDKKHTVRIPLAVFPAAALSP

Transcript Sequence

Transcript ID	Os04t0543700-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:27222677:27226323:1 gene:Os04g0543700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Serine protease 2, Subtilisin 42, SUBTILISIN 42 description:Similar to Serine proteinase (Fragment). (Os04t0543700-01)
Sequence	AAGTGACACTATTGTCATGGCTTTTTGCAAACCATGTCTAGTATTCTATTCTGTTCTTAC TTTTCTGATCCTAAATGGTGGTCCATCTCATGTACTTGCAAAGGTTTTTATGGTGGTGAT GGAGGATGACCCAATCATTTCCCCCAAGTCAAGCCAAAAGAAAGTAATGAGAGGTGAGGA AGCTCAGAAGTACAAGGCAATGACCACAACGAAGCATGATATCTTCCTGGATTCATTTCT CCCAGCTGGATCTTACAAGAAGCTATACAGTTACACCCACCTTCTCAATGGCTTTGCTAT CTATGCAAAATCTGAAAAGGCAATTAAAACTCTTAGTGGAGCAAAAGGAGTTAGACTCAT CCAAGAAGATATAAAAATGGCCAAGATGACCACATACACTCCGAGGTACATTGGAGCTAA TGTAGTCTGGCCGCTCCTCGGTGGTGCCGAGAAGGCTGGTGACGGAGTAGTCATTGGCAT GGTAGATACTGGCATTGACCCCAGCAACCCAAGCTTTTTAAGCACATCGGACCAAGCAAA ACCACCACCGGCCAGTTTCAAAGGAACATGTCAAACTGGCGAAAGATTTCCTCCAGATTC ATGCAATGGTAAGATTGTTGGAGCTAGGTGGTTTGCACGTGCTGGTCAAGCAACTGGAGA GTTCAATGCTACAATGCACTATGCATCTCCTTACGATCCTGATGGCCATGGCAGCCACAC AGCGTCCACTGCAGCTGGCAATTTTCATACGCCAGCAATATCAAAGGGCTACAACTTTGG GCATGCAAGTGGCGTAGCACCTGGAGCTCATCTTGCAATCTACAAAGCTGCCTATTCTTT TGGTGGATACATGTCAGATGTTATAGCTGCAGTTGACAAGGCTGTAGAAGATGGCGTCGA TATTATCAGTCTTTCACTGGGACCAACTACTATTACATCTGGGCCAGCATCATTCCTCAA TTTGCTCGAGACACAACTTCTCCTTGCCACCAAGGCTGGGATCTCAGTTGTTCAAGCAGT TGGCAATGGAGGCCCTGATGCAAACTCAGTAGTTTCGTTCAGCCCATGGATAACAAGTGT TGGGGCATCCACAACTGACAGGAAGTATAACAAATCAATTATAATTGGAAATGGGCAAGT CTTCTCTTGCGGCGGCCTATCACCATCGACACCAGGCGAGACCATGTACCCTCTAGCATT GGCTGATGATGTGTGCAACACGAATTCAACTGGTGGATCTTCCAACTGCCAAGATCCGGA TGTCTTCATAAGATCTCTTGTCCAGGGGAAGGTGATTATTTGCATGTTTGTGTCGTCAAA CTACTACGAAGGCGACTTCCTTGCTGGCATTGTCGATACGATTCAGAAAATTGGTGCTGC CGGAGTTATCATCACTGACCGTTCTTCGAGTGACTCCGACATTGAATATCATCCCACATT TCCGACGTCAATCCCTTCAGCCATAGTTGTGAACAGTGCTGATGCACAGGCTCTATTGGA GTACTACGACGACAACTTGGTCCGAGACAAGGAAGGAAGTGTCACCAAGTTCGGCGCAAC CATCCGAATTCTGGATGGACGGCGAGCAATCTACACCAGGGAGGCGCCCGTCGTCGCCGA GTACTCGTCGAGGGGCCCGGACGTCGACGACATGCAGATGCAGGCGGCGGACGTGCTGAA GCCGAACGTCATGGCGCCGGGCCATCACATCTGGGGAGCCTGGAGCCCGACGAGCGACGC CATGGTCGAGTTCCAGGGCGAGAGCTACGCGATGCTGTCCGGCACGAGCATGGCCACCCC GCACGTCGCCGGTGTGGTGGCCCTGATCAGGCAGAGGCACCCCAAGTGGAGCCCCGCCAT GGTCATGTCGGCGATCATGACCACCGCCGACGTCACCGACCGCTCCGGGAGGCCCCTGAT GGCGCGGCGTGACGGGGGCGTCCTGGAGCGCGCGACGCCGTTCGACATGGGCGCCGGGGC CATCAACGCGGCGCGCGCCGTCGACCCGGGCCTGGTGTTCGACGCCGGGTACCGGGACTA CCTCCAGTTCCTGTGCGCCGTGCCTGGCGTGGACGACGCCGCGGTGCTCCGCGCGGTGGG CGTGCCCTGCCCGCCGTCGCGGGCGCGGTGGTGCTCGGACCTGAACGCGCCGAGCGTGAC GGTGGCGAGCCTGGTGGGGTCGCGGCGGGTGGACCGGCGGGTGACGAGCGTGGGCGCGGA GAACGAGACGTACATGGCGCACGTGCAGGCGCCCGACGGCGTGGCGGTGCGCGTGTCGCC GGACACGTTCGCCGTCGCCCCCGGCGCGACGGCCACGCTGAGGATCGTGCTCAACACCAC CGCGCCGGGGAACACCTTCAGCTTCGGCGAGGTGGTCCTCAGGGGCGACAAGAAGCACAC CGTGAGGATCCCCCTCGCTGTCTTCCCCGCCGCGGCGTTGAGCCCGTGAAGCCCCGAACA GGGATAGTCCTGGTATATACAAATATTACTTACGTATACGTATGCGAGCGGATGGAGTTG TACGATGAATGAATAACATGTATACATACACTATACTCGTGTTCGAGCAAACAAGAATAC GAGCCATGTATCGTATAATCGGATATTATGGGCCGCAACGGACCAACCGGACTGTGCCCC TGCTGGGTTATTCCTCTAGTTGGGCCGGAGCACGGAGGAGAGCTGGTCAGCCATAATGGG CTTTCGTTCTGATGCAAAGCAACGGCCTCTGCTAACTTCGGCTTGTCGAGCATCTCTAGC AGCTTTTGCCAGATGCCAGACTACCATGGACGGGTTTGACTGTGGCTTCTCTTTTTAATT TTTTTGATTTG