Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0543200-01
CDS Infomation	cds chromosome:IRGSP-1.0:4:27200275:27204752:1 gene:Os04g0543200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Nucleotide-binding, alpha-beta plait domain containing protein. (Os04t0543200-01)
Sequence	ATGCCGCCGAAGGCTAGGAGGGGCGCCGCGGCGGCGGGGAGGAAGGGGCCAGGGACGAGG GGCAGGCTGGTGAAGGCGCAGGCGGCCGTGGAGGAGGTGCCCGCCGAGGAGGTTAAGGCT GCGGAGGAGGCCCCGAAGGTGGAGGAGCAGAAGCGCCAGCCGTCACCGCCACTGCAGCAG CCGGCCGCGGAGGAGAAGGCCTCGTCCGACGCTGCAGCGAACGGCGCGAGCCACGGTGAA GATGAGGGAACTACAAAAGAAACATATGAAGAGGATAAAGGTGAACGATTGGAATTTGAA GATGAACCAGAATATGAAGAGGAGGCTGCTGTGGACTACGATGAGAAGGACTTGGAGCAA TATGAAGAGCAATACGAGGATGGTGATGAAGTGGTGGAATATACTGAAGATGTGATTGAA GAGGAGACGGATATGGTAGACGAGGAATTGGATGGTGGGGACGATGGGGAGGGTGAAGGA TATGAAAATGCCGAAGAAGAGCATAATGTGGATGTGGAGGATGAAGAGCATCATGAAATG GTGAAAGAGCATCGCAAGCGGAAGGAGTTTGAAGTTTTTGTTGGTGGGCTTGATAAAGAT GCAACAGAAAGCGATCTTAGGAAGGTTTTTGGTGAAGTTGGCGAGATCACTGAAGTTCGT TTGATGATGAACCCTGTTACAAAGAAAAATAAAGGCTTTGCCTTTCTGCGATATGCGACT GTAGAACAAGCAAGGCGGGCGGTGTCAGAGCTAAAGAATCCTTCGGTGAGAGGCAAACAA TGTGGTGTTGCTCCTAGTCATGACAACGATACTCTTTTTGTGGGCAATATCTGCAAGACA TGGACTAAAGAACATCTGAAGGAGAAACTCAAGAGTTACGGTGTTGAGAATTTTGATGAT CTACTATTAGTTGAGGACAGCAATAATCCAGGAATGAATCGTGGGTATGCTTTACTTGAG TTTTCTACTCGCCCTGAAGCAATGGATGCTTTTAGGCGATTGCAGAAGAGGGATGTAGTT TTTGGAGTTGATCGTAGTGCAAAGGTTTCCTTTGCTGATTCCTACCCCGAAGTTGACGAT GAAATAATGGCACAGGTTAGAACTGTATTTATTGATGGCCTTCCTCCCTCATGGGATGAA GATCGTGTCAAGAAGTACCTTAAAAAATATGGAGCTATTGAGAAAGTTGAACTAGCCCGA AATATGCCAGCAGCCAAGAGAAAGGATTTTGGGTTTGTTACTTTTGATACACATGATAAT GCTGTTGCATGTGCTGATGGGATAACTAATTCTGAGATTGGTGAAGGTGACAGCAAGGCA AAAGTGAGAGCCAGATTGTCGAGACCATTGCAGAGACCTCCTAGAATGAAGCATGGATTA AGAGGAAATTTTAGGGTTGGGCAGGGTGCTCCTCGAGGTGGACGTTTTGCATATGATCGT CCTCCTCCACTTCGCCGGCCTCCACCTCGTCTTTTAAGACCCGATGTTAGTCGCTTACCA CCACCGGTCAGGAGCCGCCCACTGAAGAGGCCAGTAGATATTAGAGATAGGCGCCCTGTT ATGTCAATACCAGATAGAGTTAGGCGTTTGCCTCCACCCGAGAGATCATATGACAGAAGG CCCCCAGCTCCTGTGTACCCAAAGAGAAGCCCAAGGAGAGAATATGGAAGGCGTGATGAA CTTCCTCCGCCAAGAAGCAGAGCTACCTTTGGTGACTATAGTTCAAGAGTTCCAGTGGAT AGACGCCCCTATAGGGATGATTATTCACCCCGGGGGTCAGCCTATTCGGACCTAGGTCCT CGTAGTGCTCCCCGCCTTTCTGATAGGCGAGCATATATTGATGATGGTTATGGAGGGAAG ATTGACCGTCCTTTACCAACATATAGGGAGGGCCGTGGTCGTGATTATGATACAATGTCT GGTTCAAAACGCTCATATGCTGAGATGGATGATGTGCCACCTCGATATCATGACATTAGT GTTCGTCAGTCTAAGGCACGCTTAGACTATGATGTTGGTGGCAGCAGTGCCCGGTATGCA GATACATATAGCGAGAGGCTTGGACGATCACATGCGGGATACAGTGGTGGCAGATCTGTC TCTGGTCATGATCCAGTGTACAGTAGTGGTCGGCATGGCATGAGTTATGGAGGTTCCGCA AGCAGTAATGATGCTGGTGGAATGTACTCATCAAATTTCAGTGGTAGCTACATGTCTCGT GGGTCTGATGTTGGTGGAAGTTCATATTCATCACTTTACTCAGGGCGTAATGTAGGTAGC AGCAGTGGCTACTATGGCGGTAGTGGTTCTAGTTCATATTACTGA

Peptide Sequence

PEP ID	Os04t0543200-01
PEP Infomation	pep chromosome:IRGSP-1.0:4:27200275:27204752:1 gene:Os04g0543200 transcript:Os04t0543200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Nucleotide-binding, alpha-beta plait domain containing protein. (Os04t0543200-01)
Sequence	MPPKARRGAAAAGRKGPGTRGRLVKAQAAVEEVPAEEVKAAEEAPKVEEQKRQPSPPLQQ PAAEEKASSDAAANGASHGEDEGTTKETYEEDKGERLEFEDEPEYEEEAAVDYDEKDLEQ YEEQYEDGDEVVEYTEDVIEEETDMVDEELDGGDDGEGEGYENAEEEHNVDVEDEEHHEM VKEHRKRKEFEVFVGGLDKDATESDLRKVFGEVGEITEVRLMMNPVTKKNKGFAFLRYAT VEQARRAVSELKNPSVRGKQCGVAPSHDNDTLFVGNICKTWTKEHLKEKLKSYGVENFDD LLLVEDSNNPGMNRGYALLEFSTRPEAMDAFRRLQKRDVVFGVDRSAKVSFADSYPEVDD EIMAQVRTVFIDGLPPSWDEDRVKKYLKKYGAIEKVELARNMPAAKRKDFGFVTFDTHDN AVACADGITNSEIGEGDSKAKVRARLSRPLQRPPRMKHGLRGNFRVGQGAPRGGRFAYDR PPPLRRPPPRLLRPDVSRLPPPVRSRPLKRPVDIRDRRPVMSIPDRVRRLPPPERSYDRR PPAPVYPKRSPRREYGRRDELPPPRSRATFGDYSSRVPVDRRPYRDDYSPRGSAYSDLGP RSAPRLSDRRAYIDDGYGGKIDRPLPTYREGRGRDYDTMSGSKRSYAEMDDVPPRYHDIS VRQSKARLDYDVGGSSARYADTYSERLGRSHAGYSGGRSVSGHDPVYSSGRHGMSYGGSA SSNDAGGMYSSNFSGSYMSRGSDVGGSSYSSLYSGRNVGSSSGYYGGSGSSSYY

Transcript Sequence

Transcript ID	Os04t0543200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:27200275:27204752:1 gene:Os04g0543200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Nucleotide-binding, alpha-beta plait domain containing protein. (Os04t0543200-01)
Sequence	GGGTTCCGTTCCTTTCCGTGTTGCCTCCCACCGCAATCTCGTTTCGGCTCTCCGGCCCTC TCCTAGGGTTTCGATTCCTCGCCCCCTCGATCCTCGACGACGCGAGGTGGTTTTCCTTTT TTTTTTGGTTTTGTTTGTGAGAGTGGGGGGAGATGCCGCCGAAGGCTAGGAGGGGCGCCG CGGCGGCGGGGAGGAAGGGGCCAGGGACGAGGGGCAGGCTGGTGAAGGCGCAGGCGGCCG TGGAGGAGGTGCCCGCCGAGGAGGTTAAGGCTGCGGAGGAGGCCCCGAAGGTGGAGGAGC AGAAGCGCCAGCCGTCACCGCCACTGCAGCAGCCGGCCGCGGAGGAGAAGGCCTCGTCCG ACGCTGCAGCGAACGGCGCGAGCCACGGTGAAGATGAGGGAACTACAAAAGAAACATATG AAGAGGATAAAGGTGAACGATTGGAATTTGAAGATGAACCAGAATATGAAGAGGAGGCTG CTGTGGACTACGATGAGAAGGACTTGGAGCAATATGAAGAGCAATACGAGGATGGTGATG AAGTGGTGGAATATACTGAAGATGTGATTGAAGAGGAGACGGATATGGTAGACGAGGAAT TGGATGGTGGGGACGATGGGGAGGGTGAAGGATATGAAAATGCCGAAGAAGAGCATAATG TGGATGTGGAGGATGAAGAGCATCATGAAATGGTGAAAGAGCATCGCAAGCGGAAGGAGT TTGAAGTTTTTGTTGGTGGGCTTGATAAAGATGCAACAGAAAGCGATCTTAGGAAGGTTT TTGGTGAAGTTGGCGAGATCACTGAAGTTCGTTTGATGATGAACCCTGTTACAAAGAAAA ATAAAGGCTTTGCCTTTCTGCGATATGCGACTGTAGAACAAGCAAGGCGGGCGGTGTCAG AGCTAAAGAATCCTTCGGTGAGAGGCAAACAATGTGGTGTTGCTCCTAGTCATGACAACG ATACTCTTTTTGTGGGCAATATCTGCAAGACATGGACTAAAGAACATCTGAAGGAGAAAC TCAAGAGTTACGGTGTTGAGAATTTTGATGATCTACTATTAGTTGAGGACAGCAATAATC CAGGAATGAATCGTGGGTATGCTTTACTTGAGTTTTCTACTCGCCCTGAAGCAATGGATG CTTTTAGGCGATTGCAGAAGAGGGATGTAGTTTTTGGAGTTGATCGTAGTGCAAAGGTTT CCTTTGCTGATTCCTACCCCGAAGTTGACGATGAAATAATGGCACAGGTTAGAACTGTAT TTATTGATGGCCTTCCTCCCTCATGGGATGAAGATCGTGTCAAGAAGTACCTTAAAAAAT ATGGAGCTATTGAGAAAGTTGAACTAGCCCGAAATATGCCAGCAGCCAAGAGAAAGGATT TTGGGTTTGTTACTTTTGATACACATGATAATGCTGTTGCATGTGCTGATGGGATAACTA ATTCTGAGATTGGTGAAGGTGACAGCAAGGCAAAAGTGAGAGCCAGATTGTCGAGACCAT TGCAGAGACCTCCTAGAATGAAGCATGGATTAAGAGGAAATTTTAGGGTTGGGCAGGGTG CTCCTCGAGGTGGACGTTTTGCATATGATCGTCCTCCTCCACTTCGCCGGCCTCCACCTC GTCTTTTAAGACCCGATGTTAGTCGCTTACCACCACCGGTCAGGAGCCGCCCACTGAAGA GGCCAGTAGATATTAGAGATAGGCGCCCTGTTATGTCAATACCAGATAGAGTTAGGCGTT TGCCTCCACCCGAGAGATCATATGACAGAAGGCCCCCAGCTCCTGTGTACCCAAAGAGAA GCCCAAGGAGAGAATATGGAAGGCGTGATGAACTTCCTCCGCCAAGAAGCAGAGCTACCT TTGGTGACTATAGTTCAAGAGTTCCAGTGGATAGACGCCCCTATAGGGATGATTATTCAC CCCGGGGGTCAGCCTATTCGGACCTAGGTCCTCGTAGTGCTCCCCGCCTTTCTGATAGGC GAGCATATATTGATGATGGTTATGGAGGGAAGATTGACCGTCCTTTACCAACATATAGGG AGGGCCGTGGTCGTGATTATGATACAATGTCTGGTTCAAAACGCTCATATGCTGAGATGG ATGATGTGCCACCTCGATATCATGACATTAGTGTTCGTCAGTCTAAGGCACGCTTAGACT ATGATGTTGGTGGCAGCAGTGCCCGGTATGCAGATACATATAGCGAGAGGCTTGGACGAT CACATGCGGGATACAGTGGTGGCAGATCTGTCTCTGGTCATGATCCAGTGTACAGTAGTG GTCGGCATGGCATGAGTTATGGAGGTTCCGCAAGCAGTAATGATGCTGGTGGAATGTACT CATCAAATTTCAGTGGTAGCTACATGTCTCGTGGGTCTGATGTTGGTGGAAGTTCATATT CATCACTTTACTCAGGGCGTAATGTAGGTAGCAGCAGTGGCTACTATGGCGGTAGTGGTT CTAGTTCATATTACTGAGATTTTGCATCATATCGTCTATGGAACACACATGGCACCGTAG GAGGTTGGTGTAGGCCCCGGATTGTATGGAGCTCCTTAATTTAAGGCCTACGGACCTGGA CAAGAAGTGGCAATTGTGTGTGGTGCTCCTGAATTAGACATGATCAAAGAAGTCAGAAAC ACCAAGTTGGTTAAAGCAATAGTCTTGTGGATGTTCTGGCTAGTTTCTTTAATGTAAGGC TTTGCTTTATTTGGTCAAGAATTGTGAACATAATCGCCAGCTATGGTATCTTGGCATGTT TACTTCCAGTGTTTCTAAACATTTTTGAGAGATATGGAGTGTTTCAGTAAAATAGTATTA TGAGGTAGTTCCCTG