Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0542800-01
CDS Infomation	cds chromosome:IRGSP-1.0:4:27183978:27187746:-1 gene:Os04g0542800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:YELLOW STRIP-LIKE GENE 16 description:Transporter of the Copper-Nicotianamine Complex, Fe(III)-deoxymugineic acid transporter, Copper distribution, Allocation of iron (Os04t0542800-01)
Sequence	ATGGACCGCCACGCGCTGGGCGGCGGTGGCGCGCTGGAGATCGAGAAGACGCCGGAGGCG GCGGAGGACATGGAGTCGGAGCCCGCGCTGGCGGCGGCGCGCGAGGCGGAGCGCGTCCCG CCGTGGCGGGAGCAGGTGACCGCCCGCGGGATGGTGGCGGCGCTGCTGATCGGCGTGGTG TACACGGTGATCGTGATGAAGCTGAGCCTCACCACGGGGCTCATCCCCACGCTCAACGTC TCCGCCGCGCTGCTCGCCTTCCTCGCGCTCCGGGGATGGACGCACGCGCTCGACCGCCTC GGCATTGCCTCCCGCCCCTTCACCCGCCAGGAGAACACCGTCATCCAGACCTGCGCCGTC GCCTGCTACACCATCGGCTACGGCGGTGGATTCGGGTCGTTCTTGCTGGGGCTGAACAAG AAGACGTACGAGCTGTCCGGCGCGAGCACGCCGGGGAACGTGCCGGGGAGCTACAAGGAG CCCGGGATCGGGTGGATGACGGGGTTCCTCCTCTCCACCAGCTTCGTGGGGCTCCTCACC TTGCTCCCTCTCCGAAAGGTGCTGGTCATCGACTACAAGCTAACATATCCAAGTGGGACA GCGACTGCTGTTCTCATAAACGGGTTTCACACGCCTCAAGGAGATAAGAATGCGAAAAAG CAAGTCCGTGGATTCCTCAGGTATTTCGGCATCAGCTTCTTGTGGAGCTTCTTCCAGTGG TTCTACACCGGCGGTGACGTCTGCGGATTCCTCCAGTTCCCTACCTTTGGGCTGAAAGCT TGGAAACATACATTTTTCTTCGACTTCAGTCTCACGTATGTTGGTGCCGGGATGATCTGT TCTCACCTTGTCAACCTCTCTCTCTTGTTCGGCGCGATCCTCTCCTGGGGAATAATGTGG CCGCTCATCGGCAAGCAGAAGGGGAATTGGTACTCTGCTAAGGCATCTGAAAGTAGCATG TCGGGCCTGTTCGGTTACAAGTCCTTCATCTGCATTGCACTTCTCGTTGGAGATGGCTTC TACAACTTCGTCAAAGTGATCGTTGTCACTCTCAAGAGCGTACGCGAAAGATCAAGGCGC AGGGGTCTTAACAACAGAGTGGCGGACGCGGACACCATGGCGATCGACGACATGCAGCGG AACGAGGTGTTCAACCGGGACAACATCCCGACCTGGATGGCGTACACCGGGTACACGCTG CTCAGCGTCATCGCCGTGGTCCTCATCCCGGTGATGTTCCGGCAGGTGAAGTGGTACTAC GTGATCATCGCGTACCTGCTGGCGCCGGCGCTGGGGTTCTGCAACGCCTACGGCACGGGG CTCACCGACATGAACATGGGGTACAACTACGGCAAGATCGCGCTCTTCATCTTCGCGGCG TGGGCCGGGAAGGACGACGGCGTGGTGGCCGGGCTCGTCGGGTGCGGGCTGGTGAAGCAG CTGGTGCTCATCTCCGCCGACCTGATGCACGACTTCAAGACGGGCCACCTGACGCTGACC TCGCCGCGGTCGATGCTGGTCGGGCAGGTGGTGGGCACGCTGATGGGGTGCGTCGTCGCG CCGCTCACCTTCTTCCTCTTCTACAAGGCGTTCGACGTCGGCGACCCCAACGGGTACTGG AAGGCGCCGTACGCGCTCATCTACCGGAACATGGCCATCATCGGCGTGGAGGGGTTCTCG GCGCTGCCGAGGCACTGCCTGCAGCTGTGCGCGGGGTTCTTCGCGTTCGCGGTGCTCGCC AACCTGGCGCGGGACTTCCTGCCGCGCAGGTACGGGCGGTACATGCCGCTGCCCATGGCC ATGGCCGTGCCGTTCCTCGTCGGCGCCAGCTTCGCCATCGACATGTGCGCCGGCAGCCTC GTGGTGTTCCTCTGGCACAGGTTCGACGGCAAGAGGGCCGCGCTGCTCGTGCCGGCCGTC GCGTCCGGCCTCATCTGCGGCGACGGGATTTGGACGTTCCCTTCGTCGCTGCTCGCGCTG GCCAAGGTCAAGCCACCCATCTGCATGAAGTTCATACCGGGAAACTAG

Peptide Sequence

PEP ID	Os04t0542800-01
PEP Infomation	pep chromosome:IRGSP-1.0:4:27183978:27187746:-1 gene:Os04g0542800 transcript:Os04t0542800-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:YELLOW STRIP-LIKE GENE 16 description:Transporter of the Copper-Nicotianamine Complex, Fe(III)-deoxymugineic acid transporter, Copper distribution, Allocation of iron (Os04t0542800-01)
Sequence	MDRHALGGGGALEIEKTPEAAEDMESEPALAAAREAERVPPWREQVTARGMVAALLIGVV YTVIVMKLSLTTGLIPTLNVSAALLAFLALRGWTHALDRLGIASRPFTRQENTVIQTCAV ACYTIGYGGGFGSFLLGLNKKTYELSGASTPGNVPGSYKEPGIGWMTGFLLSTSFVGLLT LLPLRKVLVIDYKLTYPSGTATAVLINGFHTPQGDKNAKKQVRGFLRYFGISFLWSFFQW FYTGGDVCGFLQFPTFGLKAWKHTFFFDFSLTYVGAGMICSHLVNLSLLFGAILSWGIMW PLIGKQKGNWYSAKASESSMSGLFGYKSFICIALLVGDGFYNFVKVIVVTLKSVRERSRR RGLNNRVADADTMAIDDMQRNEVFNRDNIPTWMAYTGYTLLSVIAVVLIPVMFRQVKWYY VIIAYLLAPALGFCNAYGTGLTDMNMGYNYGKIALFIFAAWAGKDDGVVAGLVGCGLVKQ LVLISADLMHDFKTGHLTLTSPRSMLVGQVVGTLMGCVVAPLTFFLFYKAFDVGDPNGYW KAPYALIYRNMAIIGVEGFSALPRHCLQLCAGFFAFAVLANLARDFLPRRYGRYMPLPMA MAVPFLVGASFAIDMCAGSLVVFLWHRFDGKRAALLVPAVASGLICGDGIWTFPSSLLAL AKVKPPICMKFIPGN

Transcript Sequence

Transcript ID	Os04t0542800-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:27183978:27187746:-1 gene:Os04g0542800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:YELLOW STRIP-LIKE GENE 16 description:Transporter of the Copper-Nicotianamine Complex, Fe(III)-deoxymugineic acid transporter, Copper distribution, Allocation of iron (Os04t0542800-01)
Sequence	GTGGTGGCGTTCGTCTGATCGTCGTCTCCGAGCGGTGCTGCTGTTTTCGCAGGGAGGACA GTACAGCCGCCGCGGCCACCGGTGCCGCCGCCGACGTCTCGGAGCTCGAGCTGCTAGTCC CCAGGGGGGGCGCCTCGTCGGGTGCGGCCGGCAGCATGGACCGCCACGCGCTGGGCGGCG GTGGCGCGCTGGAGATCGAGAAGACGCCGGAGGCGGCGGAGGACATGGAGTCGGAGCCCG CGCTGGCGGCGGCGCGCGAGGCGGAGCGCGTCCCGCCGTGGCGGGAGCAGGTGACCGCCC GCGGGATGGTGGCGGCGCTGCTGATCGGCGTGGTGTACACGGTGATCGTGATGAAGCTGA GCCTCACCACGGGGCTCATCCCCACGCTCAACGTCTCCGCCGCGCTGCTCGCCTTCCTCG CGCTCCGGGGATGGACGCACGCGCTCGACCGCCTCGGCATTGCCTCCCGCCCCTTCACCC GCCAGGAGAACACCGTCATCCAGACCTGCGCCGTCGCCTGCTACACCATCGGCTACGGCG GTGGATTCGGGTCGTTCTTGCTGGGGCTGAACAAGAAGACGTACGAGCTGTCCGGCGCGA GCACGCCGGGGAACGTGCCGGGGAGCTACAAGGAGCCCGGGATCGGGTGGATGACGGGGT TCCTCCTCTCCACCAGCTTCGTGGGGCTCCTCACCTTGCTCCCTCTCCGAAAGGTGCTGG TCATCGACTACAAGCTAACATATCCAAGTGGGACAGCGACTGCTGTTCTCATAAACGGGT TTCACACGCCTCAAGGAGATAAGAATGCGAAAAAGCAAGTCCGTGGATTCCTCAGGTATT TCGGCATCAGCTTCTTGTGGAGCTTCTTCCAGTGGTTCTACACCGGCGGTGACGTCTGCG GATTCCTCCAGTTCCCTACCTTTGGGCTGAAAGCTTGGAAACATACATTTTTCTTCGACT TCAGTCTCACGTATGTTGGTGCCGGGATGATCTGTTCTCACCTTGTCAACCTCTCTCTCT TGTTCGGCGCGATCCTCTCCTGGGGAATAATGTGGCCGCTCATCGGCAAGCAGAAGGGGA ATTGGTACTCTGCTAAGGCATCTGAAAGTAGCATGTCGGGCCTGTTCGGTTACAAGTCCT TCATCTGCATTGCACTTCTCGTTGGAGATGGCTTCTACAACTTCGTCAAAGTGATCGTTG TCACTCTCAAGAGCGTACGCGAAAGATCAAGGCGCAGGGGTCTTAACAACAGAGTGGCGG ACGCGGACACCATGGCGATCGACGACATGCAGCGGAACGAGGTGTTCAACCGGGACAACA TCCCGACCTGGATGGCGTACACCGGGTACACGCTGCTCAGCGTCATCGCCGTGGTCCTCA TCCCGGTGATGTTCCGGCAGGTGAAGTGGTACTACGTGATCATCGCGTACCTGCTGGCGC CGGCGCTGGGGTTCTGCAACGCCTACGGCACGGGGCTCACCGACATGAACATGGGGTACA ACTACGGCAAGATCGCGCTCTTCATCTTCGCGGCGTGGGCCGGGAAGGACGACGGCGTGG TGGCCGGGCTCGTCGGGTGCGGGCTGGTGAAGCAGCTGGTGCTCATCTCCGCCGACCTGA TGCACGACTTCAAGACGGGCCACCTGACGCTGACCTCGCCGCGGTCGATGCTGGTCGGGC AGGTGGTGGGCACGCTGATGGGGTGCGTCGTCGCGCCGCTCACCTTCTTCCTCTTCTACA AGGCGTTCGACGTCGGCGACCCCAACGGGTACTGGAAGGCGCCGTACGCGCTCATCTACC GGAACATGGCCATCATCGGCGTGGAGGGGTTCTCGGCGCTGCCGAGGCACTGCCTGCAGC TGTGCGCGGGGTTCTTCGCGTTCGCGGTGCTCGCCAACCTGGCGCGGGACTTCCTGCCGC GCAGGTACGGGCGGTACATGCCGCTGCCCATGGCCATGGCCGTGCCGTTCCTCGTCGGCG CCAGCTTCGCCATCGACATGTGCGCCGGCAGCCTCGTGGTGTTCCTCTGGCACAGGTTCG ACGGCAAGAGGGCCGCGCTGCTCGTGCCGGCCGTCGCGTCCGGCCTCATCTGCGGCGACG GGATTTGGACGTTCCCTTCGTCGCTGCTCGCGCTGGCCAAGGTCAAGCCACCCATCTGCA TGAAGTTCATACCGGGAAACTAGCCAATGCATCGCTGTAATTTACAGCGTCAATGCAGAC GTATAGATCGTAAAAAAAGAGATCGTATAGACGTATAGCGTCAATGCAGAAACACTAGAA AAGAGATCGTGTATCGAGCGTTTTGGACTTAGATTTAAGATTTAGGCGCAGCGAGAGGAA GAACGGGTGTAGCTATGACGGATAAATCCCCAAAAGCAGAAATGCTGTTCATAGGGGTTG GGGTTCTGTACTGTGTATATCAGTTGAGAAGAAAATTAGATGAAAACACAACAATTAGTT GTGCTTATTG