Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0541500-01
CDS Infomation	cds chromosome:IRGSP-1.0:4:27111204:27118461:1 gene:Os04g0541500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:long-chain base kinase 2 description:Long-chain base kinase, Regulation of disease resistance response and programmed cell death (PCD) (Os04t0541500-01)
Sequence	ATGGAAGTAGCTGATCTAGAAAATCCTACTTCCAGAAGCTCATCCCAGAAGTCCAGTCGG CGGTCTGGTAGTCGGCGTTCTCAAAAGTCAGCCGGGCAACAATCTTCACCAACTGTATTT CCAGAGAAAAAAGGCAAATCAAAATCTTCGAGGCAGAAACACTTGGTTTTTGACAATAAA GATTCCAAGAAAGCAAAAAATAATGAGCAAAAAAATGATGTGGTGGATGAGAAGTCTAAT TTCTCAGGTTATGAAATCTATTCTGGAAAACTCTTTTTTGACAAGAAAAATAGAATTACA GGAGATCAAATTTCAGCAAATGGGAAAGCTGATATAAGTGATGTAAGACTCACAAGTAAA GCCCTAATATGGGGTTCTTCTTTACTCAGTCTTGAGGATGTCATCTCTGTATCTTACAGT TCTGGTGTCCAACATTTCATTGTGCATGCATACCCTTCTAAGAAGTATTTGTTTGGAAAG ACACACAGAGTACGGAAGGACCTCCGGTTTATAGCCCCTACTGTAGAGGAGGCCATTTCA TGGGTAACATGCTTTGCCGAACAAAACATATATGTTAACATGCTACCTCTCCCTCCAACA TCCAGTACCGAGCAAGACCTTGATGGTCCCCTCAGTGGTGCTTTATTTGACCACCCACCC ATCAAATGTAGAACTCCACCGAGGATACTTGTTATACTGAACCCTCGGTCTGGGCATGGT AGATCATGCAAAGTTTTCCATGACAAAGCAGAACCTATTTTTAAGCTTGCAGGTTTTCAC ATGGAAGTGGTTAAAACTACTCATGCTGGTCACGCTAAATCTCTTGCATCTACATTTGAT TTTAGCGCATTCCCTGATGGAATCGTGTGTGTAGGTGGTGATGGAATTGTAAATGAGGTC TTCAACGGTCTACTCAGTAGAAGTGATAGAGCAGAGGCTGTATCAATTCCAGTTGGAATA ATCCCAGCAGGATCTGACAATTCACTTGTTTGGACTGTTTTGGGAGTTAAAGATCCAATT TCAGCATCATTACTAATTGTGAAGGGTGGCTTTACTGCCCTAGACATCCTGTCTGTTGAG TGGATCCAGTCTGGGCTAATACACTTTGGGACAACTGTTTCATACTATGGTTTTATCAGT GATGTCCTGGAGCTTTCTGAGAAATATCAAAAGAAATTTGGCCCTCTTCGATATTTTGTG GCTGGAATACTCAAATTTTTTTGCCTGCCAAGCTATTTCTATGAGTTAGAGTATCTTCCT TCTTCAAAGGAGATGACTGGCCATGGAAAAGGTATAGGACAAGAAAACTTTGTGTCTGAT GTATATACCAATGTAATGCGCAGCCGATCAAAAAGAGAAGGAATTCCACGAGCTTCCAGT TTGTCAAGTATTGACTCTATTATGACTCCAAGTCGGATGTCACTTGGGGACGTTGATACA TCAGGTAGCACAGCAGCAAGCACTGAACCTTCAGAGTATGTTCGTGGTCTTGATCCAAAA GCAAAACGCCTTTCTTTGGGCAGAAGCAACATTGTTTCAGAACCAGAGGAAGTTTTACAC CCTCAACCACATCATTCATCATTCTGGCCAAGAACCAGGTCCAAAACAAGAACTGAGAGA AATTCAGTTGGTGTCACTACTAACGATACACGATTATCTTGGGCAGCCCCATCAATTCAT GACAAGGAGGACATTTCCTCAACAATTTCAGATCCAGGACCTATTTGGGACTCTGAACCA AAGTGGGACAATGGGCCAAAATGGGATACAGAGCTAACCTGGGAGTCTGACCACCCTATT GAACTCCCTGGACCACCAGAAGACAATGAAATTGGACCATCAGTGGAACTTGTGCCAAAT TTGGATGATAAATGGGTAGTCAGGAAAGGACACTTTCTTGGTGTTCTAGTTTGCAATCAT TCATGCAAGACAGTGCAAAGTTTGAGTTCGCAGGTTATTGCACCAAAAGCCAACCATGAT GACAACACTTTGGACTTGCTCTTAGTTGGTGGAAAGGGTAGATGGAAGTTGTTGAAATTT TTCATACTTCTGCAATTTGGTCGCCATCTTTCTTTGCCTTATGTGGAATATGTGAAGGTA AAGTCTGTCAAGCTTAAACCAGGTGCAAACACGCACAATGGGTGTGGAATAGACGGTGAG CTTTGCCGCGTCAAGGGACATGTACTCTGCTCCCTGTTACAAGAGCAATGCATGCTTATT GGCCGGCAAAGCAGACAATCTACTTAA

Peptide Sequence

PEP ID	Os04t0541500-01
PEP Infomation	pep chromosome:IRGSP-1.0:4:27111204:27118461:1 gene:Os04g0541500 transcript:Os04t0541500-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:long-chain base kinase 2 description:Long-chain base kinase, Regulation of disease resistance response and programmed cell death (PCD) (Os04t0541500-01)
Sequence	MEVADLENPTSRSSSQKSSRRSGSRRSQKSAGQQSSPTVFPEKKGKSKSSRQKHLVFDNK DSKKAKNNEQKNDVVDEKSNFSGYEIYSGKLFFDKKNRITGDQISANGKADISDVRLTSK ALIWGSSLLSLEDVISVSYSSGVQHFIVHAYPSKKYLFGKTHRVRKDLRFIAPTVEEAIS WVTCFAEQNIYVNMLPLPPTSSTEQDLDGPLSGALFDHPPIKCRTPPRILVILNPRSGHG RSCKVFHDKAEPIFKLAGFHMEVVKTTHAGHAKSLASTFDFSAFPDGIVCVGGDGIVNEV FNGLLSRSDRAEAVSIPVGIIPAGSDNSLVWTVLGVKDPISASLLIVKGGFTALDILSVE WIQSGLIHFGTTVSYYGFISDVLELSEKYQKKFGPLRYFVAGILKFFCLPSYFYELEYLP SSKEMTGHGKGIGQENFVSDVYTNVMRSRSKREGIPRASSLSSIDSIMTPSRMSLGDVDT SGSTAASTEPSEYVRGLDPKAKRLSLGRSNIVSEPEEVLHPQPHHSSFWPRTRSKTRTER NSVGVTTNDTRLSWAAPSIHDKEDISSTISDPGPIWDSEPKWDNGPKWDTELTWESDHPI ELPGPPEDNEIGPSVELVPNLDDKWVVRKGHFLGVLVCNHSCKTVQSLSSQVIAPKANHD DNTLDLLLVGGKGRWKLLKFFILLQFGRHLSLPYVEYVKVKSVKLKPGANTHNGCGIDGE LCRVKGHVLCSLLQEQCMLIGRQSRQST

Transcript Sequence

Transcript ID	Os04t0541500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:27111204:27118461:1 gene:Os04g0541500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:long-chain base kinase 2 description:Long-chain base kinase, Regulation of disease resistance response and programmed cell death (PCD) (Os04t0541500-01)
Sequence	GCTCCAAACACAGGAAAACCAGTGCGCGGAGGGGAGAAGAGAAACGAGCGGAGCAAAGAA AGAACAGAGGAAACGGCGGCACCGTCCCTTTCTTTCCACTGGCTTCTCTCCCCTCAACAA CAACAACAACAACAGCGCAGCCGGAACAGCGCCGCCTCGTGTCCGCCACGCCATTTTTTT TCTTCTCCTCCTCTTCCTCGTCTCCTCAGCTGAAAACGCGCACGCCAAAACCCATCGAAC CACCACCCCGGCCCTCCCTCACCCGTCGCCCACCCAATCAACCCCTCCACGGCTCCACCA CACCGCCGCGTCCGCGTCCTCCTCCTCCTACCACCACCACCGCCTCGCCTCCTGCCCCGC CGTCAACCGCGAGAGCTCGCGCCGCCGGCCGACGTGAGTCCGGAGGCGTTCGATCTGCTG CCGGCGGCGGGGTGGACCGAGGGCCGCGTCCTCAGCTGGTTCCGCCTCCCGATCCGATCG TTTCCAGTGGGGGGGCGCCGAATTCGGCTATTTTTAGTTGTTAGCAACTTTGACATGGCA TTGATGCCATGATCATACACCTATGAGGTCATGCCAAATTCCTGATCTATACTGATGCTC TGAAGTCCTCTTTAAAAGAAAGAGATGGAAGTAGCTGATCTAGAAAATCCTACTTCCAGA AGCTCATCCCAGAAGTCCAGTCGGCGGTCTGGTAGTCGGCGTTCTCAAAAGTCAGCCGGG CAACAATCTTCACCAACTGTATTTCCAGAGAAAAAAGGCAAATCAAAATCTTCGAGGCAG AAACACTTGGTTTTTGACAATAAAGATTCCAAGAAAGCAAAAAATAATGAGCAAAAAAAT GATGTGGTGGATGAGAAGTCTAATTTCTCAGGTTATGAAATCTATTCTGGAAAACTCTTT TTTGACAAGAAAAATAGAATTACAGGAGATCAAATTTCAGCAAATGGGAAAGCTGATATA AGTGATGTAAGACTCACAAGTAAAGCCCTAATATGGGGTTCTTCTTTACTCAGTCTTGAG GATGTCATCTCTGTATCTTACAGTTCTGGTGTCCAACATTTCATTGTGCATGCATACCCT TCTAAGAAGTATTTGTTTGGAAAGACACACAGAGTACGGAAGGACCTCCGGTTTATAGCC CCTACTGTAGAGGAGGCCATTTCATGGGTAACATGCTTTGCCGAACAAAACATATATGTT AACATGCTACCTCTCCCTCCAACATCCAGTACCGAGCAAGACCTTGATGGTCCCCTCAGT GGTGCTTTATTTGACCACCCACCCATCAAATGTAGAACTCCACCGAGGATACTTGTTATA CTGAACCCTCGGTCTGGGCATGGTAGATCATGCAAAGTTTTCCATGACAAAGCAGAACCT ATTTTTAAGCTTGCAGGTTTTCACATGGAAGTGGTTAAAACTACTCATGCTGGTCACGCT AAATCTCTTGCATCTACATTTGATTTTAGCGCATTCCCTGATGGAATCGTGTGTGTAGGT GGTGATGGAATTGTAAATGAGGTCTTCAACGGTCTACTCAGTAGAAGTGATAGAGCAGAG GCTGTATCAATTCCAGTTGGAATAATCCCAGCAGGATCTGACAATTCACTTGTTTGGACT GTTTTGGGAGTTAAAGATCCAATTTCAGCATCATTACTAATTGTGAAGGGTGGCTTTACT GCCCTAGACATCCTGTCTGTTGAGTGGATCCAGTCTGGGCTAATACACTTTGGGACAACT GTTTCATACTATGGTTTTATCAGTGATGTCCTGGAGCTTTCTGAGAAATATCAAAAGAAA TTTGGCCCTCTTCGATATTTTGTGGCTGGAATACTCAAATTTTTTTGCCTGCCAAGCTAT TTCTATGAGTTAGAGTATCTTCCTTCTTCAAAGGAGATGACTGGCCATGGAAAAGGTATA GGACAAGAAAACTTTGTGTCTGATGTATATACCAATGTAATGCGCAGCCGATCAAAAAGA GAAGGAATTCCACGAGCTTCCAGTTTGTCAAGTATTGACTCTATTATGACTCCAAGTCGG ATGTCACTTGGGGACGTTGATACATCAGGTAGCACAGCAGCAAGCACTGAACCTTCAGAG TATGTTCGTGGTCTTGATCCAAAAGCAAAACGCCTTTCTTTGGGCAGAAGCAACATTGTT TCAGAACCAGAGGAAGTTTTACACCCTCAACCACATCATTCATCATTCTGGCCAAGAACC AGGTCCAAAACAAGAACTGAGAGAAATTCAGTTGGTGTCACTACTAACGATACACGATTA TCTTGGGCAGCCCCATCAATTCATGACAAGGAGGACATTTCCTCAACAATTTCAGATCCA GGACCTATTTGGGACTCTGAACCAAAGTGGGACAATGGGCCAAAATGGGATACAGAGCTA ACCTGGGAGTCTGACCACCCTATTGAACTCCCTGGACCACCAGAAGACAATGAAATTGGA CCATCAGTGGAACTTGTGCCAAATTTGGATGATAAATGGGTAGTCAGGAAAGGACACTTT CTTGGTGTTCTAGTTTGCAATCATTCATGCAAGACAGTGCAAAGTTTGAGTTCGCAGGTT ATTGCACCAAAAGCCAACCATGATGACAACACTTTGGACTTGCTCTTAGTTGGTGGAAAG GGTAGATGGAAGTTGTTGAAATTTTTCATACTTCTGCAATTTGGTCGCCATCTTTCTTTG CCTTATGTGGAATATGTGAAGGTAAAGTCTGTCAAGCTTAAACCAGGTGCAAACACGCAC AATGGGTGTGGAATAGACGGTGAGCTTTGCCGCGTCAAGGGACATGTACTCTGCTCCCTG TTACAAGAGCAATGCATGCTTATTGGCCGGCAAAGCAGACAATCTACTTAAGTGCTGTAA AATTAGTTGAATTTCGAGTTTTTGAGGCACTGTATTTTCTGTTTCCACTTCGAACAACTG ATTTTTTTTTCTTTTGAGTTGTCTATATTTCGCTACTTGCTAATGGGGTGTGTGAGTGGG TTCAGAACGTGCAGACCTCGAGAATTTGGACTGAACAAACAATGCTGTGATGCTTCTGTA TATTCGAGTGATTATAGGAGAATACCTTGATTCTTTTC