Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os04t0541100-01
CDS Infomation

cds chromosome:IRGSP-1.0:4:27078042:27080294:-1 gene:Os04g0541100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:a DNA binding protein. a transcriptional activator. description:Similar to Gt-2. (Os04t0541100-01)
Sequence

AAGCTCGCGGAGTTGGGCTACAAGAGAAGCGCCAAGAAGTGCAAGGAGAAGTTTGAGAAC
GTCCACAAGTACTACAAGCGCACCAAGGAAGGGCGCGCCGGGAGGCAGGACGGCAAGAGC
TACCGCTTCTTCACTGAGCTGGAGGCGTTGCATGCCGCTGCGCCGCAGACGCCCCAGCCG
CAGCAGCAGCAGCAGCAGCAGTTGCCGCCGGTTACAAGCAGCGCACCCGCGATGCACGCC
TTCGCGCCGCCGGTTCCCGCGCCACCGCCGATGAGCGCAATGCCACCGCCGCCGGGGCCG
ATCCAGCCGGCCCCGATATCTTCTGCGGCTCCCGCGGTGCCCCTGGAGCTGCCGCCGCAG
CCGCCCATCAACCTGCAAGGCTTAAGCTTCTCGTCCATGTCGGGGTCCGAGTCGGACGAT
GAGTCTGAAGACGACGAGATGACGGCGGAGACCGGCGGCAGCCAGGACCGCCTCGGCAAG
CGCAAGCGAGGCGCCGGCGGCAAAAGGCTGGCGACTTTCTTCGAGGGGCTCATCAAGCAA
GTCGTCGACAGGCAGGAGGAGATGCAGCGGCGGTTTCTGGAGACTATGGAGAAGCGAGAG
GCGGAGCGCACGGCGCGGGAGGAGGCGTGGCGCAGGCAGGAGGTGGCCCGCCTCAACCGC
GAGCAGGAGCAGCTCGCCCAGGAGCGCGCCGCGGCGGCCTCCCGCGACGCCGCCATCATC
TCCTTCCTCCAACGCATCGGCGGTCAGTCCGTACAGGTCCCACCCGCCGCCACCGTCATC
CAGATGCCCACACCGGTGCAGCTCCAGACCCCTCCGCCGGTCAAGCAACCTGCCAGGCAG
CACCAGCCACAGCCAACGCCGCCGCCGCCGCAGGCGGCGCCAATCCCGGCCGCGCCCCTC
CAGCAGCAACCGCCGCAGCCGCAGCACAAGGAGACGATTCACCACGAGGCAGTGACGCCG
CGCAGGGCGCCACCGACGTCCGGCTCATCACTCGAGCTGGTGCCCGCGGCGGAGCAGCAC
GTCGAGAGCGGGCTAGGAGGAGGGGAGGGCGGGTCGGCGTCGTCGTCGCGGTGGCCCAAG
ACGGAGGTGCAGGCACTCATACAGCTGCGCATGGAGCTCGATATGCGCTACCAGGAGACC
GGGCCGAAGGGCCCGCTCTGGGAGGAGATCTCGTCGGGGATGCGGCGGCTGGGGTACAAC
CGGAGCTCGAAGCGGTGCAAGGAGAAGTGGGAGAACATCAACAAGTACTTCAAGAAGGTG
AAGGAGAGCAACAAGAAGCGGCCCGAGGACTCCAAGACATGCCCGTACTTCCACCAGCTC
GACGTCATCTACCGCAGGAAGCACCTCACCGGCGGTGGCGGCGGCGGCGCTTCCGCGGCC
AATGTCGCCGCCACGGCAATCGAGCACCAGAACCCGAACCGGCACGAGATAGAGGGGAAG
AACATAAACGACAACGACAAGAGGAAGAACGGCGGAGGCGGCGGCGCGCAGGTGCCCACC
AGCAATGGCGACACGGCACCGACCACGGCCACGTTCGACGTCGATAGCGGCATGAAGAAG
CCAGAAGACATTGTGAGGGAGCTGAGCGAGCAGCCGCCCCGGGAGTTCACAACGGACGAG
ACCGACAGTGACGACATGGGCGATGACTACACCGACGACGGCGAGGAAGGCGAGGACGAC
GGCAAAATGCAGTACAGGATACAGTTCCAGAGGCCGAACCCGGGCGGCGCCAACACCGCA
CCTCCGCCGGCGACAACCCCGGCGTCCGCGGTGCCAACCTCGACTCCGACGAGCACCTTC
CTCGCCATGGTTCAATAG

Peptide Sequence

PEP ID

Os04t0541100-01
PEP Infomation

pep chromosome:IRGSP-1.0:4:27078042:27080294:-1 gene:Os04g0541100 transcript:Os04t0541100-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:a DNA binding protein. a transcriptional activator. description:Similar to Gt-2. (Os04t0541100-01)
Sequence

KLAELGYKRSAKKCKEKFENVHKYYKRTKEGRAGRQDGKSYRFFTELEALHAAAPQTPQP
QQQQQQQLPPVTSSAPAMHAFAPPVPAPPPMSAMPPPPGPIQPAPISSAAPAVPLELPPQ
PPINLQGLSFSSMSGSESDDESEDDEMTAETGGSQDRLGKRKRGAGGKRLATFFEGLIKQ
VVDRQEEMQRRFLETMEKREAERTAREEAWRRQEVARLNREQEQLAQERAAAASRDAAII
SFLQRIGGQSVQVPPAATVIQMPTPVQLQTPPPVKQPARQHQPQPTPPPPQAAPIPAAPL
QQQPPQPQHKETIHHEAVTPRRAPPTSGSSLELVPAAEQHVESGLGGGEGGSASSSRWPK
TEVQALIQLRMELDMRYQETGPKGPLWEEISSGMRRLGYNRSSKRCKEKWENINKYFKKV
KESNKKRPEDSKTCPYFHQLDVIYRRKHLTGGGGGGASAANVAATAIEHQNPNRHEIEGK
NINDNDKRKNGGGGGAQVPTSNGDTAPTTATFDVDSGMKKPEDIVRELSEQPPREFTTDE
TDSDDMGDDYTDDGEEGEDDGKMQYRIQFQRPNPGGANTAPPPATTPASAVPTSTPTSTF
LAMVQ

Transcript Sequence

Transcript ID

Os04t0541100-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:4:27078042:27080294:-1 gene:Os04g0541100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:a DNA binding protein. a transcriptional activator. description:Similar to Gt-2. (Os04t0541100-01)
Sequence

AATCTCCCTTCTGCATATACAGCACCCTCCTCCTTGCCTCCTCTTCGCCATTGTCCTAAT
TCCCATCTCCTTGTCCCTTTCTCCCCGGGAGAAAAACCACTCATACGCAGTCGGCCAAGC
ACTTGATGCTTACTATGCCTCTGCGTTAGATGCTTCTCCTGCCCGTAGAAGCTCGCGGAG
TTGGGCTACAAGAGAAGCGCCAAGAAGTGCAAGGAGAAGTTTGAGAACGTCCACAAGTAC
TACAAGCGCACCAAGGAAGGGCGCGCCGGGAGGCAGGACGGCAAGAGCTACCGCTTCTTC
ACTGAGCTGGAGGCGTTGCATGCCGCTGCGCCGCAGACGCCCCAGCCGCAGCAGCAGCAG
CAGCAGCAGTTGCCGCCGGTTACAAGCAGCGCACCCGCGATGCACGCCTTCGCGCCGCCG
GTTCCCGCGCCACCGCCGATGAGCGCAATGCCACCGCCGCCGGGGCCGATCCAGCCGGCC
CCGATATCTTCTGCGGCTCCCGCGGTGCCCCTGGAGCTGCCGCCGCAGCCGCCCATCAAC
CTGCAAGGCTTAAGCTTCTCGTCCATGTCGGGGTCCGAGTCGGACGATGAGTCTGAAGAC
GACGAGATGACGGCGGAGACCGGCGGCAGCCAGGACCGCCTCGGCAAGCGCAAGCGAGGC
GCCGGCGGCAAAAGGCTGGCGACTTTCTTCGAGGGGCTCATCAAGCAAGTCGTCGACAGG
CAGGAGGAGATGCAGCGGCGGTTTCTGGAGACTATGGAGAAGCGAGAGGCGGAGCGCACG
GCGCGGGAGGAGGCGTGGCGCAGGCAGGAGGTGGCCCGCCTCAACCGCGAGCAGGAGCAG
CTCGCCCAGGAGCGCGCCGCGGCGGCCTCCCGCGACGCCGCCATCATCTCCTTCCTCCAA
CGCATCGGCGGTCAGTCCGTACAGGTCCCACCCGCCGCCACCGTCATCCAGATGCCCACA
CCGGTGCAGCTCCAGACCCCTCCGCCGGTCAAGCAACCTGCCAGGCAGCACCAGCCACAG
CCAACGCCGCCGCCGCCGCAGGCGGCGCCAATCCCGGCCGCGCCCCTCCAGCAGCAACCG
CCGCAGCCGCAGCACAAGGAGACGATTCACCACGAGGCAGTGACGCCGCGCAGGGCGCCA
CCGACGTCCGGCTCATCACTCGAGCTGGTGCCCGCGGCGGAGCAGCACGTCGAGAGCGGG
CTAGGAGGAGGGGAGGGCGGGTCGGCGTCGTCGTCGCGGTGGCCCAAGACGGAGGTGCAG
GCACTCATACAGCTGCGCATGGAGCTCGATATGCGCTACCAGGAGACCGGGCCGAAGGGC
CCGCTCTGGGAGGAGATCTCGTCGGGGATGCGGCGGCTGGGGTACAACCGGAGCTCGAAG
CGGTGCAAGGAGAAGTGGGAGAACATCAACAAGTACTTCAAGAAGGTGAAGGAGAGCAAC
AAGAAGCGGCCCGAGGACTCCAAGACATGCCCGTACTTCCACCAGCTCGACGTCATCTAC
CGCAGGAAGCACCTCACCGGCGGTGGCGGCGGCGGCGCTTCCGCGGCCAATGTCGCCGCC
ACGGCAATCGAGCACCAGAACCCGAACCGGCACGAGATAGAGGGGAAGAACATAAACGAC
AACGACAAGAGGAAGAACGGCGGAGGCGGCGGCGCGCAGGTGCCCACCAGCAATGGCGAC
ACGGCACCGACCACGGCCACGTTCGACGTCGATAGCGGCATGAAGAAGCCAGAAGACATT
GTGAGGGAGCTGAGCGAGCAGCCGCCCCGGGAGTTCACAACGGACGAGACCGACAGTGAC
GACATGGGCGATGACTACACCGACGACGGCGAGGAAGGCGAGGACGACGGCAAAATGCAG
TACAGGATACAGTTCCAGAGGCCGAACCCGGGCGGCGCCAACACCGCACCTCCGCCGGCG
ACAACCCCGGCGTCCGCGGTGCCAACCTCGACTCCGACGAGCACCTTCCTCGCCATGGTT
CAATAGGCGCGCGAACGATGCATCACCAAGTACGTACTTGTTC