Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0538000-01
CDS Infomation	cds chromosome:IRGSP-1.0:4:26913320:26916717:1 gene:Os04g0538000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tetratricopeptide TPR-1 domain containing protein. (Os04t0538000-01);Hypothetical gene. (Os04t0538000-02)
Sequence	GTCCAAACACGCACCAAGCCACCAACCGATTCCGATCCAACGATCTCGATCGCCCGCTCC GCTTCGCTTCCCGATCGATCAGCCCCGCCGCCGCGCGCGATGGCCGACGAGGCGAAGGCC AAGGGCAACGCCGCGTTCTCCGCCGGCCGCTTCGAGGAGGCGGCGGCGCACTTCACCGAC GCCATCGCGCTCGCGCCCGACAACCACGTCCTCTACTCCAACCGATCGGCGGCCTACGCC TCGCTCCACCGCTACCCGGAGGCGCTCGCCGACGCCGAGAGGACCGTCGCGCTCAGGCCC GACTGGGCCAAGGGTTGCTCCCGCCTCGGCGCCGCGCGCCTCGGCCTCGGCGACGCCGCG GGCGCCGTGGCGGCCTACGAGAAGGGGCTCGCCCTCGAGCCGTCGAACGGGGCACTCAAG GACGGCCTCGCCCATGCCCGCCAGGCGCGCCGCCCGGCGCCGGCGTCCGGCGCCGGCGCC ATCGGCAAGGTGTTCCAGGGCCCCGAGCTCTGGAGCAGGATGGCCGCCGACCCCACCACG CGCCCCTACCTCGACCAGCCGGATTTCATGCGGATGCTGCGCGACGTGCAGCGGAATCCC AGCAGCCTCAACAACTACCTCTCCGATCCCCGGATGGTCCAGGTGCTCAGCCTCATGCTT AACCTCAGGCTACCGAACAATGACGCGCCTCCGCGGCCGCCGGCGCAGTCGACTCCGCCG CCTCCGCCGCAGCAGCAGCAGCACCAGCCGGAGACGAAGGCGAGGGAACCTGAACCCGAG CCCGAGCCGATGGAGGTGACAGAGGAGGAGAAGGAGCGGAAGGAAAGGAAGGCCGCAGCG CAGGAGGAGAAAGAAGCGGGCAACGCCGCTTACAAGAAGGATTTTGAGACGGCGATCCAA CACTACACAAAAGCCATGGAGCTCGACGATGAGGACGTCTCCTACCTCACCAACCGAGCC GCCGTTTACCTTGAGATGGGAAAGTATGATGAGTGCATCAACGACTGTGATAAGGCTGTT GAGAGGGGAAGGGAACTTCATGCTGATTTCAAGATCATCTCTAGGGCACTGACCAGAAAG GGAACTGCTCTTGCTAAGATTGCTAAGTGCTTCAAAGATTATGATGTTGCCATTGAGACT TACCAAAAGGCTCTGACTGAGCACAGAAACCCAGATACCCTGAAGAAACTGAATGATGCT GAAATAGCAAAGAAGGAGCTAGAGCAGCAAGAGTACTATGATCCAAAAATAGCTGATGAG GAGCGAGAGAAAGGTAATGAATTCTTCAAGCAGCAGAAATACCCAGAAGCAGTGAAGCAT TACAGTGAAGCTCTCAGGAGAAACCCCAAGGATCCAAGGGTATACAGCAACAGGGCCGCC TGTTATACCAAGCTTGGAGCAATGCCTGAAGGTCTCAAAGATGCTGAAAAATGCATTGAA CTAGATCCTACATTCTCCAAGGGATACACAAGGAAAGGTGCAATCCAATTTTTCATGAAA GAATATGACAAAGCACTGGAAACCTATCAGGCCGGCCTAAAGCATGACCCGAACAACCAG GAGTTGCTTGATGGTGTTAGGAGATGTGTCCAGCGGATCAACAAGGCTAGCAGAGGGGAA CTGAGCCAGGAGGAATTGCAAGAAAGACAGAACAAGGCTATGCAGGACCCAGAAATCCAG AACATTCTGAAGGATCCTATCATGCAGCAGGTGTTGACCGACTTCCAGGAGAATCCGAAG GCTGCTCAGGCGCATCTCAAGAACCCCGGAGTGATGCAGAAGATCCAGAAGCTAGTAAGT GCAGGGATAGTCCAAATGAAGTAG

Peptide Sequence

PEP ID	Os04t0538000-01
PEP Infomation	pep chromosome:IRGSP-1.0:4:26913320:26916717:1 gene:Os04g0538000 transcript:Os04t0538000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tetratricopeptide TPR-1 domain containing protein. (Os04t0538000-01);Hypothetical gene. (Os04t0538000-02)
Sequence	VQTRTKPPTDSDPTISIARSASLPDRSAPPPRAMADEAKAKGNAAFSAGRFEEAAAHFTD AIALAPDNHVLYSNRSAAYASLHRYPEALADAERTVALRPDWAKGCSRLGAARLGLGDAA GAVAAYEKGLALEPSNGALKDGLAHARQARRPAPASGAGAIGKVFQGPELWSRMAADPTT RPYLDQPDFMRMLRDVQRNPSSLNNYLSDPRMVQVLSLMLNLRLPNNDAPPRPPAQSTPP PPPQQQQHQPETKAREPEPEPEPMEVTEEEKERKERKAAAQEEKEAGNAAYKKDFETAIQ HYTKAMELDDEDVSYLTNRAAVYLEMGKYDECINDCDKAVERGRELHADFKIISRALTRK GTALAKIAKCFKDYDVAIETYQKALTEHRNPDTLKKLNDAEIAKKELEQQEYYDPKIADE EREKGNEFFKQQKYPEAVKHYSEALRRNPKDPRVYSNRAACYTKLGAMPEGLKDAEKCIE LDPTFSKGYTRKGAIQFFMKEYDKALETYQAGLKHDPNNQELLDGVRRCVQRINKASRGE LSQEELQERQNKAMQDPEIQNILKDPIMQQVLTDFQENPKAAQAHLKNPGVMQKIQKLVS AGIVQMK

Transcript Sequence

Transcript ID	Os04t0538000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:26913320:26916717:1 gene:Os04g0538000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tetratricopeptide TPR-1 domain containing protein. (Os04t0538000-01);Hypothetical gene. (Os04t0538000-02)
Sequence	GTCCAAACACGCACCAAGCCACCAACCGATTCCGATCCAACGATCTCGATCGCCCGCTCC GCTTCGCTTCCCGATCGATCAGCCCCGCCGCCGCGCGCGATGGCCGACGAGGCGAAGGCC AAGGGCAACGCCGCGTTCTCCGCCGGCCGCTTCGAGGAGGCGGCGGCGCACTTCACCGAC GCCATCGCGCTCGCGCCCGACAACCACGTCCTCTACTCCAACCGATCGGCGGCCTACGCC TCGCTCCACCGCTACCCGGAGGCGCTCGCCGACGCCGAGAGGACCGTCGCGCTCAGGCCC GACTGGGCCAAGGGTTGCTCCCGCCTCGGCGCCGCGCGCCTCGGCCTCGGCGACGCCGCG GGCGCCGTGGCGGCCTACGAGAAGGGGCTCGCCCTCGAGCCGTCGAACGGGGCACTCAAG GACGGCCTCGCCCATGCCCGCCAGGCGCGCCGCCCGGCGCCGGCGTCCGGCGCCGGCGCC ATCGGCAAGGTGTTCCAGGGCCCCGAGCTCTGGAGCAGGATGGCCGCCGACCCCACCACG CGCCCCTACCTCGACCAGCCGGATTTCATGCGGATGCTGCGCGACGTGCAGCGGAATCCC AGCAGCCTCAACAACTACCTCTCCGATCCCCGGATGGTCCAGGTGCTCAGCCTCATGCTT AACCTCAGGCTACCGAACAATGACGCGCCTCCGCGGCCGCCGGCGCAGTCGACTCCGCCG CCTCCGCCGCAGCAGCAGCAGCACCAGCCGGAGACGAAGGCGAGGGAACCTGAACCCGAG CCCGAGCCGATGGAGGTGACAGAGGAGGAGAAGGAGCGGAAGGAAAGGAAGGCCGCAGCG CAGGAGGAGAAAGAAGCGGGCAACGCCGCTTACAAGAAGGATTTTGAGACGGCGATCCAA CACTACACAAAAGCCATGGAGCTCGACGATGAGGACGTCTCCTACCTCACCAACCGAGCC GCCGTTTACCTTGAGATGGGAAAGTATGATGAGTGCATCAACGACTGTGATAAGGCTGTT GAGAGGGGAAGGGAACTTCATGCTGATTTCAAGATCATCTCTAGGGCACTGACCAGAAAG GGAACTGCTCTTGCTAAGATTGCTAAGTGCTTCAAAGATTATGATGTTGCCATTGAGACT TACCAAAAGGCTCTGACTGAGCACAGAAACCCAGATACCCTGAAGAAACTGAATGATGCT GAAATAGCAAAGAAGGAGCTAGAGCAGCAAGAGTACTATGATCCAAAAATAGCTGATGAG GAGCGAGAGAAAGGTAATGAATTCTTCAAGCAGCAGAAATACCCAGAAGCAGTGAAGCAT TACAGTGAAGCTCTCAGGAGAAACCCCAAGGATCCAAGGGTATACAGCAACAGGGCCGCC TGTTATACCAAGCTTGGAGCAATGCCTGAAGGTCTCAAAGATGCTGAAAAATGCATTGAA CTAGATCCTACATTCTCCAAGGGATACACAAGGAAAGGTGCAATCCAATTTTTCATGAAA GAATATGACAAAGCACTGGAAACCTATCAGGCCGGCCTAAAGCATGACCCGAACAACCAG GAGTTGCTTGATGGTGTTAGGAGATGTGTCCAGCGGATCAACAAGGCTAGCAGAGGGGAA CTGAGCCAGGAGGAATTGCAAGAAAGACAGAACAAGGCTATGCAGGACCCAGAAATCCAG AACATTCTGAAGGATCCTATCATGCAGCAGGTGTTGACCGACTTCCAGGAGAATCCGAAG GCTGCTCAGGCGCATCTCAAGAACCCCGGAGTGATGCAGAAGATCCAGAAGCTAGTAAGT GCAGGGATAGTCCAAATGAAGTAGACATGCTGAAAGGGCCAGGGATAGAGTAATCTGATC GGTGTGCCTGGAAACTTCTGAATGCAAAATTCGTCGTCGAATTTTTGTACAGTACAATCG TGTTTATGCAAATTCCGATTGGTCATGGCTGAGCCGAATTTCC