Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0537900-01
CDS Infomation	cds chromosome:IRGSP-1.0:4:26903901:26908676:-1 gene:Os04g0537900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GLUTELIN PRECURSOR 3 description:Seed-type vacuolar processing enzyme (VPE), Glutelin maturation (Os04t0537900-01)
Sequence	ATGGCTGCGCGGTGCTGGGTATGGGGCTTCGTCGTCGCGCTCCTGGCTGTGGCGGCGGCG GCGGATGGGGAGGAGGAGGAGGGGAAGTGGGAGCCGCTGATTCGGATGCCGACGGAGGAA GGGGACGACGCTGAGGCTGCTGCTCCCGCTCCTGCTCCTGCGGCGGCGGATTACGGGGGG ACGAGGTGGGCGGTGCTCGTCGCCGGCTCCTCCGGCTACGGGAACTACCGGCACCAGGCC GATGTGTGCCATGCGTACCAGATTCTGCAGAAGGGAGGAGTGAAGGAGGAGAACATTGTG GTGTTTATGTATGATGACATTGCCCATAACATTCTCAATCCAAGGCCTGGGACCATCATC AACCATCCTAAAGGTGGAGATGTTTATGCTGGTGTTCCAAAGGACTACACTGGTCACCAG GTCACCACTGAGAACTTCTTTGCTGTTCTCTTGGGCAATAAAACCGCAGTTACTGGAGGG AGTGGGAAGGTTATAGACAGCAAACCAGAGGATCACATCTTCATCTATTACTCAGATCAT GGGGGTCCTGGAGTTCTTGGTATGCCTAACCTGCCGTATCTTTATGCTGGTGATTTTATT AAAGTGTTACAAAAGAAACATGCTTCCAACAGCTACTCGAAAATGGTTATATATGTCGAA GCATGTGAAAGTGGCAGTATCTTCGAGGGCTTAATGCCAGAAAATCTTAATATTTATGTC ACAACAGCATCCAATGCAGTTGAGAATAGTTGGGGAACATACTGCCCTGGGGAGGAACCA TCACCTCCTCCTGAATATATTACATGTCTAGGTGACATGTACAGTGTTGCTTGGATGGAG GACAGTGAGACTCATAATCTAAAGAAGGAAACTATCGAGGATCAGTATGAGCTGGTTAAA AAAAGAACATCAAATGCAAATAAGTTAAATGAGGGCTCTCATGTCATGGAATATGGTGAC AAGACATTCAAGGATGAGAAGCTCTTCCTCTATCAAGGTTTTAATCCTGCAAATGGCAAC ATCACAAATGAATTGATTTGGCCAGTACCAAAGGCTACAGTCAATCAAAGAGATGCCGAT CTTCTTTTCATGTGGAAGAGGTATGAGCAGTTGAATGGGGTGTCTGAAGACAAGCTGAGG GCTCTTAGGGAGATAGAAGACACCATAGCACACAGGAAGCATCTTGACAGCAGTATCGAT TTCATCGGGAAGCTTGTGTTTGGTTTTGAAAATGGGCCTTTAGCCCTTGAGGCTGCAAGA AGCTCTGGTCAACCATTAGTCGACAACTGGGATTGTTTGAAGAAGATGGTGCGAATTTTT GAATCTCAATGTGGATCACTCACTCAGTATGGCATGAAATACATGAGAGCATTTGCAAAC ATATGCAACAACGGTGTCTCTGAGGCCAAAATGATGGAAGCAAGTATCAACGCTTGCGGC CGTTACAACTCGGCGAGATGGAGCCCAATGACTGAAGGAGGACACAGTGCTTGA

Peptide Sequence

PEP ID	Os04t0537900-01
PEP Infomation	pep chromosome:IRGSP-1.0:4:26903901:26908676:-1 gene:Os04g0537900 transcript:Os04t0537900-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GLUTELIN PRECURSOR 3 description:Seed-type vacuolar processing enzyme (VPE), Glutelin maturation (Os04t0537900-01)
Sequence	MAARCWVWGFVVALLAVAAAADGEEEEGKWEPLIRMPTEEGDDAEAAAPAPAPAAADYGG TRWAVLVAGSSGYGNYRHQADVCHAYQILQKGGVKEENIVVFMYDDIAHNILNPRPGTII NHPKGGDVYAGVPKDYTGHQVTTENFFAVLLGNKTAVTGGSGKVIDSKPEDHIFIYYSDH GGPGVLGMPNLPYLYAGDFIKVLQKKHASNSYSKMVIYVEACESGSIFEGLMPENLNIYV TTASNAVENSWGTYCPGEEPSPPPEYITCLGDMYSVAWMEDSETHNLKKETIEDQYELVK KRTSNANKLNEGSHVMEYGDKTFKDEKLFLYQGFNPANGNITNELIWPVPKATVNQRDAD LLFMWKRYEQLNGVSEDKLRALREIEDTIAHRKHLDSSIDFIGKLVFGFENGPLALEAAR SSGQPLVDNWDCLKKMVRIFESQCGSLTQYGMKYMRAFANICNNGVSEAKMMEASINACG RYNSARWSPMTEGGHSA

Transcript Sequence

Transcript ID	Os04t0537900-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:26903901:26908676:-1 gene:Os04g0537900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GLUTELIN PRECURSOR 3 description:Seed-type vacuolar processing enzyme (VPE), Glutelin maturation (Os04t0537900-01)
Sequence	GTAGTTTGGCTGCTTGACCTTTGTACTGTGCTTGTGCTGTGGTCGCGGACGACGATGGCT GCGCGGTGCTGGGTATGGGGCTTCGTCGTCGCGCTCCTGGCTGTGGCGGCGGCGGCGGAT GGGGAGGAGGAGGAGGGGAAGTGGGAGCCGCTGATTCGGATGCCGACGGAGGAAGGGGAC GACGCTGAGGCTGCTGCTCCCGCTCCTGCTCCTGCGGCGGCGGATTACGGGGGGACGAGG TGGGCGGTGCTCGTCGCCGGCTCCTCCGGCTACGGGAACTACCGGCACCAGGCCGATGTG TGCCATGCGTACCAGATTCTGCAGAAGGGAGGAGTGAAGGAGGAGAACATTGTGGTGTTT ATGTATGATGACATTGCCCATAACATTCTCAATCCAAGGCCTGGGACCATCATCAACCAT CCTAAAGGTGGAGATGTTTATGCTGGTGTTCCAAAGGACTACACTGGTCACCAGGTCACC ACTGAGAACTTCTTTGCTGTTCTCTTGGGCAATAAAACCGCAGTTACTGGAGGGAGTGGG AAGGTTATAGACAGCAAACCAGAGGATCACATCTTCATCTATTACTCAGATCATGGGGGT CCTGGAGTTCTTGGTATGCCTAACCTGCCGTATCTTTATGCTGGTGATTTTATTAAAGTG TTACAAAAGAAACATGCTTCCAACAGCTACTCGAAAATGGTTATATATGTCGAAGCATGT GAAAGTGGCAGTATCTTCGAGGGCTTAATGCCAGAAAATCTTAATATTTATGTCACAACA GCATCCAATGCAGTTGAGAATAGTTGGGGAACATACTGCCCTGGGGAGGAACCATCACCT CCTCCTGAATATATTACATGTCTAGGTGACATGTACAGTGTTGCTTGGATGGAGGACAGT GAGACTCATAATCTAAAGAAGGAAACTATCGAGGATCAGTATGAGCTGGTTAAAAAAAGA ACATCAAATGCAAATAAGTTAAATGAGGGCTCTCATGTCATGGAATATGGTGACAAGACA TTCAAGGATGAGAAGCTCTTCCTCTATCAAGGTTTTAATCCTGCAAATGGCAACATCACA AATGAATTGATTTGGCCAGTACCAAAGGCTACAGTCAATCAAAGAGATGCCGATCTTCTT TTCATGTGGAAGAGGTATGAGCAGTTGAATGGGGTGTCTGAAGACAAGCTGAGGGCTCTT AGGGAGATAGAAGACACCATAGCACACAGGAAGCATCTTGACAGCAGTATCGATTTCATC GGGAAGCTTGTGTTTGGTTTTGAAAATGGGCCTTTAGCCCTTGAGGCTGCAAGAAGCTCT GGTCAACCATTAGTCGACAACTGGGATTGTTTGAAGAAGATGGTGCGAATTTTTGAATCT CAATGTGGATCACTCACTCAGTATGGCATGAAATACATGAGAGCATTTGCAAACATATGC AACAACGGTGTCTCTGAGGCCAAAATGATGGAAGCAAGTATCAACGCTTGCGGCCGTTAC AACTCGGCGAGATGGAGCCCAATGACTGAAGGAGGACACAGTGCTTGATCCCCGGCTATA TACAGGTAAAATTGAATACCAAAGGCCCCGGAGGTTTGCAGACCTCATTTGTGTGAACTT CTGTATATACCATGGAGACAACAATATAGCTAGCGACCCAACAATATGGCCCCTTGTGTG ATGGCTAATCAGTAGGTGTCATATGCTTGTTGTACCCAACAATATGGCTTGTGTGTGATG TGGCCCTCTGTAAATTACTCGATTAGCAATCGATCCAAGAATGATTATGACCAAATATGT GCATGATGTTGTCTTCAGACTTGATAATAAACAAGTAGGCCAATTATTAGTGGACG