Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0536300-01
CDS Infomation	cds chromosome:IRGSP-1.0:4:26797695:26800253:-1 gene:Os04g0536300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:YABBY 5 description:Transcription factor with zinc finger domain and helix-loop-helix domain (YABBY domain), Leaf development (Os04t0536300-01)
Sequence	ATGATGTCGTCGGCGCCGGAGACGTTCTCGCTGGACCACCTCTCGCAGCATCAGCAGCAG CAGCCGCCGCCGCTCGCCGAGCAGGAGCAGCTCTGCTACGTGCACTGCAACTTCTGCGAC ACCATCCTCGCGGTGGGCGTGCCGTGTAGCAGCCTGTTCAAGACGGTCACCGTGCGGTGC GGCCACTGCGCCAACCTGCTCTCCGTCAACCTCCGCGGCCTCCTGCTCCCGGCCGCCGCC TCCACCGCCAACCAGCTCCCCTTCGGCCAGGCTCTCCTCTCCCCCACCTCACCGCACGGC CTCCTTGATGAGGTGCCGTCATTCCAAGCGCCGGCGAGCCTAATGACCGAACAGGCGAGT CCCAACGTGAGCAGCATCACGAGCAGCAACAGCAGCTGTGCTAACAACGCGCCGGCGACG TCGATGGCGTCGGCGGCCAACAAGGCTACCCAGCGAGAGCCGCAGCAGCCGAAGAACGCG CCGTCAGCCAACAGGACTTCAGAGAAGCGGCAGAGGGTTCCCTCGGCATACAACCGATTC ATCAAAGATGAGATACAACGCATCAAGGCAAGCAATCCGGACATCACCCACAGGGAGGCT TTCAGCGCTGCTGCCAAGAACTGGGCCCATTTCCCACACATCCATTTTGGCCTGATGCCG GACCAGGGCCTGAAGAAGACCGGCATACAAAGCCAGGACGGAGCTGGGGAATGCATGCTC TTCAAGGACGGTCTCTACGCTGCAGCCGCCGCCGCTGCAGCAGCCACAGCAGCATCTAGC ATGGGTGTCACTCCATTCTAA

Peptide Sequence

PEP ID	Os04t0536300-01
PEP Infomation	pep chromosome:IRGSP-1.0:4:26797695:26800253:-1 gene:Os04g0536300 transcript:Os04t0536300-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:YABBY 5 description:Transcription factor with zinc finger domain and helix-loop-helix domain (YABBY domain), Leaf development (Os04t0536300-01)
Sequence	MMSSAPETFSLDHLSQHQQQQPPPLAEQEQLCYVHCNFCDTILAVGVPCSSLFKTVTVRC GHCANLLSVNLRGLLLPAAASTANQLPFGQALLSPTSPHGLLDEVPSFQAPASLMTEQAS PNVSSITSSNSSCANNAPATSMASAANKATQREPQQPKNAPSANRTSEKRQRVPSAYNRF IKDEIQRIKASNPDITHREAFSAAAKNWAHFPHIHFGLMPDQGLKKTGIQSQDGAGECML FKDGLYAAAAAAAAATAASSMGVTPF

Transcript Sequence

Transcript ID	Os04t0536300-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:26797695:26800253:-1 gene:Os04g0536300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:YABBY 5 description:Transcription factor with zinc finger domain and helix-loop-helix domain (YABBY domain), Leaf development (Os04t0536300-01)
Sequence	ATCCGCTAGCTTCATCTCCACTAGTCTCATCCCTCCTTCTCCCTCTCCTCGTTGAACACC GCACTATCAAATCACCCAGCTGAAAGCCAAGACCGCGCGCGCCGGCCGGCCGGGCAGGGA TCACCTAGCTAGGATACGCGCCATGATGTCGTCGGCGCCGGAGACGTTCTCGCTGGACCA CCTCTCGCAGCATCAGCAGCAGCAGCCGCCGCCGCTCGCCGAGCAGGAGCAGCTCTGCTA CGTGCACTGCAACTTCTGCGACACCATCCTCGCGGTGGGCGTGCCGTGTAGCAGCCTGTT CAAGACGGTCACCGTGCGGTGCGGCCACTGCGCCAACCTGCTCTCCGTCAACCTCCGCGG CCTCCTGCTCCCGGCCGCCGCCTCCACCGCCAACCAGCTCCCCTTCGGCCAGGCTCTCCT CTCCCCCACCTCACCGCACGGCCTCCTTGATGAGGTGCCGTCATTCCAAGCGCCGGCGAG CCTAATGACCGAACAGGCGAGTCCCAACGTGAGCAGCATCACGAGCAGCAACAGCAGCTG TGCTAACAACGCGCCGGCGACGTCGATGGCGTCGGCGGCCAACAAGGCTACCCAGCGAGA GCCGCAGCAGCCGAAGAACGCGCCGTCAGCCAACAGGACTTCAGAGAAGCGGCAGAGGGT TCCCTCGGCATACAACCGATTCATCAAAGATGAGATACAACGCATCAAGGCAAGCAATCC GGACATCACCCACAGGGAGGCTTTCAGCGCTGCTGCCAAGAACTGGGCCCATTTCCCACA CATCCATTTTGGCCTGATGCCGGACCAGGGCCTGAAGAAGACCGGCATACAAAGCCAGGA CGGAGCTGGGGAATGCATGCTCTTCAAGGACGGTCTCTACGCTGCAGCCGCCGCCGCTGC AGCAGCCACAGCAGCATCTAGCATGGGTGTCACTCCATTCTAACGCCTCAGATCAATGCA CGATCTGGCTTAAAAAAAACTTTGTGTCCCACCCTGTAGTTAGGGTCCTGCATGTCTCGA TCTCCAGATATGATCTCCGGTTGCTTGTTAACTGAAATGTTCCTCTATATATGGACGATC ATGGCACCATATGCATGGCATCTTGGCATGCATCGATCGTATCTAAGTCCTTATCTATGT GTAATTCTAGTTTTCTCAGTTTCTTCATGTATTTTCCCCTTAATTTTTCCTATTCCTATT CGCCTGTACAGAGGCTGCTAGCTGTGCGTGCTGCCTCTTATATATCTTATGGACATAACT AGATCGATTTGGTTTAATTACCAGGTGATCATTTGAAATC