Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0534400-01
CDS Infomation	cds chromosome:IRGSP-1.0:4:26712651:26715739:-1 gene:Os04g0534400 gene_biotype:protein_coding transcript_biotype:protein_coding description:PapD-like domain containing protein. (Os04t0534400-01)
Sequence	ATGGGCTCCGACTCCAAGGAGTTGCTCGGGATCGAGCCGCTCGAGCTCCGGTTCTCCTTC GAGACGAAGAAGCAGATCTCATGCTCCATGCAGCTGACGAACAGAACAGATGACTACATC GCCTTTAAGGTCAAGACAACTAGCCCAAAGAAGTACTGCGTCAGGCCGAACAGTGGCATT GTGCCGCCACGGTCCACCAGCGATGTCATCGTAACAATGCAAGCCCAACGGGAGGCACCA GCAGACATGCAGTGCAAAGACAAGTTTCTAGTGCAGAGCGTTGTGGTGACTGAAGGCACA ACAACCAAGGATGTCACTGGAGAGATGTTTAACAAAGGATCAGGTAATGTGGTGGATGAG AGGAAGTTGAAGGTTGTCTATGTCCAACCACCACGACCACCATCCCCCGTGCGTGAGGGA TCTGAAGAAGGCTCGTCTCCTCGGGCTTCATTATCAGAAGGGGGCAACTTGAATTATCAA GATACAACTCGGGAATCTGATGAGCCACCATTGCTATCTGCTACAAGAGCACACAAGGAT GCAGAAGATGTAACATCTGATTCTGAGACATCTGCTTTGATTTCAAGATTGACAGAAGAA AGAAACTCTGCTATTCAGCAGAACAATAAGCTTCTCGAGGAGATGGACCTTGTGAGGAGG GAAATTAGCAAGCAGAATGGTGGTTTCCCTTTTGTGTTCGTGGTGGTCGTTGCTCTTCTG GGAATTCTACTGGGGTATATCATGAAGAGATAG

Peptide Sequence

PEP ID	Os04t0534400-01
PEP Infomation	pep chromosome:IRGSP-1.0:4:26712651:26715739:-1 gene:Os04g0534400 transcript:Os04t0534400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:PapD-like domain containing protein. (Os04t0534400-01)
Sequence	MGSDSKELLGIEPLELRFSFETKKQISCSMQLTNRTDDYIAFKVKTTSPKKYCVRPNSGI VPPRSTSDVIVTMQAQREAPADMQCKDKFLVQSVVVTEGTTTKDVTGEMFNKGSGNVVDE RKLKVVYVQPPRPPSPVREGSEEGSSPRASLSEGGNLNYQDTTRESDEPPLLSATRAHKD AEDVTSDSETSALISRLTEERNSAIQQNNKLLEEMDLVRREISKQNGGFPFVFVVVVALL GILLGYIMKR

Transcript Sequence

Transcript ID	Os04t0534400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:26712651:26715739:-1 gene:Os04g0534400 gene_biotype:protein_coding transcript_biotype:protein_coding description:PapD-like domain containing protein. (Os04t0534400-01)
Sequence	CACACCAACCCGACATTCCCTCGTGCTCTTCCCATCCGCGACTCCAAAATTCCCGTCCGC TCCTCCAGGCAAGCAAGCACGGAAACCCACTCATCACTCACTCACTCCCCCAAACCCAAA CCCTAGCTACTACTAGCTCCCCGCTCCGGATCAAGCGCATCTCGAGTTCGAGCGAGCATT CCCCTCTTCGGTTCGAGTGGGTTGGCTGGCGGCAGATGGGCTCCGACTCCAAGGAGTTGC TCGGGATCGAGCCGCTCGAGCTCCGGTTCTCCTTCGAGACGAAGAAGCAGATCTCATGCT CCATGCAGCTGACGAACAGAACAGATGACTACATCGCCTTTAAGGTCAAGACAACTAGCC CAAAGAAGTACTGCGTCAGGCCGAACAGTGGCATTGTGCCGCCACGGTCCACCAGCGATG TCATCGTAACAATGCAAGCCCAACGGGAGGCACCAGCAGACATGCAGTGCAAAGACAAGT TTCTAGTGCAGAGCGTTGTGGTGACTGAAGGCACAACAACCAAGGATGTCACTGGAGAGA TGTTTAACAAAGGATCAGGTAATGTGGTGGATGAGAGGAAGTTGAAGGTTGTCTATGTCC AACCACCACGACCACCATCCCCCGTGCGTGAGGGATCTGAAGAAGGCTCGTCTCCTCGGG CTTCATTATCAGAAGGGGGCAACTTGAATTATCAAGATACAACTCGGGAATCTGATGAGC CACCATTGCTATCTGCTACAAGAGCACACAAGGATGCAGAAGATGTAACATCTGATTCTG AGACATCTGCTTTGATTTCAAGATTGACAGAAGAAAGAAACTCTGCTATTCAGCAGAACA ATAAGCTTCTCGAGGAGATGGACCTTGTGAGGAGGGAAATTAGCAAGCAGAATGGTGGTT TCCCTTTTGTGTTCGTGGTGGTCGTTGCTCTTCTGGGAATTCTACTGGGGTATATCATGA AGAGATAGATGAGCTTGTCTAGTTCTGTTTCGTTAGGCCTTTTCTTTCTTAAGAATTGAT TTGTTGTCTGCATTTTCTGATGCGTTTGCTCACATGTTCTACACTACCGCAGTCCGCATA GCAAATTCATCCTAGGATCTGGTATATTCTGTAATTGCGTGCTTCAGATTGGCTGGCTAC CATACACAGTCAATAACTCATCTCCTTAACACTAAGTTGCAAGTTAGTCGCGAGCTTGGA GAGCTTATGCAGTTAAGAAGTTTGCGCATCGGTATCTGTTGGTACAACTGTAAACTTGCT TTCAATTTACTAGTGTCCTGATTGCCTGATTCTG