Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0534000-01
CDS Infomation	cds chromosome:IRGSP-1.0:4:26689858:26692543:1 gene:Os04g0534000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF821, CAP10-like family protein. (Os04t0534000-01)
Sequence	ATGGAGGCAGCGGCGAAGGTTGGTCGGCTCACACGGAGCAGCCTGCAGGCGGCTTCCTGC CCGGCTGTGAACGGCGGCGTGGTCGTCTTCTTCGCCGCGGTTGTCGCCGGAGCTCTCGTC TCCGCTTCCTGGATGTCTACGGGCGCCAGGGTCACTTCGATCCCTATGATCGCCACCCGG AACATGGCACAGCATGCGGCAGCGAGTCCGGAACCAGAGCCGACTCTGCCACGCCTCGGC AATCTCGCGCCCCCACCACGGCAACCGCCACCGCCAGCACCTGCCCCGGCGCCGGACGCC GCCGCGGCAGCGTCGCCGTCGTCCTCCTGCCCGGCATACTTCCGGTGGATCCACGAGGAC CTGAGGCCGTGGCGGGACGCGGGGATCACGCGCGAGGCGGTGGACGGCGCCGCCCGCCGG TACGGCGCCAAGTTCCGCGTCACCGTGGTCGCGGGGCGCCTCCACGTCGCGCGCTACGGG CGGTGCTTCCAGACGCGGGACATGTTCACGCAGTGGGGCGTCCTGCAGCTGCTCCGCCGC TACCAGGGCCGCGTCCCCGACCTCGACCTCATGTTCGACTGCCAGGACCTGCCGGTCGTC AACGCCGGCGACCGCCGCGGCCGGACATCTTCTTCGCCGCCGCCGCTGTTCGGCTACTGC GGCAGCGAGCCCACGCTGGACATCGCCTTCCCTGACTGGTCGTTCTGGGGTTGGCCGGAG CTTAACATAAAGCCATGGGAGACGCTGCGAGGCGAGATAGCCGACGGGAACGCCGCGGTG AACTGGACGGGCAGGGCGCCGTACGCGTACTGGAAAGGGAACCCGACGGTGGGAGCCGAT CGCCGGAATCTCCTCAGGTGCAACGCGTCCGGGAAACGTGACTGGAACGCGAGGATATAC GAGCAGGATTGGAGGAAGGAGGTGCGAGACGGGTTCAGGGAATCAGACCTGGCAAAACAG TGCACTCACAGGTACAAGATTTATATCGAAGGAAGGGGCTGGTCAGTGAGCGAGAAGTAC ATCCTGGCCTGCGACGCGGTGGCGCTGATCGTGCGGCCGAGGTACCACGACTTCTTCTCG AGGGGGCTGATGCCGTTGCAGCACTACTGGCCCATCCCCGGCGGCGGCCGCGGCATGTGC CGGTCGATCAAGTTCGCCGTCGACTGGGGCAACGCTCACGCCGACAAGGCACAGGAAATA GCCGGGAACGCGACCAGGTTCATCCAAGAGGATCTAACGATGGACCGTGTCTACGACTAC ATGTTTCACCTTCTGACAGAGTACGCTAAGCTGCTCAAGTACAAGCCCACGGTGCCTGAC AGAGCCGTCGAGGTCACCGTGGAGTCCATGACGCGCGGCCGGCGGGGACTGGAGAGGCAG TTCATGGTGGACACCATGGTGGAAGCTGGTTCGGGCACCGGAGAGCCCTGCGAGCTGCCG CCGCCTTTCAGCTCTGAAGAACTGGAGACGCTGAGGAGAAGACAGGCGGATGCGGTGAGA CAGGTCGAGACGTGGGAGAAGCGATGA

Peptide Sequence

PEP ID	Os04t0534000-01
PEP Infomation	pep chromosome:IRGSP-1.0:4:26689858:26692543:1 gene:Os04g0534000 transcript:Os04t0534000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF821, CAP10-like family protein. (Os04t0534000-01)
Sequence	MEAAAKVGRLTRSSLQAASCPAVNGGVVVFFAAVVAGALVSASWMSTGARVTSIPMIATR NMAQHAAASPEPEPTLPRLGNLAPPPRQPPPPAPAPAPDAAAAASPSSSCPAYFRWIHED LRPWRDAGITREAVDGAARRYGAKFRVTVVAGRLHVARYGRCFQTRDMFTQWGVLQLLRR YQGRVPDLDLMFDCQDLPVVNAGDRRGRTSSSPPPLFGYCGSEPTLDIAFPDWSFWGWPE LNIKPWETLRGEIADGNAAVNWTGRAPYAYWKGNPTVGADRRNLLRCNASGKRDWNARIY EQDWRKEVRDGFRESDLAKQCTHRYKIYIEGRGWSVSEKYILACDAVALIVRPRYHDFFS RGLMPLQHYWPIPGGGRGMCRSIKFAVDWGNAHADKAQEIAGNATRFIQEDLTMDRVYDY MFHLLTEYAKLLKYKPTVPDRAVEVTVESMTRGRRGLERQFMVDTMVEAGSGTGEPCELP PPFSSEELETLRRRQADAVRQVETWEKR

Transcript Sequence

Transcript ID	Os04t0534000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:26689858:26692543:1 gene:Os04g0534000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF821, CAP10-like family protein. (Os04t0534000-01)
Sequence	ATTCCCTTGCGTACACGCCCAAACAAGTCAGGAATAGTAAAGCCGGAGCAGAAAACGCGG GCAGGAAAAGGAGCTAGTATGTGATGACGAGTTCGTCTTCATCGCTTCCGGTGTCGGCTC ATCCGTCCGAGGATGGAACAAGGCGTGCCGTCTGATTTGTGATTGAGGGGTGTTTACATG GAGGCAGCGGCGAAGGTTGGTCGGCTCACACGGAGCAGCCTGCAGGCGGCTTCCTGCCCG GCTGTGAACGGCGGCGTGGTCGTCTTCTTCGCCGCGGTTGTCGCCGGAGCTCTCGTCTCC GCTTCCTGGATGTCTACGGGCGCCAGGGTCACTTCGATCCCTATGATCGCCACCCGGAAC ATGGCACAGCATGCGGCAGCGAGTCCGGAACCAGAGCCGACTCTGCCACGCCTCGGCAAT CTCGCGCCCCCACCACGGCAACCGCCACCGCCAGCACCTGCCCCGGCGCCGGACGCCGCC GCGGCAGCGTCGCCGTCGTCCTCCTGCCCGGCATACTTCCGGTGGATCCACGAGGACCTG AGGCCGTGGCGGGACGCGGGGATCACGCGCGAGGCGGTGGACGGCGCCGCCCGCCGGTAC GGCGCCAAGTTCCGCGTCACCGTGGTCGCGGGGCGCCTCCACGTCGCGCGCTACGGGCGG TGCTTCCAGACGCGGGACATGTTCACGCAGTGGGGCGTCCTGCAGCTGCTCCGCCGCTAC CAGGGCCGCGTCCCCGACCTCGACCTCATGTTCGACTGCCAGGACCTGCCGGTCGTCAAC GCCGGCGACCGCCGCGGCCGGACATCTTCTTCGCCGCCGCCGCTGTTCGGCTACTGCGGC AGCGAGCCCACGCTGGACATCGCCTTCCCTGACTGGTCGTTCTGGGGTTGGCCGGAGCTT AACATAAAGCCATGGGAGACGCTGCGAGGCGAGATAGCCGACGGGAACGCCGCGGTGAAC TGGACGGGCAGGGCGCCGTACGCGTACTGGAAAGGGAACCCGACGGTGGGAGCCGATCGC CGGAATCTCCTCAGGTGCAACGCGTCCGGGAAACGTGACTGGAACGCGAGGATATACGAG CAGGATTGGAGGAAGGAGGTGCGAGACGGGTTCAGGGAATCAGACCTGGCAAAACAGTGC ACTCACAGGTACAAGATTTATATCGAAGGAAGGGGCTGGTCAGTGAGCGAGAAGTACATC CTGGCCTGCGACGCGGTGGCGCTGATCGTGCGGCCGAGGTACCACGACTTCTTCTCGAGG GGGCTGATGCCGTTGCAGCACTACTGGCCCATCCCCGGCGGCGGCCGCGGCATGTGCCGG TCGATCAAGTTCGCCGTCGACTGGGGCAACGCTCACGCCGACAAGGCACAGGAAATAGCC GGGAACGCGACCAGGTTCATCCAAGAGGATCTAACGATGGACCGTGTCTACGACTACATG TTTCACCTTCTGACAGAGTACGCTAAGCTGCTCAAGTACAAGCCCACGGTGCCTGACAGA GCCGTCGAGGTCACCGTGGAGTCCATGACGCGCGGCCGGCGGGGACTGGAGAGGCAGTTC ATGGTGGACACCATGGTGGAAGCTGGTTCGGGCACCGGAGAGCCCTGCGAGCTGCCGCCG CCTTTCAGCTCTGAAGAACTGGAGACGCTGAGGAGAAGACAGGCGGATGCGGTGAGACAG GTCGAGACGTGGGAGAAGCGATGACAGGTTCACGTGACCAGTGACGAAATGTAATAAGGA TGGCAAACCTCTCTGGTGACATCAATACATCACAGATTAATAGCCTCATAGGTTGGGTTT TGTTCGAATAGCAAAATACAGAATTTTGAAAGTAAATACTAAAATTCGTCATTCATAGTC