Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0533000-02
CDS Infomation	cds chromosome:IRGSP-1.0:4:26644104:26650189:1 gene:Os04g0533000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RNA helicase 6 description:Similar to RNA helicase (Fragment). (Os04t0533000-01);Similar to RNA helicase (Fragment). (Os04t0533000-02)
Sequence	ATGGATCCGCGCGCGAGGTACCCTCCCGGCATCGGCAACGGCCGGGGCGGGAACCCTAAC TACTACGGCCGTGGCCCACCGCCATCGCAGCATCAGCAGCACCAGCACCAGCACCAGCAG CCGCCGCACCCGCACCACCACCAGTACGTGCAGCGGCAGCCGCAGCCGCAGCAAACGCCG CACAACAGCCAGCATCAGCAGTGGCTTCGGCGGAACCAGATCGCCGCCGAGGCCGCGGGC GCCAGCGAGCAGAAGGCGCCGCCTGTCGCGGACGGCATAGATTCGAGTTCACAAGACTGG AAGGCCCAACTGAAGCTCCCACCGCAAGATACACGCTACAGGACAGAGGATGTTACTGCT ACCAAGGGAAATGAATTTGAAGACTATTTTCTGAAGCGAGAACTCCTTATGGGGATATAT GAGAAAGGATTTGAAAGACCTTCTCCTATACAAGAAGAAAGTATTCCTATTGCATTAACT GGCAGTGATATTCTTGCAAGAGCAAAAAATGGAACTGGCAAGACTGCTGCATTTTGTATA CCCGCGCTGGAAAAGATTGATCAAGACAAAAATGCTATTCAAGTTGTTATATTGGTTCCC ACAAGGGAATTGGCTCTACAAACATCACAAGTTTGCAAGGAGCTTGGGAAACATTTGAAG ATTCAAGTGATGGTCACTACTGGAGGAACCAGCCTAAAGGATGATATTGTCCGTCTTTAT CAACCTGTTCATTTACTTGTTGGAACTCCTGGTCGCATTTTAGACCTTACAAAGAAAGGT GTCTGCGTCCTGAAGAACTGTTCAATGCTTGTTATGGATGAGGCAGACAAGCTTCTTTCT CCTGAGTTCCAACCGTCTATTCAGGAATTGATTCGGTATCTTCCATCGAATCGGCAAATT TTGATGTTCTCTGCAACATTCCCTGTGACTGTCAAGGAGTTCAAGGACAAATATCTCCCT AAACCCTATGTCATTAACCTTATGGATGAACTTACATTGAAGGGAATTACACAGTTTTAT GCTTTTGTTGAAGAGAGGCAGAAAGTCCACTGTCTTAATACTCTTTTTTCCAAGCTGCAA ATTAATCAATCGATAATATTCTGTAACTCGGTAAATCGTGTTGAACTATTGGCAAAGAAG ATCACAGAGCTTGGTTATTCTTGCTTCTATATCCATGCTAAAATGTTGCAAGACCATCGG AACAGGGTTTTCCATGATTTTCGCAATGGTGCATGCAGGAACTTGGTTTGTACAGATCTT TTTACAAGGGGAATAGATATCCAAGCTGTTAATGTTGTTATCAATTTTGATTTCCCCAAG AGCGCAGAAACATATCTCCATAGGGTTGGTAGATCTGGCAGATTCGGCCACCTTGGTTTG GCTGTGAATTTGATCACCTATGAGGACCGTTTTAACTTGTATCGCATTGAACAAGAGCTT GGAACCGAGATAAAACCAATACCACCTCAGATAGACCGAGCAATATATTGCCAATAG

Peptide Sequence

PEP ID	Os04t0533000-02
PEP Infomation	pep chromosome:IRGSP-1.0:4:26644104:26650189:1 gene:Os04g0533000 transcript:Os04t0533000-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RNA helicase 6 description:Similar to RNA helicase (Fragment). (Os04t0533000-01);Similar to RNA helicase (Fragment). (Os04t0533000-02)
Sequence	MDPRARYPPGIGNGRGGNPNYYGRGPPPSQHQQHQHQHQQPPHPHHHQYVQRQPQPQQTP HNSQHQQWLRRNQIAAEAAGASEQKAPPVADGIDSSSQDWKAQLKLPPQDTRYRTEDVTA TKGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCI PALEKIDQDKNAIQVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIVRLY QPVHLLVGTPGRILDLTKKGVCVLKNCSMLVMDEADKLLSPEFQPSIQELIRYLPSNRQI LMFSATFPVTVKEFKDKYLPKPYVINLMDELTLKGITQFYAFVEERQKVHCLNTLFSKLQ INQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDL FTRGIDIQAVNVVINFDFPKSAETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQEL GTEIKPIPPQIDRAIYCQ

Transcript Sequence

Transcript ID	Os04t0533000-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:26644104:26650189:1 gene:Os04g0533000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RNA helicase 6 description:Similar to RNA helicase (Fragment). (Os04t0533000-01);Similar to RNA helicase (Fragment). (Os04t0533000-02)
Sequence	CCCACCCACGAACTCACGAGGAGGGAAATGCTCCCCTAAAAATCCCCCAATTGGAGCGAA GCACCGCCTTGATCCCTTCCTCCCAGCCAAGCCTGCGGCCGGATCTGAGCTCCGCCGCGC CGCGCGCCCTCGTAGCGATGGATCCGCGCGCGAGGTACCCTCCCGGCATCGGCAACGGCC GGGGCGGGAACCCTAACTACTACGGCCGTGGCCCACCGCCATCGCAGCATCAGCAGCACC AGCACCAGCACCAGCAGCCGCCGCACCCGCACCACCACCAGTACGTGCAGCGGCAGCCGC AGCCGCAGCAAACGCCGCACAACAGCCAGCATCAGCAGTGGCTTCGGCGGAACCAGATCG CCGCCGAGGCCGCGGGCGCCAGCGAGCAGAAGGCGCCGCCTGTCGCGGACGGCATAGATT CGAGTTCACAAGACTGGAAGGCCCAACTGAAGCTCCCACCGCAAGATACACGCTACAGGA CAGAGGATGTTACTGCTACCAAGGGAAATGAATTTGAAGACTATTTTCTGAAGCGAGAAC TCCTTATGGGGATATATGAGAAAGGATTTGAAAGACCTTCTCCTATACAAGAAGAAAGTA TTCCTATTGCATTAACTGGCAGTGATATTCTTGCAAGAGCAAAAAATGGAACTGGCAAGA CTGCTGCATTTTGTATACCCGCGCTGGAAAAGATTGATCAAGACAAAAATGCTATTCAAG TTGTTATATTGGTTCCCACAAGGGAATTGGCTCTACAAACATCACAAGTTTGCAAGGAGC TTGGGAAACATTTGAAGATTCAAGTGATGGTCACTACTGGAGGAACCAGCCTAAAGGATG ATATTGTCCGTCTTTATCAACCTGTTCATTTACTTGTTGGAACTCCTGGTCGCATTTTAG ACCTTACAAAGAAAGGTGTCTGCGTCCTGAAGAACTGTTCAATGCTTGTTATGGATGAGG CAGACAAGCTTCTTTCTCCTGAGTTCCAACCGTCTATTCAGGAATTGATTCGGTATCTTC CATCGAATCGGCAAATTTTGATGTTCTCTGCAACATTCCCTGTGACTGTCAAGGAGTTCA AGGACAAATATCTCCCTAAACCCTATGTCATTAACCTTATGGATGAACTTACATTGAAGG GAATTACACAGTTTTATGCTTTTGTTGAAGAGAGGCAGAAAGTCCACTGTCTTAATACTC TTTTTTCCAAGCTGCAAATTAATCAATCGATAATATTCTGTAACTCGGTAAATCGTGTTG AACTATTGGCAAAGAAGATCACAGAGCTTGGTTATTCTTGCTTCTATATCCATGCTAAAA TGTTGCAAGACCATCGGAACAGGGTTTTCCATGATTTTCGCAATGGTGCATGCAGGAACT TGGTTTGTACAGATCTTTTTACAAGGGGAATAGATATCCAAGCTGTTAATGTTGTTATCA ATTTTGATTTCCCCAAGAGCGCAGAAACATATCTCCATAGGGTTGGTAGATCTGGCAGAT TCGGCCACCTTGGTTTGGCTGTGAATTTGATCACCTATGAGGACCGTTTTAACTTGTATC GCATTGAACAAGAGCTTGGAACCGAGATAAAACCAATACCACCTCAGATAGACCGAGCAA TATATTGCCAATAGTTATCTGACAGAACGATCTTGTATGCCAATCTCTGGAAGTAATAAG ATAACCTGTGTAAATATCAGCTCATCAGGTGTCATTTCATGATCTCACATGGTGTATCTT AATCAAAGTTGTGTAGGGGCACTCAGTAGCAAGTGACTTTGTAACAAGCTCATCTAAATG CTGTGGCTTAGCCGTGAAGCTCTTGATCAGACAATATTGAATGTTGCTGATAAGGTCTGA CCCCAGGTTGTTTGCCCTAATCTCTTATGACCTGTTGTCATCCGACATTGTATCAGCTAG CTTGTTTTACAGGACTTTTTAACCCTGGTACCTTCTTCTGTCTGTGTTGTGGCCTCGCTG CACACGGATGGTTTATTCCACCTGAGCGATGCTGTCACCGTGTGTCGGTAGTGAATCAGC ATCATGGTCTCAATGTTTCATGGATACTTTCAGCATTTCACTTTCCAGTATTTTGTACTA TTTTCATGCGTTTTGATTGAATGATCATTTTGTAATGTATTGTTTGACTGGGTTGGTGTA CTAGGAGTATTTGTGGATCGGAGATGTTATGTTCTCTTCT