Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0531400-01
CDS Infomation	cds chromosome:IRGSP-1.0:4:26572754:26575020:-1 gene:Os04g0531400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Salt Intolerance 2 description:Similar to Lectin-like receptor kinase 7;2. (Os04t0531400-01)
Sequence	ATGGTGCTTCCCAAACCAGAAATGCCGTTCTTTGTCCTGCTCCTCTTCCTCGGCCTCGGC TGCCTCCGCCCGGCGGCGGCGACCGACGAGCGGTTCGTCTTCAACGGGTTCACCGGCGCC AACCTCAGCTTCGACGGCATGGCAACGGTGACCTCGAACGGGCTGCTCATGCTGACCAAC GGCACGAACCAGCTCAAGGGCCACGCCTTCTTCCCGTCGCCGCTCCAGTTCCAGAGGGGG CCCAACAGCACGGCGATGCAGTCCTTCTCCACGGCCTTCGTCAACTCCGCCAACAACGGC AACGCGACCAACCACCTCTTCGCCGTGGAGTTCGACACCATCCTCAACTCGGAGTTCAAC GACATGAGCGGCAACCATGTCGGGATCGACGTCAACGGCCTCAACTCCGTCGACGCCGAC AACGCCGGGTACTACGACGACGGCACCGGCGACTTCAAGAACATGAGCCTGGTGAGCCGC AGGCCGATGCAGGTGTGGGTGGACTTCGACGGCCAGACCATGCAGGTCAATGTCACCATG GCGCCGCTGGAGGTGGCGCGGCCAAAGAAGCCCCTGCTGTCCAAAATCGTCAACATCTCC TCCGTCATTGATGACACCGCCTACGTCGGCTTCTCCTCGGCGACCGGCATCCTCTTCTGC CGCCACTACGTGCTCGGCTGGAGCTTCAAGATGAACGGCGCCGCGCCGGCGCTCAACATC TCATCCCTGCCCTCCCTGCCGGTCACGTTCCCCAAGCCGCGGTCCAAGACGCTTGAGATC GTGCTGCCGATAGCCTCGGCGGTGCTCGTCTTCGCGGTGGCCGCCGCCGTGTTCGTGTTC ATGCGGCGGCGGCGCATGTTCTCGGAGCTCAAGGAGGAGTGGGAGGTGACGTTCGGGCCT CACAGGTTCTCGTACAAGGACCTGTTCCACGCCACCGACGGGTTCAGCGACAAGCGGCTC CTCGGCATCGGCGGGTTCGGGCGCGTGTACCGTGGCGTGCTCCCGTCGTCCAAGGCGGAG GTCGCCGTGAAGAAGGTGGCGCACGGGTCGAGGCAGGGGATGAGGGAGTTCGTGGCGGAG GTGGTCAGCATCGGCCGGCTCCGGCACCGGAACCTCGTGCAGCTGCTCGGCTACTGCCGG CGCAAGGGCGAGCTCCTGCTGGTGTACGACTACATGCCCAACGGCAGCCTGGACAAGCAG CTGTACGACCAGGGCAAGATCACCCTGAGATGGGCGCAGAGGTTCCGCATCATCAGGGGC GTCGCGTCCGGGCTGCTCTACCTCCACGAGGACTGGGAGCAGGTGGTGGTGCACAGGGAC ATCAAGGCCAGCAACGTGCTGCTCGACGCCGACATGAACGGCCGGCTCGGCGACTTCGGC CTGGCGCGGCTGTACGACCACGGCACCGACCCGCACACGACGCACGTGGTGGGCACCATG GGCTACCTGGCGCCGGAGCTGGGGCACACCGGCAAGGCGTCCAAGGCGTCGGACGTGTTC GCGTTCGGGGCCTTCATGCTGGAGGTGGCGTGCGGGCGGAAGCCCGTGGCGCAGGACGCG CGCGACAACCGCGTCGTGCTCGTCGACTGGGTGCTCGACCGGTGGCGCGCCGGGGCGATC ACGGACACGGTGGACCCGCGCCTGCACGGCGACTTCGTCGAGAGCGAGGCGAGCCTCGTG CTGCGGCTGGGCCTGCTGTGCTCGCACCCGCTGCCCGGCGCACGGCCGGGGACGAGGCAG CTTGTGCAGTACCTGGAAGGCGACGTGCCGCTGCCGGAGCTGTCGCCGACGTACCAGAGC TTCAACATGCTGGCGCTCATGCAGGACCAGGGGTTCGACCCCTACGTCATGTCCTACCCG ATGACATCCACCAGCGCAGGCACCTTCTCTGACCTCTCTGGAGGTAGATGA

Peptide Sequence

PEP ID	Os04t0531400-01
PEP Infomation	pep chromosome:IRGSP-1.0:4:26572754:26575020:-1 gene:Os04g0531400 transcript:Os04t0531400-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Salt Intolerance 2 description:Similar to Lectin-like receptor kinase 7;2. (Os04t0531400-01)
Sequence	MVLPKPEMPFFVLLLFLGLGCLRPAAATDERFVFNGFTGANLSFDGMATVTSNGLLMLTN GTNQLKGHAFFPSPLQFQRGPNSTAMQSFSTAFVNSANNGNATNHLFAVEFDTILNSEFN DMSGNHVGIDVNGLNSVDADNAGYYDDGTGDFKNMSLVSRRPMQVWVDFDGQTMQVNVTM APLEVARPKKPLLSKIVNISSVIDDTAYVGFSSATGILFCRHYVLGWSFKMNGAAPALNI SSLPSLPVTFPKPRSKTLEIVLPIASAVLVFAVAAAVFVFMRRRRMFSELKEEWEVTFGP HRFSYKDLFHATDGFSDKRLLGIGGFGRVYRGVLPSSKAEVAVKKVAHGSRQGMREFVAE VVSIGRLRHRNLVQLLGYCRRKGELLLVYDYMPNGSLDKQLYDQGKITLRWAQRFRIIRG VASGLLYLHEDWEQVVVHRDIKASNVLLDADMNGRLGDFGLARLYDHGTDPHTTHVVGTM GYLAPELGHTGKASKASDVFAFGAFMLEVACGRKPVAQDARDNRVVLVDWVLDRWRAGAI TDTVDPRLHGDFVESEASLVLRLGLLCSHPLPGARPGTRQLVQYLEGDVPLPELSPTYQS FNMLALMQDQGFDPYVMSYPMTSTSAGTFSDLSGGR

Transcript Sequence

Transcript ID	Os04t0531400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:26572754:26575020:-1 gene:Os04g0531400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Salt Intolerance 2 description:Similar to Lectin-like receptor kinase 7;2. (Os04t0531400-01)
Sequence	AATAGAAGCAGCAAAGCTTGGGCATTTGGTGAGGCACTGATTGAAGCTCAGCACTAGGCG AAGTGCAGGGCATGGTGCTTCCCAAACCAGAAATGCCGTTCTTTGTCCTGCTCCTCTTCC TCGGCCTCGGCTGCCTCCGCCCGGCGGCGGCGACCGACGAGCGGTTCGTCTTCAACGGGT TCACCGGCGCCAACCTCAGCTTCGACGGCATGGCAACGGTGACCTCGAACGGGCTGCTCA TGCTGACCAACGGCACGAACCAGCTCAAGGGCCACGCCTTCTTCCCGTCGCCGCTCCAGT TCCAGAGGGGGCCCAACAGCACGGCGATGCAGTCCTTCTCCACGGCCTTCGTCAACTCCG CCAACAACGGCAACGCGACCAACCACCTCTTCGCCGTGGAGTTCGACACCATCCTCAACT CGGAGTTCAACGACATGAGCGGCAACCATGTCGGGATCGACGTCAACGGCCTCAACTCCG TCGACGCCGACAACGCCGGGTACTACGACGACGGCACCGGCGACTTCAAGAACATGAGCC TGGTGAGCCGCAGGCCGATGCAGGTGTGGGTGGACTTCGACGGCCAGACCATGCAGGTCA ATGTCACCATGGCGCCGCTGGAGGTGGCGCGGCCAAAGAAGCCCCTGCTGTCCAAAATCG TCAACATCTCCTCCGTCATTGATGACACCGCCTACGTCGGCTTCTCCTCGGCGACCGGCA TCCTCTTCTGCCGCCACTACGTGCTCGGCTGGAGCTTCAAGATGAACGGCGCCGCGCCGG CGCTCAACATCTCATCCCTGCCCTCCCTGCCGGTCACGTTCCCCAAGCCGCGGTCCAAGA CGCTTGAGATCGTGCTGCCGATAGCCTCGGCGGTGCTCGTCTTCGCGGTGGCCGCCGCCG TGTTCGTGTTCATGCGGCGGCGGCGCATGTTCTCGGAGCTCAAGGAGGAGTGGGAGGTGA CGTTCGGGCCTCACAGGTTCTCGTACAAGGACCTGTTCCACGCCACCGACGGGTTCAGCG ACAAGCGGCTCCTCGGCATCGGCGGGTTCGGGCGCGTGTACCGTGGCGTGCTCCCGTCGT CCAAGGCGGAGGTCGCCGTGAAGAAGGTGGCGCACGGGTCGAGGCAGGGGATGAGGGAGT TCGTGGCGGAGGTGGTCAGCATCGGCCGGCTCCGGCACCGGAACCTCGTGCAGCTGCTCG GCTACTGCCGGCGCAAGGGCGAGCTCCTGCTGGTGTACGACTACATGCCCAACGGCAGCC TGGACAAGCAGCTGTACGACCAGGGCAAGATCACCCTGAGATGGGCGCAGAGGTTCCGCA TCATCAGGGGCGTCGCGTCCGGGCTGCTCTACCTCCACGAGGACTGGGAGCAGGTGGTGG TGCACAGGGACATCAAGGCCAGCAACGTGCTGCTCGACGCCGACATGAACGGCCGGCTCG GCGACTTCGGCCTGGCGCGGCTGTACGACCACGGCACCGACCCGCACACGACGCACGTGG TGGGCACCATGGGCTACCTGGCGCCGGAGCTGGGGCACACCGGCAAGGCGTCCAAGGCGT CGGACGTGTTCGCGTTCGGGGCCTTCATGCTGGAGGTGGCGTGCGGGCGGAAGCCCGTGG CGCAGGACGCGCGCGACAACCGCGTCGTGCTCGTCGACTGGGTGCTCGACCGGTGGCGCG CCGGGGCGATCACGGACACGGTGGACCCGCGCCTGCACGGCGACTTCGTCGAGAGCGAGG CGAGCCTCGTGCTGCGGCTGGGCCTGCTGTGCTCGCACCCGCTGCCCGGCGCACGGCCGG GGACGAGGCAGCTTGTGCAGTACCTGGAAGGCGACGTGCCGCTGCCGGAGCTGTCGCCGA CGTACCAGAGCTTCAACATGCTGGCGCTCATGCAGGACCAGGGGTTCGACCCCTACGTCA TGTCCTACCCGATGACATCCACCAGCGCAGGCACCTTCTCTGACCTCTCTGGAGGTAGAT GATGACCCGTTCCCATCAGCCGGATGTAGTTAATCAGTACCTAACTAGTATCATCCTGTT TTGTTTAAGATCAGAACTTTGGTGTTGTTATGTTTATATCTATGATGTAAAGTGGTGTTA CGAGAATAGCTCAGTGTTCAGATAAGAGCTGAGAAATAACAGATCTGAAATTAAAC