Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os04t0530300-01
CDS Infomation

cds chromosome:IRGSP-1.0:4:26524261:26528367:-1 gene:Os04g0530300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to OSIGBa0155K17.11 protein. (Os04t0530300-01)
Sequence

ATGGCGAAGGATCAGAACGGCTCGGCCGCCGGCGAGGGGGAGGCGGCTGCGGCTGTGGCG
GCGCGCAGCCGCAGCAAGTCCATAGAAGCCGACGAGGAGGAGCGTTCGAAGGGGAGACGG
GACCGGGACCGGGACCGCCGTGGCAAGTCGAAGAGGCGGGAGGAGGAGGAGGAGGAGGAG
GAGGAGGAGGGGGACGCCGGGAGCGAGTCCTCCGGCGAGGACTCAGGCGAGCGGCGGAAG
CGGCGCAGGAAGGAAAAGGAGCGGCGGCATCGGCGGCGCCGGAGCCGTAGCGCGAGCTCG
GGCTCGTCGTCGGAGTCTGAGTCCGAATCCGAGTCTTCTTACTCGGATTGCAGTGCGGGG
TCAGAGAGCGAGACAGACTCAGAGGAGGAGAGGCGAAGGAGGCGGCGGCGGAGGAGGAGG
AAGGAGAGGGAGGAGGAGGAGAGGAGGCGGAGGAGGAAGGATAAGGAAAGAAGGAAGAGG
AAGGAGAAGGAGAGGGAGAGGGAGAGAAAGAAAAAGGAGAAGAAGAAGAGGAGGAAGGAG
GAAAAGAAGAACTTGGGCAAAAAGGCTGCAGTGACAAACTCGTGGGGGAAGTATGGCATT
ATCCGCGAAGTCGATATGTGGAACAAACGACCAGAGTTCACTGCATGGTTGTCTGAAGTC
AAGCAGGTTAATTTGGAGGCATTGTCAAATTGGGAAGAGAAGCAAATGTTTAAGGAATTT
ATGGAAGATCACAACACAGCTACTTTTCCGTCAAAAAAATATTATGACTTGGATGCATAT
CACCGTCGTGTGATGGAAAAAGAGAAAAAGAAGGGCCTAAAGAATGCCTTGGGAACAGAA
CGTACTGTATTTAATGATGAGGAACAGCGACGGCTGGAATTGCTCAGGGAACGTGAACGG
CAAAAGGAGGAAGAAGTGGCAGCTTTAAAACGCTCCATGCAAACTGGAATGGCTCAAGCA
ATGAAAGAGCAGGCCCGGCTACGGGAGGAAATGATGTACCAGTACAGATTGGGCAATTTT
GAGGCTGCAGCTGCAATCCAGAAAAGATTGGATCCTGATGCTCCTCTACAGTAG

Peptide Sequence

PEP ID

Os04t0530300-01
PEP Infomation

pep chromosome:IRGSP-1.0:4:26524261:26528367:-1 gene:Os04g0530300 transcript:Os04t0530300-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to OSIGBa0155K17.11 protein. (Os04t0530300-01)
Sequence

MAKDQNGSAAGEGEAAAAVAARSRSKSIEADEEERSKGRRDRDRDRRGKSKRREEEEEEE
EEEGDAGSESSGEDSGERRKRRRKEKERRHRRRRSRSASSGSSSESESESESSYSDCSAG
SESETDSEEERRRRRRRRRRKEREEEERRRRRKDKERRKRKEKERERERKKKEKKKRRKE
EKKNLGKKAAVTNSWGKYGIIREVDMWNKRPEFTAWLSEVKQVNLEALSNWEEKQMFKEF
MEDHNTATFPSKKYYDLDAYHRRVMEKEKKKGLKNALGTERTVFNDEEQRRLELLRERER
QKEEEVAALKRSMQTGMAQAMKEQARLREEMMYQYRLGNFEAAAAIQKRLDPDAPLQ

Transcript Sequence

Transcript ID

Os04t0530300-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:4:26524261:26528367:-1 gene:Os04g0530300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to OSIGBa0155K17.11 protein. (Os04t0530300-01)
Sequence

GCTCGCTCGCCGCTTCGCCTCTCCTGATCCCCCTCCCCTCCTCAAGAATCCTCGCGAAAC
CCTAGGCGCGCGGCAGGTAGGGCATGGCGAAGGATCAGAACGGCTCGGCCGCCGGCGAGG
GGGAGGCGGCTGCGGCTGTGGCGGCGCGCAGCCGCAGCAAGTCCATAGAAGCCGACGAGG
AGGAGCGTTCGAAGGGGAGACGGGACCGGGACCGGGACCGCCGTGGCAAGTCGAAGAGGC
GGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGGGGACGCCGGGAGCGAGTCCTCCGGCG
AGGACTCAGGCGAGCGGCGGAAGCGGCGCAGGAAGGAAAAGGAGCGGCGGCATCGGCGGC
GCCGGAGCCGTAGCGCGAGCTCGGGCTCGTCGTCGGAGTCTGAGTCCGAATCCGAGTCTT
CTTACTCGGATTGCAGTGCGGGGTCAGAGAGCGAGACAGACTCAGAGGAGGAGAGGCGAA
GGAGGCGGCGGCGGAGGAGGAGGAAGGAGAGGGAGGAGGAGGAGAGGAGGCGGAGGAGGA
AGGATAAGGAAAGAAGGAAGAGGAAGGAGAAGGAGAGGGAGAGGGAGAGAAAGAAAAAGG
AGAAGAAGAAGAGGAGGAAGGAGGAAAAGAAGAACTTGGGCAAAAAGGCTGCAGTGACAA
ACTCGTGGGGGAAGTATGGCATTATCCGCGAAGTCGATATGTGGAACAAACGACCAGAGT
TCACTGCATGGTTGTCTGAAGTCAAGCAGGTTAATTTGGAGGCATTGTCAAATTGGGAAG
AGAAGCAAATGTTTAAGGAATTTATGGAAGATCACAACACAGCTACTTTTCCGTCAAAAA
AATATTATGACTTGGATGCATATCACCGTCGTGTGATGGAAAAAGAGAAAAAGAAGGGCC
TAAAGAATGCCTTGGGAACAGAACGTACTGTATTTAATGATGAGGAACAGCGACGGCTGG
AATTGCTCAGGGAACGTGAACGGCAAAAGGAGGAAGAAGTGGCAGCTTTAAAACGCTCCA
TGCAAACTGGAATGGCTCAAGCAATGAAAGAGCAGGCCCGGCTACGGGAGGAAATGATGT
ACCAGTACAGATTGGGCAATTTTGAGGCTGCAGCTGCAATCCAGAAAAGATTGGATCCTG
ATGCTCCTCTACAGTAGGCAGCTTGTGGAGAGCGATATTTTCATTTAGTTGACCCTTTTA
TGAATACTGTAGAACCTTATGAGTACTGCAGTACTGGTTGGCAAAAATTTTAATTTTACC
GAGCTGGCTTGTAAAATGCCGTGAGCGGATCGATATGATTTTCAGAATCTAAGCAATCTT
AGCT