Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0529800-01
CDS Infomation	cds chromosome:IRGSP-1.0:4:26506073:26508797:-1 gene:Os04g0529800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Sugar/inositol transporter domain containing protein. (Os04t0529800-01);Similar to OSIGBa0155K17.6 protein. (Os04t0529800-02)
Sequence	ATGGCGGGCGCGGAGGCCGCCAATGGCAGGAACAAGTACGCGGTTCTTGATCCCAGCGAC GAGCCGGAGGGGCGGAGGAGGCCCTCGGCGTGGGAGCGGAGGAGCAAGGAGCGGTTCGTG CTCGCCTGCGCCATCTTCGCCTCGCTCAACGCCATCCTCCTCGGCTACGATGTTGGTGTA ATGAGTGGCGCAATAATCTACATTCAGAAAGATCTTCACATTACCGAATTTCAGGAAGAA ATCCTAGTTGGTTGCTTGAGTGTGGTTTCACTCTTGGGAAGTCTGTCAGGAGGAAGAACA TCTGATGCAATTGGCAGGAAATGGACAATGGCTCTTGGTGCAATTGTCTTCCAGGCTGGT GCAGCCATAATGACGTTCGCCCCTTCATTCACCGTGCTCATGATCGGGAGGCTCCTTGCT GGTGTGGGCATTGGCTTTGGTGCCATGGTATCTGCAGTCTATATCGCTGAGATATCCCCT GCAGCTGCCCGTGGGACTCTCACATCCCTCCCTGAGATCTGTATCAATTTAGGGATCCTC CTTGGTTATGTTTCCAACTATGCTTTCTCGGGCCTTTCAGAGCATATCAATTGGAGGATT ATGCTTGGTGTTGGTATCCTCCCATCTGTCTTCATTGGATTTGCACTTTTTGTGATCCCA GAATCACCCAGGTGGTTGATGATGGAAAAGAGAGTTCCAGAAGCCAGGGCAGTATTGCTG CAGATAAGTGAGTCTGAAGCTGAGGTTGAAGAAAGGATTGCTGAGATTGAGGAAGCTGCA AATCTTCTTAAATCGACGAAATCCGAGGACAAGGCAGTGTGGATGGAGCTGTTGAACCCT TCTCCTGCTGTTCGTCGGATGCTATATGCTGGCTGTGGTATCCAAATGTTCCAGCAGATC ACGGGTATTGATGCTACTGTCTATTACAGCCCAACTATTTTCAGAGATGCCGGGATCAAG TCTGATCAGGAGCTTCTTGCAGCCACAGTGGCTGTTGGTTTTACTAAGACAGTGTTCATA TTGGTTGCAATTTTCCTCATTGATAAAGTTGGACGCAAACCGCTTCTTTATGTTAGCACC ATTGGAATGACTATGTGCTTATTTGTCTTGGGGATTGCACTCACATTGCAAAAGCATGCC ATGGGACTTATTTCTCCAAGAATTGGGATTGACCTAGCAGTTTTTGCAGTTTGTGGAAAT GTGGCTTTCTTTTCAATTGGCATGGGTCCAATATGTTGGGTCTTGTCTTCAGAGATATTT CCTTTGAGATTACGAGCTCAAGCATCGGCACTAGGTCAAGTAGGTGGTAGAGTGAGCAGT GGTTTGGTTTCCATGTCATTTCTTTCCATGGCCCGTATTATATCAGTGGCAGGAATGTTC TTTGTCTTTGCGGTTATCTCGACTGTCTCTGTGGCCTTTGTGTATTTCTGCGTGCCAGAA ACGAAAGGGAAAACTCTGGAGCAGATTGAGATGATGTTTGAAGGTGGGAAAGAATGGAGA GGGAGTGAGATAGAGCTTGAGGATACACAACATTTAATACAGAGCAGCAAGAAGTCTGTG TCTCTAGGCTGA

Peptide Sequence

PEP ID	Os04t0529800-01
PEP Infomation	pep chromosome:IRGSP-1.0:4:26506073:26508797:-1 gene:Os04g0529800 transcript:Os04t0529800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Sugar/inositol transporter domain containing protein. (Os04t0529800-01);Similar to OSIGBa0155K17.6 protein. (Os04t0529800-02)
Sequence	MAGAEAANGRNKYAVLDPSDEPEGRRRPSAWERRSKERFVLACAIFASLNAILLGYDVGV MSGAIIYIQKDLHITEFQEEILVGCLSVVSLLGSLSGGRTSDAIGRKWTMALGAIVFQAG AAIMTFAPSFTVLMIGRLLAGVGIGFGAMVSAVYIAEISPAAARGTLTSLPEICINLGIL LGYVSNYAFSGLSEHINWRIMLGVGILPSVFIGFALFVIPESPRWLMMEKRVPEARAVLL QISESEAEVEERIAEIEEAANLLKSTKSEDKAVWMELLNPSPAVRRMLYAGCGIQMFQQI TGIDATVYYSPTIFRDAGIKSDQELLAATVAVGFTKTVFILVAIFLIDKVGRKPLLYVST IGMTMCLFVLGIALTLQKHAMGLISPRIGIDLAVFAVCGNVAFFSIGMGPICWVLSSEIF PLRLRAQASALGQVGGRVSSGLVSMSFLSMARIISVAGMFFVFAVISTVSVAFVYFCVPE TKGKTLEQIEMMFEGGKEWRGSEIELEDTQHLIQSSKKSVSLG

Transcript Sequence

Transcript ID	Os04t0529800-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:26506073:26508797:-1 gene:Os04g0529800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Sugar/inositol transporter domain containing protein. (Os04t0529800-01);Similar to OSIGBa0155K17.6 protein. (Os04t0529800-02)
Sequence	TCGACATCTCCCACCTTTCTCGCGCCCCCATTGGATTGGGGGCGTCCGCCATTGATGACC AGCTCCGAATCTAGTACGGCGAATCGCCCGCGGCAAGGAGCAGCGTCGCCGTCGCCCGTG GATCGCCGGGAGCCCGGAGGGAGGCGGCGATGGCGGGCGCGGAGGCCGCCAATGGCAGGA ACAAGTACGCGGTTCTTGATCCCAGCGACGAGCCGGAGGGGCGGAGGAGGCCCTCGGCGT GGGAGCGGAGGAGCAAGGAGCGGTTCGTGCTCGCCTGCGCCATCTTCGCCTCGCTCAACG CCATCCTCCTCGGCTACGATGTTGGTGTAATGAGTGGCGCAATAATCTACATTCAGAAAG ATCTTCACATTACCGAATTTCAGGAAGAAATCCTAGTTGGTTGCTTGAGTGTGGTTTCAC TCTTGGGAAGTCTGTCAGGAGGAAGAACATCTGATGCAATTGGCAGGAAATGGACAATGG CTCTTGGTGCAATTGTCTTCCAGGCTGGTGCAGCCATAATGACGTTCGCCCCTTCATTCA CCGTGCTCATGATCGGGAGGCTCCTTGCTGGTGTGGGCATTGGCTTTGGTGCCATGGTAT CTGCAGTCTATATCGCTGAGATATCCCCTGCAGCTGCCCGTGGGACTCTCACATCCCTCC CTGAGATCTGTATCAATTTAGGGATCCTCCTTGGTTATGTTTCCAACTATGCTTTCTCGG GCCTTTCAGAGCATATCAATTGGAGGATTATGCTTGGTGTTGGTATCCTCCCATCTGTCT TCATTGGATTTGCACTTTTTGTGATCCCAGAATCACCCAGGTGGTTGATGATGGAAAAGA GAGTTCCAGAAGCCAGGGCAGTATTGCTGCAGATAAGTGAGTCTGAAGCTGAGGTTGAAG AAAGGATTGCTGAGATTGAGGAAGCTGCAAATCTTCTTAAATCGACGAAATCCGAGGACA AGGCAGTGTGGATGGAGCTGTTGAACCCTTCTCCTGCTGTTCGTCGGATGCTATATGCTG GCTGTGGTATCCAAATGTTCCAGCAGATCACGGGTATTGATGCTACTGTCTATTACAGCC CAACTATTTTCAGAGATGCCGGGATCAAGTCTGATCAGGAGCTTCTTGCAGCCACAGTGG CTGTTGGTTTTACTAAGACAGTGTTCATATTGGTTGCAATTTTCCTCATTGATAAAGTTG GACGCAAACCGCTTCTTTATGTTAGCACCATTGGAATGACTATGTGCTTATTTGTCTTGG GGATTGCACTCACATTGCAAAAGCATGCCATGGGACTTATTTCTCCAAGAATTGGGATTG ACCTAGCAGTTTTTGCAGTTTGTGGAAATGTGGCTTTCTTTTCAATTGGCATGGGTCCAA TATGTTGGGTCTTGTCTTCAGAGATATTTCCTTTGAGATTACGAGCTCAAGCATCGGCAC TAGGTCAAGTAGGTGGTAGAGTGAGCAGTGGTTTGGTTTCCATGTCATTTCTTTCCATGG CCCGTATTATATCAGTGGCAGGAATGTTCTTTGTCTTTGCGGTTATCTCGACTGTCTCTG TGGCCTTTGTGTATTTCTGCGTGCCAGAAACGAAAGGGAAAACTCTGGAGCAGATTGAGA TGATGTTTGAAGGTGGGAAAGAATGGAGAGGGAGTGAGATAGAGCTTGAGGATACACAAC ATTTAATACAGAGCAGCAAGAAGTCTGTGTCTCTAGGCTGACACTATTAGAAACAATAAA TTCGAAATCATTCGATGTTCAATGATGAACCATACTTATCCTGCTTCCATCGCCTACGGG ATTCTGAAATTCAGGTCTGCAAAATGATCAGGCTGCCTTGGACTGCTACGGATTTTGAGG GCTTAACACGAGTATATTAGGTGTAGGCGCAAAACAGCATGTAAATGTCTGCTTTACACA ACTACATCCCAAAATGTTACCTGGGAGGACACAGATGATGTTGTATATGGCGGTATCTTC CACCTACCAAAAAATATAGTTGTTGAAGTTCCTTATTCCACAGTTTAATTTTAATAGAGG AAGAGGTGTGTGATTTCCAACTGAATGAATTCTGTGTGATTCTTGATCCAGCTTTTTGAT TTAGTCCTTCATGATATTGTAGTACTGTGGCTTTGTTGGTCTAGTATAAAACCTTCAAGA CCATGCCATGTCTATAGCTTTGCATTGACGTGCAGAGTTCTGTAAATACCAGATTTGGAT GATTCATTCTGTCAAATTAATTATTTACT