Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0529500-02
CDS Infomation	cds chromosome:IRGSP-1.0:4:26484115:26494089:1 gene:Os04g0529500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:- description:Similar to C-terminal domain phosphatase-like 1. (Os04t0529500-01);Similar to OSIGBa0155K17.3 protein. (Os04t0529500-02);Similar to cDNA clone:J023022A09, full insert sequence. (Os04t0529500-03)
Sequence	GGGAGCACCTCCATTGGGCATGTGGAGGTGTGGCCCAAGGGCGGGACGGACCTGGCGGTG GCGGCGTGGGCGCGGGAGATCCGGGTGGACCACCTGTCGCCGCCCAGCGAGCGGTGCCCG CCGCTCGCCGTGCTGCACGCCGTTGCCGCGGGCGGTCGCTGCCTCGTGATGGAGTCCAGG CCCACGGCCACCGCGGATGAGCCCCCGCCGCCGCTCGTCGCCATGCACGCCGCTTGCCTC AGGGACGGAAAGACTGCTGTTTTTCCTCTAGGAGCAGAAGAGATCCATTTAGTGGCAATG ACTTCCAAGAGAAACTTGCCGAATCTTGCTTGTTTTTGGGGCTATAAGGTGCCATCGGGC TTGTATAATTCTTGCTTGAGCATGTTGAATCTTCGTTGCCTTGGTATTGTGTTTGACCTT GATGAAACATTGCTTGTCGCCAATACCACACGGTCCTTTGAAGACAGAATTGATGCACTT CAGAGAAAGTTGAGTAACGAGATTGATCCTCAACATATTAGTGGTATGTCGGCAGAGATC AAGAGGTACCAAGAAGACAAGTCTATCCTAAAGCAGTATATAGAAAATGATCAGGTTATT GATGGTGGCAAGGTTTATAAAGTACAGACTGAGGTTATCCCACCTTTACCTGATAATCAT CAGCCTATGACACGTCCAATCATAAGATTACAAGAGAAAAATATTATCCTGACGCGTATA AATCCATTGATAAGAGATACCAGTGTTCTGGTACGGTTGAGGCCTGCATGGGAGGATCTT CGGAGCTACTTAATTGCAAGAGGTCGCAAACGTTTTGAGGTATATGTGTGCACAATGGCT GAGAGGGACTATGCTTTGGAAATGTGGAGGTTGCTCGATCCAGATTCAAGATTGATAAAC TCTGTTCAACTTACTGACAGACTTGTCTGTGTTAAATCTGGCTCTCGAAAGTCTCTGCTG AATGTATTCCATGATGGGTCTTGCCACCCAGAAATGGCCCTAGTGATTGATGATCGCTTG AAAGTTTGGGATGAGAAAGACCAGTGTAGGGTTCACGTTGTTCCTGCCTTTTCTCCATAT TACTCTCCCCAGGCAGAGGCAAACTTCTCTGTTCCAGTTCTCTGCTTTGCTAGAAATGTT GCATGCAATGTCAGGGGTGGTTTTTTCAAAGAATTTGATGAGGTCCTTCTGCCACGGATA AGCGAGATTCACTACGAGGACGAAATAAATGATTTTCCGTCCGCTCCTGATGTTGGCAAT TATTTGATTACCGAGGACGAGAATGCTGCCATTTTGAATGTAAACAAAGATCCTCTTGCT TTTGATGGTATGGCAGATGCAGAAGTTGAGAGGAGATTGAAGGAAGTGTCTTGCAGTGTT CAAGCTGTGAATCCAATACCAACTAATGCTGATGTGATGCCTGTGGCCCCTAACCAGCAA CTTATTACATCATCTGTTCCAGAAGCACCATCATTGGGCATGATTCCTTTGAATAATGAT CAAGGTCCTCAGCCTCCTTCAAGCTGGCCGGTTGCTCAATCTGCTCCTGTGGATCCATCG CAAAGTTCTCCAGCTAGAGAAGAGGGTGAGGTTCCTGAATCTGAGTTGGATCCGGACACA AGGAGAAGGCTTCTCATATTACAGCATGGTCAAGACACGAGAGATCCTGCACCACCCTGT CCTGCAGGATCACCCGTACAGACCTCAGTATTGCCAGTGCAATCTCATGGGAATTGGTCA CATGTAGAGGATGAGATGAATCCAAGAAGCCTAAATAGGACCTCAACAGGGTTCCATTTA GAATCTGATGATATAAATTATGATAAAAAGCAACCACATAATCCACCGTATTTTCCTGAT GAGGATAATCTTATAACTTCTGATAGATATAACCGTCGGATCCATAGATACCCCTCACAG CTGCCTCACAGTGAGGATCATCATATGCTGAATCGTTCATCTATAGCCTACAGATCTTTT CCTGGAGAGGACATGGGAAACCGATTTGGTCCTTCGAATCATAGAAGCAGTAAAATAGAA CCAGGACACCAGTTTGTACAAAACGCAGAGACCTCAGCTGGTGTGTTGGAGGAAATTGCA GTGGAATGTGGGTTTAAGGTGGAGTACCAATCAACTTTGTGTAGTACTGCAGAGTTGCAA TTCTCCATTGAGGTTAGGATTTTAGGAGAAAAGGTAGGTGAAGGAATTGGAAAAACAAGA AAAGCAGCAAAACGCCAAGCTGTTAATATGTCCTTAAGAAATCTGGCAGAAAAATTTCTA ACGTCTGATCCGGATAAGATGATGATTCTGAAGGAGAATGGTTTTAGTAGTAATTCAAAC TCATTCAGATATTCGGGAGGTAGTAGAGATGACACATCACCAGTTGCAAGCACTTCAAAC GAGTCTAGATACATGGGCGAGAGAGTTGATACTTTAAGAAAACCTGCTGGTTCTGTTGCT GCTCTCAAAGAGCTTTGTACGGTTGAGGGTTACAACTTAGTTTTCCAAGAGCAGCCATCA CGTCCTCGTGGTTCATCAGGTAAAGAAGCTTATGCTCAGGTCGAAATAGGTGGTCAAATC CTGGGAAAAGGAGTTGGAGCAACATGGGAACAAGCTAAGCTGCAGGCTGCTGATGAGGCT CTAGGAAATTTGAAATCCATGCTTGGTATCTTTGCACATAAATCATCTGGATTTCAAAGG TCATCGGTATCAAATTTTAATCGCTTCAAACCAGATTTCCAGCGGAGTCTACAAACCATA CCTTCTGGTTGGGACTCTAGGAACAATGGTCGTGTTCTTTGA

Peptide Sequence

PEP ID	Os04t0529500-02
PEP Infomation	pep chromosome:IRGSP-1.0:4:26484115:26494089:1 gene:Os04g0529500 transcript:Os04t0529500-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:- description:Similar to C-terminal domain phosphatase-like 1. (Os04t0529500-01);Similar to OSIGBa0155K17.3 protein. (Os04t0529500-02);Similar to cDNA clone:J023022A09, full insert sequence. (Os04t0529500-03)
Sequence	GSTSIGHVEVWPKGGTDLAVAAWAREIRVDHLSPPSERCPPLAVLHAVAAGGRCLVMESR PTATADEPPPPLVAMHAACLRDGKTAVFPLGAEEIHLVAMTSKRNLPNLACFWGYKVPSG LYNSCLSMLNLRCLGIVFDLDETLLVANTTRSFEDRIDALQRKLSNEIDPQHISGMSAEI KRYQEDKSILKQYIENDQVIDGGKVYKVQTEVIPPLPDNHQPMTRPIIRLQEKNIILTRI NPLIRDTSVLVRLRPAWEDLRSYLIARGRKRFEVYVCTMAERDYALEMWRLLDPDSRLIN SVQLTDRLVCVKSGSRKSLLNVFHDGSCHPEMALVIDDRLKVWDEKDQCRVHVVPAFSPY YSPQAEANFSVPVLCFARNVACNVRGGFFKEFDEVLLPRISEIHYEDEINDFPSAPDVGN YLITEDENAAILNVNKDPLAFDGMADAEVERRLKEVSCSVQAVNPIPTNADVMPVAPNQQ LITSSVPEAPSLGMIPLNNDQGPQPPSSWPVAQSAPVDPSQSSPAREEGEVPESELDPDT RRRLLILQHGQDTRDPAPPCPAGSPVQTSVLPVQSHGNWSHVEDEMNPRSLNRTSTGFHL ESDDINYDKKQPHNPPYFPDEDNLITSDRYNRRIHRYPSQLPHSEDHHMLNRSSIAYRSF PGEDMGNRFGPSNHRSSKIEPGHQFVQNAETSAGVLEEIAVECGFKVEYQSTLCSTAELQ FSIEVRILGEKVGEGIGKTRKAAKRQAVNMSLRNLAEKFLTSDPDKMMILKENGFSSNSN SFRYSGGSRDDTSPVASTSNESRYMGERVDTLRKPAGSVAALKELCTVEGYNLVFQEQPS RPRGSSGKEAYAQVEIGGQILGKGVGATWEQAKLQAADEALGNLKSMLGIFAHKSSGFQR SSVSNFNRFKPDFQRSLQTIPSGWDSRNNGRVL

Transcript Sequence

Transcript ID	Os04t0529500-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:26484115:26494089:1 gene:Os04g0529500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:- description:Similar to C-terminal domain phosphatase-like 1. (Os04t0529500-01);Similar to OSIGBa0155K17.3 protein. (Os04t0529500-02);Similar to cDNA clone:J023022A09, full insert sequence. (Os04t0529500-03)
Sequence	GGGAGCACCTCCATTGGGCATGTGGAGGTGTGGCCCAAGGGCGGGACGGACCTGGCGGTG GCGGCGTGGGCGCGGGAGATCCGGGTGGACCACCTGTCGCCGCCCAGCGAGCGGTGCCCG CCGCTCGCCGTGCTGCACGCCGTTGCCGCGGGCGGTCGCTGCCTCGTGATGGAGTCCAGG CCCACGGCCACCGCGGATGAGCCCCCGCCGCCGCTCGTCGCCATGCACGCCGCTTGCCTC AGGGACGGAAAGACTGCTGTTTTTCCTCTAGGAGCAGAAGAGATCCATTTAGTGGCAATG ACTTCCAAGAGAAACTTGCCGAATCTTGCTTGTTTTTGGGGCTATAAGGTGCCATCGGGC TTGTATAATTCTTGCTTGAGCATGTTGAATCTTCGTTGCCTTGGTATTGTGTTTGACCTT GATGAAACATTGCTTGTCGCCAATACCACACGGTCCTTTGAAGACAGAATTGATGCACTT CAGAGAAAGTTGAGTAACGAGATTGATCCTCAACATATTAGTGGTATGTCGGCAGAGATC AAGAGGTACCAAGAAGACAAGTCTATCCTAAAGCAGTATATAGAAAATGATCAGGTTATT GATGGTGGCAAGGTTTATAAAGTACAGACTGAGGTTATCCCACCTTTACCTGATAATCAT CAGCCTATGACACGTCCAATCATAAGATTACAAGAGAAAAATATTATCCTGACGCGTATA AATCCATTGATAAGAGATACCAGTGTTCTGGTACGGTTGAGGCCTGCATGGGAGGATCTT CGGAGCTACTTAATTGCAAGAGGTCGCAAACGTTTTGAGGTATATGTGTGCACAATGGCT GAGAGGGACTATGCTTTGGAAATGTGGAGGTTGCTCGATCCAGATTCAAGATTGATAAAC TCTGTTCAACTTACTGACAGACTTGTCTGTGTTAAATCTGGCTCTCGAAAGTCTCTGCTG AATGTATTCCATGATGGGTCTTGCCACCCAGAAATGGCCCTAGTGATTGATGATCGCTTG AAAGTTTGGGATGAGAAAGACCAGTGTAGGGTTCACGTTGTTCCTGCCTTTTCTCCATAT TACTCTCCCCAGGCAGAGGCAAACTTCTCTGTTCCAGTTCTCTGCTTTGCTAGAAATGTT GCATGCAATGTCAGGGGTGGTTTTTTCAAAGAATTTGATGAGGTCCTTCTGCCACGGATA AGCGAGATTCACTACGAGGACGAAATAAATGATTTTCCGTCCGCTCCTGATGTTGGCAAT TATTTGATTACCGAGGACGAGAATGCTGCCATTTTGAATGTAAACAAAGATCCTCTTGCT TTTGATGGTATGGCAGATGCAGAAGTTGAGAGGAGATTGAAGGAAGTGTCTTGCAGTGTT CAAGCTGTGAATCCAATACCAACTAATGCTGATGTGATGCCTGTGGCCCCTAACCAGCAA CTTATTACATCATCTGTTCCAGAAGCACCATCATTGGGCATGATTCCTTTGAATAATGAT CAAGGTCCTCAGCCTCCTTCAAGCTGGCCGGTTGCTCAATCTGCTCCTGTGGATCCATCG CAAAGTTCTCCAGCTAGAGAAGAGGGTGAGGTTCCTGAATCTGAGTTGGATCCGGACACA AGGAGAAGGCTTCTCATATTACAGCATGGTCAAGACACGAGAGATCCTGCACCACCCTGT CCTGCAGGATCACCCGTACAGACCTCAGTATTGCCAGTGCAATCTCATGGGAATTGGTCA CATGTAGAGGATGAGATGAATCCAAGAAGCCTAAATAGGACCTCAACAGGGTTCCATTTA GAATCTGATGATATAAATTATGATAAAAAGCAACCACATAATCCACCGTATTTTCCTGAT GAGGATAATCTTATAACTTCTGATAGATATAACCGTCGGATCCATAGATACCCCTCACAG CTGCCTCACAGTGAGGATCATCATATGCTGAATCGTTCATCTATAGCCTACAGATCTTTT CCTGGAGAGGACATGGGAAACCGATTTGGTCCTTCGAATCATAGAAGCAGTAAAATAGAA CCAGGACACCAGTTTGTACAAAACGCAGAGACCTCAGCTGGTGTGTTGGAGGAAATTGCA GTGGAATGTGGGTTTAAGGTGGAGTACCAATCAACTTTGTGTAGTACTGCAGAGTTGCAA TTCTCCATTGAGGTTAGGATTTTAGGAGAAAAGGTAGGTGAAGGAATTGGAAAAACAAGA AAAGCAGCAAAACGCCAAGCTGTTAATATGTCCTTAAGAAATCTGGCAGAAAAATTTCTA ACGTCTGATCCGGATAAGATGATGATTCTGAAGGAGAATGGTTTTAGTAGTAATTCAAAC TCATTCAGATATTCGGGAGGTAGTAGAGATGACACATCACCAGTTGCAAGCACTTCAAAC GAGTCTAGATACATGGGCGAGAGAGTTGATACTTTAAGAAAACCTGCTGGTTCTGTTGCT GCTCTCAAAGAGCTTTGTACGGTTGAGGGTTACAACTTAGTTTTCCAAGAGCAGCCATCA CGTCCTCGTGGTTCATCAGGTAAAGAAGCTTATGCTCAGGTCGAAATAGGTGGTCAAATC CTGGGAAAAGGAGTTGGAGCAACATGGGAACAAGCTAAGCTGCAGGCTGCTGATGAGGCT CTAGGAAATTTGAAATCCATGCTTGGTATCTTTGCACATAAATCATCTGGATTTCAAAGG TCATCGGTATCAAATTTTAATCGCTTCAAACCAGATTTCCAGCGGAGTCTACAAACCATA CCTTCTGGTTGGGACTCTAGGAACAATGGTCGTGTTCTTTGATGTTCGTCTTCTGGACAT CTGAACTTGATGGGATCAATAGCATGGAACCTGTTGGCCCAGAAGAACTTCAAGGACTGC AAGTATGGACGAGATGGTCATGGAAGGAGAAATCGCTGTGCACATGATGCCTGCATGTTT CGTTCTGTCGTTCTCGATTTGGTGATAGAATTGTGTTGCTGTCATTTCCAATCTAGTAAC TCGGTAACTCCCAACAGGTGCTCTGTTTGAAGATGTTGTAACCTGGCCTCCGAGTGAGCT CACGCCACACGGTGCTCGGCTGTGATTTGCCCTGACTCTGTTACCCGTGATACCCCAGTG GAGTGTGGATATTAGAAGCATGACAGTTGGTAAAATGGCTTCCTTGCGTGC