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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os04t0528800-02
CDS Infomation

cds chromosome:IRGSP-1.0:4:26431391:26432133:-1 gene:Os04g0528800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Ferredoxin-thioredoxin reductase, variable chain (FTR-V) (Ferredoxin- thioredoxin reductase subunit A) (FTR-A). (Os04t0528800-01);Similar to OSIGBa0115K01-H0319F09.23 protein. (Os04t0528800-02)
Sequence

ATGGCACCCGCCACCGCCACCGCCGTGGCGTCCCCCTCCACCTCCTCCCGGCTCCTACAC
CGCAGCCTCCTCTCGCCAACACCCACGGCCGCTCGCTGCCTCCGGCCGCCGCTGTGCCGC
GGGCGCCTCCGCACCGTTCGCCAGGTTGTCGCCAACGGCGACGTCTCCTCGCCGTCCTCG
GACGTGGCCGCCGAGGAGTCCGCGGCGGCCCCCAAGATCGGCAAGCGCGTGCGCGTCACG
GCGCCGGTACGCGTCCACCACGTCTCCAAGGCGCCGGACCTGGACATCTGTGGCATGGAG
GGTGTGGTCAAGCAGTACGTCGGCATCTGGAAGGGCAAACGCATCACGGCCAATCTCCCC
TTCAAGGTGGAGTTCGAGCTCAGGGTGGATGGGCAGGACAAACCGGTCCGGTTCTTCGCC
CACCTTCGAGAGGACGAATTCGAGCTCGTCGAAGACGAATAG

Peptide Sequence

PEP ID

Os04t0528800-02
PEP Infomation

pep chromosome:IRGSP-1.0:4:26431391:26432133:-1 gene:Os04g0528800 transcript:Os04t0528800-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Ferredoxin-thioredoxin reductase, variable chain (FTR-V) (Ferredoxin- thioredoxin reductase subunit A) (FTR-A). (Os04t0528800-01);Similar to OSIGBa0115K01-H0319F09.23 protein. (Os04t0528800-02)
Sequence

MAPATATAVASPSTSSRLLHRSLLSPTPTAARCLRPPLCRGRLRTVRQVVANGDVSSPSS
DVAAEESAAAPKIGKRVRVTAPVRVHHVSKAPDLDICGMEGVVKQYVGIWKGKRITANLP
FKVEFELRVDGQDKPVRFFAHLREDEFELVEDE

Transcript Sequence

Transcript ID

Os04t0528800-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:4:26431391:26432133:-1 gene:Os04g0528800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Ferredoxin-thioredoxin reductase, variable chain (FTR-V) (Ferredoxin- thioredoxin reductase subunit A) (FTR-A). (Os04t0528800-01);Similar to OSIGBa0115K01-H0319F09.23 protein. (Os04t0528800-02)
Sequence

GAAATTCCCCACACGGCCACCAACCGTGCCGATGGCACCCGCCACCGCCACCGCCGTGGC
GTCCCCCTCCACCTCCTCCCGGCTCCTACACCGCAGCCTCCTCTCGCCAACACCCACGGC
CGCTCGCTGCCTCCGGCCGCCGCTGTGCCGCGGGCGCCTCCGCACCGTTCGCCAGGTTGT
CGCCAACGGCGACGTCTCCTCGCCGTCCTCGGACGTGGCCGCCGAGGAGTCCGCGGCGGC
CCCCAAGATCGGCAAGCGCGTGCGCGTCACGGCGCCGGTACGCGTCCACCACGTCTCCAA
GGCGCCGGACCTGGACATCTGTGGCATGGAGGGTGTGGTCAAGCAGTACGTCGGCATCTG
GAAGGGCAAACGCATCACGGCCAATCTCCCCTTCAAGGTGGAGTTCGAGCTCAGGGTGGA
TGGGCAGGACAAACCGGTCCGGTTCTTCGCCCACCTTCGAGAGGACGAATTCGAGCTCGT
CGAAGACGAATAGCTGAATAGGTCTCTTTTACAGAATAATGTGCTCTCGTCGTCTGCAGT
CTGCAGATGCAGTATCTGTATATTAGAAGAGAAGATTGAAGAGGGTGCGAGGAGATCGCA
AGTAAGTTGTTGTTTGTTTACTTGTCGCGTGCTCTTCCTCACTCTTTTGTAGTTCTGTTA
AACACCAACATTTTGAGATTTGAGAAACTGAGAACGGTTCGGATTATGACAATTATGAAT
GAAAGTGGTTATACTGATGGTTC