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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os04t0528200-01
CDS Infomation

cds chromosome:IRGSP-1.0:4:26392328:26393064:1 gene:Os04g0528200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to OSIGBa0115K01-H0319F09.17 protein. (Os04t0528200-01)
Sequence

ATGTGTACCGCTGTAACATCACGAGGTGTGACAGCCATGACGAGATCATGCTTCCTGATA
GTGCTCCTGCTCGCCGTTGCCATGGGTGGTAGCAAGCTCTCGCTCGCCGCCGGCGAGAGC
GGCGGTGGCGGCATCCCGACCACCCTCGGCCGCGAGCTCAGGGAGCTCATCTCCAAGGCC
AGCGACTTCCTCGGCGCGGCGCCGCGCCGGGCCGGAGCGGACGGGTGGCACGCCGCCGCG
GCCACCGGCGACGGCGCCGACGCGATCAGGGCGTCCCTGAGGAGCACGGCGAGGGGGAGG
CCGGCGAGGAAGTCCGCCGCGAACTGCATCCCCGCCGACATGTGCCGGAAGAAGAAGGTG
CTGTGCGGCAAGAGGTGCTACAGGTCGAGCTCCAGTAGCAGCCTCAGCCACATCCCGTCC
ACCAAGTGCGTTGTCAAGTGCAAGAAATGCGTGCCCACCTGCTAG

Peptide Sequence

PEP ID

Os04t0528200-01
PEP Infomation

pep chromosome:IRGSP-1.0:4:26392328:26393064:1 gene:Os04g0528200 transcript:Os04t0528200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to OSIGBa0115K01-H0319F09.17 protein. (Os04t0528200-01)
Sequence

MCTAVTSRGVTAMTRSCFLIVLLLAVAMGGSKLSLAAGESGGGGIPTTLGRELRELISKA
SDFLGAAPRRAGADGWHAAAATGDGADAIRASLRSTARGRPARKSAANCIPADMCRKKKV
LCGKRCYRSSSSSSLSHIPSTKCVVKCKKCVPTC

Transcript Sequence

Transcript ID

Os04t0528200-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:4:26392328:26393064:1 gene:Os04g0528200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to OSIGBa0115K01-H0319F09.17 protein. (Os04t0528200-01)
Sequence

ATGTGTACCGCTGTAACATCACGAGGTGTGACAGCCATGACGAGATCATGCTTCCTGATA
GTGCTCCTGCTCGCCGTTGCCATGGGTGGTAGCAAGCTCTCGCTCGCCGCCGGCGAGAGC
GGCGGTGGCGGCATCCCGACCACCCTCGGCCGCGAGCTCAGGGAGCTCATCTCCAAGGCC
AGCGACTTCCTCGGCGCGGCGCCGCGCCGGGCCGGAGCGGACGGGTGGCACGCCGCCGCG
GCCACCGGCGACGGCGCCGACGCGATCAGGGCGTCCCTGAGGAGCACGGCGAGGGGGAGG
CCGGCGAGGAAGTCCGCCGCGAACTGCATCCCCGCCGACATGTGCCGGAAGAAGAAGGTG
CTGTGCGGCAAGAGGTGCTACAGGTCGAGCTCCAGTAGCAGCCTCAGCCACATCCCGTCC
ACCAAGTGCGTTGTCAAGTGCAAGAAATGCGTGCCCACCTGCTAGATTTTCCTCCCTTGT
ACCGAGATTCCATTCCGCGGGTTGCCCCGGGGCCTCACCTCACGATCGATACCCATTCCT
GTTCCTCGTCGTGATGTTAACTCTCCACAATTTACTTTCCTATATATATAGATTCAGTTG
AATAAGCAGGCAAGTCTCATGCACGAGGTAGATAGGCAGGAGTTATAGAATTTGCTAAGT
CGGATATAATTTTTCGCCCTCGTACTATGTTTCTTCCACGTGAATGATCGATGAACTGCA
CGAGCTACTACTATACC