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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os04t0526600-01
CDS Infomation

cds chromosome:IRGSP-1.0:4:26323989:26324804:-1 gene:Os04g0526600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:rice alpha-amylase/subtilisin inhibitor, alpha-amylase/subtilisin inhibitor, endosperm-specific gene 69 description:Similar to Alpha-amylase/subtilisin inhibitor (RASI). (Os04t0526600-01)
Sequence

ATGGTTAGCCTCCGCCTCCCCCTCATACTCCTCTCCCTCCTGGCCATCTCCTTCTCATGC
AGCGCCGCGCCGCCGCCGGTGTACGACACGGAGGGCCACGAGCTGAGCGCCGACGGGAGC
TACTACGTCCTCCCGGCTAGCCCCGGCCACGGAGGGGGCCTCACGATGGCGCCCCGCGTG
CTCCCCTGCCCGCTCCTCGTGGCGCAGGAGACGGACGAGCGCCGCAAGGGGTTCCCCGTG
CGCTTCACCCCGTGGGGCGGCGCCGCGGCGCCGGAGGACAGGACCATCCGCGTCTCGACC
GACGTCCGCATCCGCTTCAACGCCGCGACGATCTGCGTGCAGTCCACCGAGTGGCATGTC
GGCGACGAGCCGCTCACGGGGGCGCGGCGCGTGGTGACGGGGCCGTTGATCGGGCCGAGC
CCGAGCGGGCGGGAGAACGCGTTCCGCGTGGAGAAGTACGGCGGTGGGTACAAGCTGGTG
TCGTGCAGGGACTCGTGCCAGGACCTGGGCGTGTCAAGGGACGGCGCGCGGGCGTGGCTG
GGCGCGAGCCAGCCGCCTCACGTCGTGGTCTTCAAGAAGGCCAGGCCAAGCCCACCAGAG
TAA

Peptide Sequence

PEP ID

Os04t0526600-01
PEP Infomation

pep chromosome:IRGSP-1.0:4:26323989:26324804:-1 gene:Os04g0526600 transcript:Os04t0526600-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:rice alpha-amylase/subtilisin inhibitor, alpha-amylase/subtilisin inhibitor, endosperm-specific gene 69 description:Similar to Alpha-amylase/subtilisin inhibitor (RASI). (Os04t0526600-01)
Sequence

MVSLRLPLILLSLLAISFSCSAAPPPVYDTEGHELSADGSYYVLPASPGHGGGLTMAPRV
LPCPLLVAQETDERRKGFPVRFTPWGGAAAPEDRTIRVSTDVRIRFNAATICVQSTEWHV
GDEPLTGARRVVTGPLIGPSPSGRENAFRVEKYGGGYKLVSCRDSCQDLGVSRDGARAWL
GASQPPHVVVFKKARPSPPE

Transcript Sequence

Transcript ID

Os04t0526600-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:4:26323989:26324804:-1 gene:Os04g0526600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:rice alpha-amylase/subtilisin inhibitor, alpha-amylase/subtilisin inhibitor, endosperm-specific gene 69 description:Similar to Alpha-amylase/subtilisin inhibitor (RASI). (Os04t0526600-01)
Sequence

ACACTCCCCTCGTTTCGTCGTGCACGAGCCGGAGCAGGAGACGAAGGGTTTCAGCCATGG
TTAGCCTCCGCCTCCCCCTCATACTCCTCTCCCTCCTGGCCATCTCCTTCTCATGCAGCG
CCGCGCCGCCGCCGGTGTACGACACGGAGGGCCACGAGCTGAGCGCCGACGGGAGCTACT
ACGTCCTCCCGGCTAGCCCCGGCCACGGAGGGGGCCTCACGATGGCGCCCCGCGTGCTCC
CCTGCCCGCTCCTCGTGGCGCAGGAGACGGACGAGCGCCGCAAGGGGTTCCCCGTGCGCT
TCACCCCGTGGGGCGGCGCCGCGGCGCCGGAGGACAGGACCATCCGCGTCTCGACCGACG
TCCGCATCCGCTTCAACGCCGCGACGATCTGCGTGCAGTCCACCGAGTGGCATGTCGGCG
ACGAGCCGCTCACGGGGGCGCGGCGCGTGGTGACGGGGCCGTTGATCGGGCCGAGCCCGA
GCGGGCGGGAGAACGCGTTCCGCGTGGAGAAGTACGGCGGTGGGTACAAGCTGGTGTCGT
GCAGGGACTCGTGCCAGGACCTGGGCGTGTCAAGGGACGGCGCGCGGGCGTGGCTGGGCG
CGAGCCAGCCGCCTCACGTCGTGGTCTTCAAGAAGGCCAGGCCAAGCCCACCAGAGTAAA
CGAGGGGAGGGGAGGGGGGGGGGGTCACTCATGCGTTGCGTGGTGCGGTGGTGCCTCTGT
AGCGTGTATAGGTAGTAGGGTGCGTGCGTGCGTGCGCATGTGCTGGTTGAATAATGTGTG
AAGAGGCTAGCAGGTATTGCTCCGTGGTTCTGTTCT