Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os04t0526000-01
CDS Infomation

cds chromosome:IRGSP-1.0:4:26310603:26311543:1 gene:Os04g0526000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:TEOSINTE BRANCHED/CYCLOIDEA/PROLIFERATING CELL FACTOR 17 description:Similar to Auxin-induced basic helix-loop-helix transcription factor. (Os04t0526000-01)
Sequence

ATGGCCTCCCGCGACGCCGCCACCTTCCAGGTCTACCGGCCCATGGCAATGCCAACGCCG
GCGGCGCTGCCACCGTCGTCCCAGCAGATCACAATGCCGTTCACGGCGGCGCTCGTGGAC
GCCGTGCTCCCAGCTCCCCGAAAGGCGGCGGCGACGCAGGGCGGCAAGGACCGGCACAGC
AAGGTGAACGGGCGCGGCCGGCGCGTGCGCATGCCGATCGTCTGCGCGGCGCGCGTGTTC
CAGCTCACCCGCGAGCTGGGGCTCAAGTCCGACGGCCAGACCATCGAGTGGCTGCTCCGG
CAGGCCGAGCCGTCCATCCTCGCCGCCACCGGCTCCGGCACCACCCCGGCCGTCTTCTCC
TGCTCGTCCGCCCCCTCCACCGCCTCCTCCTCCTTCCTCCTCGGCAAGCGCCCGCGCCAG
GAGGACCACGAGGCGCCGACGTTCTGGGAGGCGCTGCAGCAACAGCCGCGGCCCGCCGTG
TCGTCGTGGGGTGCCCTCGTCTCGCCGTCGCAGGAGGCGCAGGCGTACGCGTCGTCGGTG
GCGCAGGTCCACCACCTCAACCTACTCTCCGCGCTCTCCGGCGCCGCCACGAGACGGCCA
GCACAGGAGGAGTCCCGGTGA

Peptide Sequence

PEP ID

Os04t0526000-01
PEP Infomation

pep chromosome:IRGSP-1.0:4:26310603:26311543:1 gene:Os04g0526000 transcript:Os04t0526000-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:TEOSINTE BRANCHED/CYCLOIDEA/PROLIFERATING CELL FACTOR 17 description:Similar to Auxin-induced basic helix-loop-helix transcription factor. (Os04t0526000-01)
Sequence

MASRDAATFQVYRPMAMPTPAALPPSSQQITMPFTAALVDAVLPAPRKAAATQGGKDRHS
KVNGRGRRVRMPIVCAARVFQLTRELGLKSDGQTIEWLLRQAEPSILAATGSGTTPAVFS
CSSAPSTASSSFLLGKRPRQEDHEAPTFWEALQQQPRPAVSSWGALVSPSQEAQAYASSV
AQVHHLNLLSALSGAATRRPAQEESR

Transcript Sequence

Transcript ID

Os04t0526000-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:4:26310603:26311543:1 gene:Os04g0526000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:TEOSINTE BRANCHED/CYCLOIDEA/PROLIFERATING CELL FACTOR 17 description:Similar to Auxin-induced basic helix-loop-helix transcription factor. (Os04t0526000-01)
Sequence

AGAGAACAAGACCCTAGCTACCTGTTCAGTGTTCAATTCGCACGGAAAGCCATGGCCTCC
CGCGACGCCGCCACCTTCCAGGTCTACCGGCCCATGGCAATGCCAACGCCGGCGGCGCTG
CCACCGTCGTCCCAGCAGATCACAATGCCGTTCACGGCGGCGCTCGTGGACGCCGTGCTC
CCAGCTCCCCGAAAGGCGGCGGCGACGCAGGGCGGCAAGGACCGGCACAGCAAGGTGAAC
GGGCGCGGCCGGCGCGTGCGCATGCCGATCGTCTGCGCGGCGCGCGTGTTCCAGCTCACC
CGCGAGCTGGGGCTCAAGTCCGACGGCCAGACCATCGAGTGGCTGCTCCGGCAGGCCGAG
CCGTCCATCCTCGCCGCCACCGGCTCCGGCACCACCCCGGCCGTCTTCTCCTGCTCGTCC
GCCCCCTCCACCGCCTCCTCCTCCTTCCTCCTCGGCAAGCGCCCGCGCCAGGAGGACCAC
GAGGCGCCGACGTTCTGGGAGGCGCTGCAGCAACAGCCGCGGCCCGCCGTGTCGTCGTGG
GGTGCCCTCGTCTCGCCGTCGCAGGAGGCGCAGGCGTACGCGTCGTCGGTGGCGCAGGTC
CACCACCTCAACCTACTCTCCGCGCTCTCCGGCGCCGCCACGAGACGGCCAGCACAGGAG
GAGTCCCGGTGATCGCGCGCCGCAGCTATGCAGCTCAATTTGCGACGTGATTGCATGCGC
GCGCGGGGTTGATTTGTACTTGGAGCTAGTCTTGCTTTGTCTTGTGTGTATGGCTTGCCG
TACTTAATTTCCCATTTCCGCTGGTGTTTCCATGGGTGAATTTTGTGTGAATTTGCTTGA
TTTTAGGCCGGAGAATACTAGTAAGTAGCTGGTGAAGAATCAAGAATGTGATCAGATAGA
TCATCAGAGGCAGCAATTGTAGATACCAAGTCTTTTGGATT