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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os04t0525800-00
CDS Infomation

cds chromosome:IRGSP-1.0:4:26296166:26296783:-1 gene:Os04g0525800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to OSIGBa0115K01-H0319F09.1 protein. (Os04t0525800-00)
Sequence

ATGCCGCGGCCGGCCTCCTCCGCGCCGCCGCAGTCGTACACCAGGTACCGGTACGAGACG
CGCCGCCGGGACCCCAACCCGCGCGCGGCGGCGCTCCTCGTCGTCGACGTGCAGGGCCAC
TTCGCGTCGATCGCGGCTCCGGCCATGCCGGCCCTCGCTGCCACCGTCGCGCTCTGCCGC
GCCGCGGGCGCCCCGGTCGTCTACACCCGCCACGTCGACCCCGTGCCCCGCAGCGGCCCG
CTCGACGAGTGGTGGCCCGGCGACCGGATCGCCGACGGCACGCCGGCCGCCGAGCTCCTC
CCGGGCTCGGGCCGCCGCGAGGGCGACCTCGTGGTGGAGAAGAGCACGTACAGCGGCTTC
GCCGGCACGGGGCTCGAGGAGGCGCTGCGGCGGATGGGCGTGGAGGAGGTGATCGTGACG
GGCGTGATGACCAACCTGTGCTGCGAGACCACGGCGCGGGACGCGTTCGTGAGGGGGTTC
CGGGTGTTCTTCTCGGCCGACGCCACCGCCACGGCGAGCCAGGACCTGCAGGAGGCGACG
CTAGCCAACATGGCCTACGGATTCGCCTACGTCGTCGACTGCCAGCGGCTCGAGGCGGCA
TTTGGGAAGGTCAAGTGA

Peptide Sequence

PEP ID

Os04t0525800-00
PEP Infomation

pep chromosome:IRGSP-1.0:4:26296166:26296783:-1 gene:Os04g0525800 transcript:Os04t0525800-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to OSIGBa0115K01-H0319F09.1 protein. (Os04t0525800-00)
Sequence

MPRPASSAPPQSYTRYRYETRRRDPNPRAAALLVVDVQGHFASIAAPAMPALAATVALCR
AAGAPVVYTRHVDPVPRSGPLDEWWPGDRIADGTPAAELLPGSGRREGDLVVEKSTYSGF
AGTGLEEALRRMGVEEVIVTGVMTNLCCETTARDAFVRGFRVFFSADATATASQDLQEAT
LANMAYGFAYVVDCQRLEAAFGKVK

Transcript Sequence

Transcript ID

Os04t0525800-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:4:26296166:26296783:-1 gene:Os04g0525800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to OSIGBa0115K01-H0319F09.1 protein. (Os04t0525800-00)
Sequence

ATGCCGCGGCCGGCCTCCTCCGCGCCGCCGCAGTCGTACACCAGGTACCGGTACGAGACG
CGCCGCCGGGACCCCAACCCGCGCGCGGCGGCGCTCCTCGTCGTCGACGTGCAGGGCCAC
TTCGCGTCGATCGCGGCTCCGGCCATGCCGGCCCTCGCTGCCACCGTCGCGCTCTGCCGC
GCCGCGGGCGCCCCGGTCGTCTACACCCGCCACGTCGACCCCGTGCCCCGCAGCGGCCCG
CTCGACGAGTGGTGGCCCGGCGACCGGATCGCCGACGGCACGCCGGCCGCCGAGCTCCTC
CCGGGCTCGGGCCGCCGCGAGGGCGACCTCGTGGTGGAGAAGAGCACGTACAGCGGCTTC
GCCGGCACGGGGCTCGAGGAGGCGCTGCGGCGGATGGGCGTGGAGGAGGTGATCGTGACG
GGCGTGATGACCAACCTGTGCTGCGAGACCACGGCGCGGGACGCGTTCGTGAGGGGGTTC
CGGGTGTTCTTCTCGGCCGACGCCACCGCCACGGCGAGCCAGGACCTGCAGGAGGCGACG
CTAGCCAACATGGCCTACGGATTCGCCTACGTCGTCGACTGCCAGCGGCTCGAGGCGGCA
TTTGGGAAGGTCAAGTGA