Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os04t0525000-01
CDS Infomation

cds chromosome:IRGSP-1.0:4:26257984:26259784:-1 gene:Os04g0525000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF177 domain containing protein. (Os04t0525000-01)
Sequence

ATGGCGAGAGCCTGCAGCCCCGCGTTGAGGCTGCAGCTGCCGCCGAACCCGCCGATCACG
CCGCAGCTCCCGAGCTGCAGGACTCACTCCGCTGGCGCCAGGTGCAGAGGCTTCGCCGCC
GCCCACTCGCAGCCGCCTGCAGCCGGGCGCCCGGACGAGCCTGCCGCGGAGCCGTCACCG
AAGCAACCGGAGATCGCGCAGACGCAGAACCTCAGGAGGAGCCGCAGGAGGGGGCCGGGG
TCGCGGCAGAGCCTCGTGTCCGTCGGGACGTCGTGCGGCGGAGGGGATCAGTGGAGCAGC
GACTTCGACCTGACGCTGCGGCAGCTGCACCTAGACGACCTCATCGAAGACGGCCAGAAC
GACGACGCCGACGTCCTGGTGCACCTCCTAGTTCAGCAGCATACTCAGTTTGGAATGTCA
ATCAAAGGCCGAGTGGTCACGTCCTTCAGCAAAATATGCGATTCCTGCTCCTCGCCGTAC
TGCGCAAAGATTGATGAGCAGTTCAACCTCACGGTGCTGTCCTCAACCAGGAAAGAACAG
AGTGAGATGCCTGATATTGGAGACAGCGATCCATCTGTTATCTACGTGAGACCAGGTGTA
GAGGTTGATCTTGACTCCGTGATCCAAGAGACGATACGGCTAACGGCATCTGCCAAGAGT
TCATGCTCAGAGGCATGCGAAAAATCTACTGTCGTATGGCAATATGGTGGTAACCAGAAG
AAGCGTTACAGCCAACGGTGGTCGAAACTTCTGGACCTGAAGAAAACTCTGGATAAGGCG
GCTAACTGA

Peptide Sequence

PEP ID

Os04t0525000-01
PEP Infomation

pep chromosome:IRGSP-1.0:4:26257984:26259784:-1 gene:Os04g0525000 transcript:Os04t0525000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF177 domain containing protein. (Os04t0525000-01)
Sequence

MARACSPALRLQLPPNPPITPQLPSCRTHSAGARCRGFAAAHSQPPAAGRPDEPAAEPSP
KQPEIAQTQNLRRSRRRGPGSRQSLVSVGTSCGGGDQWSSDFDLTLRQLHLDDLIEDGQN
DDADVLVHLLVQQHTQFGMSIKGRVVTSFSKICDSCSSPYCAKIDEQFNLTVLSSTRKEQ
SEMPDIGDSDPSVIYVRPGVEVDLDSVIQETIRLTASAKSSCSEACEKSTVVWQYGGNQK
KRYSQRWSKLLDLKKTLDKAAN

Transcript Sequence

Transcript ID

Os04t0525000-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:4:26257984:26259784:-1 gene:Os04g0525000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF177 domain containing protein. (Os04t0525000-01)
Sequence

AGTTGCTGGAGCATCTCAGCTTCCAGGAGCGCGAGAGAAAATCGATCATGGCGAGAGCCT
GCAGCCCCGCGTTGAGGCTGCAGCTGCCGCCGAACCCGCCGATCACGCCGCAGCTCCCGA
GCTGCAGGACTCACTCCGCTGGCGCCAGGTGCAGAGGCTTCGCCGCCGCCCACTCGCAGC
CGCCTGCAGCCGGGCGCCCGGACGAGCCTGCCGCGGAGCCGTCACCGAAGCAACCGGAGA
TCGCGCAGACGCAGAACCTCAGGAGGAGCCGCAGGAGGGGGCCGGGGTCGCGGCAGAGCC
TCGTGTCCGTCGGGACGTCGTGCGGCGGAGGGGATCAGTGGAGCAGCGACTTCGACCTGA
CGCTGCGGCAGCTGCACCTAGACGACCTCATCGAAGACGGCCAGAACGACGACGCCGACG
TCCTGGTGCACCTCCTAGTTCAGCAGCATACTCAGTTTGGAATGTCAATCAAAGGCCGAG
TGGTCACGTCCTTCAGCAAAATATGCGATTCCTGCTCCTCGCCGTACTGCGCAAAGATTG
ATGAGCAGTTCAACCTCACGGTGCTGTCCTCAACCAGGAAAGAACAGAGTGAGATGCCTG
ATATTGGAGACAGCGATCCATCTGTTATCTACGTGAGACCAGGTGTAGAGGTTGATCTTG
ACTCCGTGATCCAAGAGACGATACGGCTAACGGCATCTGCCAAGAGTTCATGCTCAGAGG
CATGCGAAAAATCTACTGTCGTATGGCAATATGGTGGTAACCAGAAGAAGCGTTACAGCC
AACGGTGGTCGAAACTTCTGGACCTGAAGAAAACTCTGGATAAGGCGGCTAACTGAACCA
CGACGCACATTCATTCAACAGAATGAACACATGCTAGTACAAAATGAGTCAAATGACGCT
GGAACCCAAGACGCAGCGGATTGCTCTACCAAAATACAAGTGTTTCTGGCTATATATCTT
ATATCCGAACAAGGAACGGAGGGTGTAGCAGAGAAACAAGCTGCATCGCAACCCGCTAGC
TCTTCGATCTGATCATCTGAATCCTGTGTATAGAACTGTGCCATGTATACGTATAGATGA
CAATAAACATCACTGGACACGATTAGCCAGTTAGCACACTGTAAATTTTTTGGGGAAAAA
TGAATCAGAGTTTCTGCCATTT