Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0524900-00
CDS Infomation	cds chromosome:IRGSP-1.0:4:26253821:26256781:1 gene:Os04g0524900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:YELLOW STRIP-LIKE GENE 11 description:Similar to OSIGBa0153E02-OSIGBa0093I20.16 protein. (Os04t0524900-00)
Sequence	ATGGCGTCGGCCGCCGCCAACAACAGTAGCTCGGCCGCCTACGATGCGGCGGAGACAGGC GGCCTCCTCCGCCGCCGCAACACCACCGCCGCCGCCCGCGGCAATGCGGGGGAGGAGGAG GAGGAGGCGGAGGCGGTGGCGCCGTCCGTGGAGCAGGCGTTCGCGGACAAGCCCGTGCCG TCGTGGAGGGAGCAGCTGACGGTGCGCGCCTTCGTGGTCGGGTTCCTCCTCTCCATCATG TTCAACATCATCGTCATGAAGCTGTCCCTCACCACCGGCGTCATCCCCTCGCTCAACGTC TCCGCCAGCCTCCTCGGCTTCTTCCTCGTCCGCCTCTGGACGGCGGCCATCGAGAGGGTG GGCTTCCTCAAGCAGCCCTTCACCCGCCAGGAGAACACCGTCATCCAGACCTGCGTCGTC TCCGCCTACGGCGTCGCCTTCAGCGGTGGGTTTGGCAGTTACTTGTTTGGTATGAGCGAG ACCATAGCTAAGCAAGCAACAGAGGCTAATGATCCGATGAATATCAAGAATCCTCACCTT GGATGGATCATCGGGTTCATGTTCCTCGTCAGTTTTGTTGGGCTATTTGCACTGGTGCCC ATGCGAAAGGTGATGATTGTGGACTATAAACTGACCTACCCAAGTGGCACTGCAACTGCT TACCTTATTAACGGATTCCACACACCTGAGGGTGCTGATCTTGCAAAGAAACAAGTCCGG ACATTAGGCAAGTACTTTTCGATTAGCTTCCTCTGGGCTTTCTTCCAGTGGTTCTACACT GCTGGGGACAACTGCGGGTTTAGCTCCTTCCCGACATTTGGCCTTGAGGCTTTTAAGAAC AGGTTCTATTTTGATTTCTCACCTACCTATGTTGGTGTTGGAATGATCTGCCCCTATATC GTGAATGTGTCTCTTCTCATTGGTGGCATCATCTCATGGGGCATAATGTGGCCACTCATA AGCAAGAAGAAAGGAAGTTGGTACCCCGAGACACTTCCAGAAAGTAGTCTACTTGGACTG CAGGCTTACAAGGTGTTCATAACCATAGCAGTAATTCTTGGGGATGGCCTTTACAACTTT GTGAAGGTCTTCGGCTACACAATCAAAGGCTTCATAGTTATGTATAAGAACAAAAACTCA AACACGCTTCCTATCTCCGACAATGGCACTCCTGCCAACGCCACTGAAGAGGAGTCATTT GATGACAAGCGTCGCAATGAACTATTCCTGAAGGATCAAATTCCCAAGACAGTTGCGATT GGGGGCTATGTTGTTCTTGCAGTTATAACGAGTGGTTGCCTCCCTCTCATTATCCCACAG CTCAAGTGGTACTATATATTGATTGCATATATATTTGCACCTATAATGGCCTTCTGCAAT GCCTATGGAAGTGGCCTGACAGATTGGTCCCTCGCCACCACCTACGGTAAGCTTGCAATA TTTGTGTTTGGTGCGTGGGCAGGCGCTTCGCATGGTGGTGTGCTTGTAGGACTGGCTGCC TGTGGTGTCATGATGAACATTGTGGGAACAGCTTCTGATCTTATGCAAGACTTCAAGACT GGATATATGACTTTAGCCTCGCCAAGATCCATGTTTGTCAGCCAGGTGATAGGTACTGCC ATGGGGTGTGTTATTGCACCCTGCGTCTTCTGGCTGTTCTACAAATCCTTTAATATCGGT GCAAGTGATGGTGCTTACCCAGCACCTTACACCATTATGTACCGTAACATGGCGATTCTG GGTGTCAATGGATTATCCTCATTGCCAAAGTACTGCCTTACACTATGCTACATAGCCTTT GTTGCTGCCTTCATCATCAATCTGATAAAAGACCTGGTACCAGAGAGAGTGGCAAAGTAC ATCCCGATCCCCATGGCAGCAGCAATTCCTTTCTATCTTGGACCATACTTCGCCATTGAT ATGTTCATGGGCAGCGTAATTCTCTATTTCTGGGAATGGAGGAACAAAGATGAAGCGCAG TCGTTCGGTCCAGCAGTTGCGTCGGGCTTGATGTGCGGTGATGGGCTATGGGCCCTACCT CAGGCTGTTCTTTCTCTTGTCAACGTGAATCCTCCGCTTTGCATGAAGTTCTTATCAAGG GCTGCCAATGCCAAAGTGGATACATTCCTCGGTAACTAA

Peptide Sequence

PEP ID	Os04t0524900-00
PEP Infomation	pep chromosome:IRGSP-1.0:4:26253821:26256781:1 gene:Os04g0524900 transcript:Os04t0524900-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:YELLOW STRIP-LIKE GENE 11 description:Similar to OSIGBa0153E02-OSIGBa0093I20.16 protein. (Os04t0524900-00)
Sequence	MASAAANNSSSAAYDAAETGGLLRRRNTTAAARGNAGEEEEEAEAVAPSVEQAFADKPVP SWREQLTVRAFVVGFLLSIMFNIIVMKLSLTTGVIPSLNVSASLLGFFLVRLWTAAIERV GFLKQPFTRQENTVIQTCVVSAYGVAFSGGFGSYLFGMSETIAKQATEANDPMNIKNPHL GWIIGFMFLVSFVGLFALVPMRKVMIVDYKLTYPSGTATAYLINGFHTPEGADLAKKQVR TLGKYFSISFLWAFFQWFYTAGDNCGFSSFPTFGLEAFKNRFYFDFSPTYVGVGMICPYI VNVSLLIGGIISWGIMWPLISKKKGSWYPETLPESSLLGLQAYKVFITIAVILGDGLYNF VKVFGYTIKGFIVMYKNKNSNTLPISDNGTPANATEEESFDDKRRNELFLKDQIPKTVAI GGYVVLAVITSGCLPLIIPQLKWYYILIAYIFAPIMAFCNAYGSGLTDWSLATTYGKLAI FVFGAWAGASHGGVLVGLAACGVMMNIVGTASDLMQDFKTGYMTLASPRSMFVSQVIGTA MGCVIAPCVFWLFYKSFNIGASDGAYPAPYTIMYRNMAILGVNGLSSLPKYCLTLCYIAF VAAFIINLIKDLVPERVAKYIPIPMAAAIPFYLGPYFAIDMFMGSVILYFWEWRNKDEAQ SFGPAVASGLMCGDGLWALPQAVLSLVNVNPPLCMKFLSRAANAKVDTFLGN

Transcript Sequence

Transcript ID	Os04t0524900-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:26253821:26256781:1 gene:Os04g0524900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:YELLOW STRIP-LIKE GENE 11 description:Similar to OSIGBa0153E02-OSIGBa0093I20.16 protein. (Os04t0524900-00)
Sequence	ATGGCGTCGGCCGCCGCCAACAACAGTAGCTCGGCCGCCTACGATGCGGCGGAGACAGGC GGCCTCCTCCGCCGCCGCAACACCACCGCCGCCGCCCGCGGCAATGCGGGGGAGGAGGAG GAGGAGGCGGAGGCGGTGGCGCCGTCCGTGGAGCAGGCGTTCGCGGACAAGCCCGTGCCG TCGTGGAGGGAGCAGCTGACGGTGCGCGCCTTCGTGGTCGGGTTCCTCCTCTCCATCATG TTCAACATCATCGTCATGAAGCTGTCCCTCACCACCGGCGTCATCCCCTCGCTCAACGTC TCCGCCAGCCTCCTCGGCTTCTTCCTCGTCCGCCTCTGGACGGCGGCCATCGAGAGGGTG GGCTTCCTCAAGCAGCCCTTCACCCGCCAGGAGAACACCGTCATCCAGACCTGCGTCGTC TCCGCCTACGGCGTCGCCTTCAGCGGTGGGTTTGGCAGTTACTTGTTTGGTATGAGCGAG ACCATAGCTAAGCAAGCAACAGAGGCTAATGATCCGATGAATATCAAGAATCCTCACCTT GGATGGATCATCGGGTTCATGTTCCTCGTCAGTTTTGTTGGGCTATTTGCACTGGTGCCC ATGCGAAAGGTGATGATTGTGGACTATAAACTGACCTACCCAAGTGGCACTGCAACTGCT TACCTTATTAACGGATTCCACACACCTGAGGGTGCTGATCTTGCAAAGAAACAAGTCCGG ACATTAGGCAAGTACTTTTCGATTAGCTTCCTCTGGGCTTTCTTCCAGTGGTTCTACACT GCTGGGGACAACTGCGGGTTTAGCTCCTTCCCGACATTTGGCCTTGAGGCTTTTAAGAAC AGGTTCTATTTTGATTTCTCACCTACCTATGTTGGTGTTGGAATGATCTGCCCCTATATC GTGAATGTGTCTCTTCTCATTGGTGGCATCATCTCATGGGGCATAATGTGGCCACTCATA AGCAAGAAGAAAGGAAGTTGGTACCCCGAGACACTTCCAGAAAGTAGTCTACTTGGACTG CAGGCTTACAAGGTGTTCATAACCATAGCAGTAATTCTTGGGGATGGCCTTTACAACTTT GTGAAGGTCTTCGGCTACACAATCAAAGGCTTCATAGTTATGTATAAGAACAAAAACTCA AACACGCTTCCTATCTCCGACAATGGCACTCCTGCCAACGCCACTGAAGAGGAGTCATTT GATGACAAGCGTCGCAATGAACTATTCCTGAAGGATCAAATTCCCAAGACAGTTGCGATT GGGGGCTATGTTGTTCTTGCAGTTATAACGAGTGGTTGCCTCCCTCTCATTATCCCACAG CTCAAGTGGTACTATATATTGATTGCATATATATTTGCACCTATAATGGCCTTCTGCAAT GCCTATGGAAGTGGCCTGACAGATTGGTCCCTCGCCACCACCTACGGTAAGCTTGCAATA TTTGTGTTTGGTGCGTGGGCAGGCGCTTCGCATGGTGGTGTGCTTGTAGGACTGGCTGCC TGTGGTGTCATGATGAACATTGTGGGAACAGCTTCTGATCTTATGCAAGACTTCAAGACT GGATATATGACTTTAGCCTCGCCAAGATCCATGTTTGTCAGCCAGGTGATAGGTACTGCC ATGGGGTGTGTTATTGCACCCTGCGTCTTCTGGCTGTTCTACAAATCCTTTAATATCGGT GCAAGTGATGGTGCTTACCCAGCACCTTACACCATTATGTACCGTAACATGGCGATTCTG GGTGTCAATGGATTATCCTCATTGCCAAAGTACTGCCTTACACTATGCTACATAGCCTTT GTTGCTGCCTTCATCATCAATCTGATAAAAGACCTGGTACCAGAGAGAGTGGCAAAGTAC ATCCCGATCCCCATGGCAGCAGCAATTCCTTTCTATCTTGGACCATACTTCGCCATTGAT ATGTTCATGGGCAGCGTAATTCTCTATTTCTGGGAATGGAGGAACAAAGATGAAGCGCAG TCGTTCGGTCCAGCAGTTGCGTCGGGCTTGATGTGCGGTGATGGGCTATGGGCCCTACCT CAGGCTGTTCTTTCTCTTGTCAACGTGAATCCTCCGCTTTGCATGAAGTTCTTATCAAGG GCTGCCAATGCCAAAGTGGATACATTCCTCGGTAACTAA