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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os04t0524300-01
CDS Infomation

cds chromosome:IRGSP-1.0:4:26227217:26228435:1 gene:Os04g0524300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:A-TYPE RESPONSE REGULATOR 5 description:A-type response regulator, Cytokinin signaling (Os04t0524300-01)
Sequence

ATGGCCACCTGCAGGAGCCGTGGCGTCGAGAGGGGCGGCGCGCCGCACGTCCTCGCGGTG
GACGACAGCTCCGTGGACCGCGCCGTCATCTCCGGCATCCTCCGGAGCTCTCAGTTCCGC
GTGACGGCTGTGGACAGCGGGAAGAGGGCATTGGAGCTGCTAGGCTCGGAACCGAATGTG
AGCATGATTATCACTGACTACTGGATGCCGGAGATGACCGGGTATGAACTCCTGAAGAAG
GTCAAGGAGTCGTCCAGGCTGAAGGAGATCCCTGTGGTGATCATGTCCTCGGAGAACGTC
TCTACAAGGATCAACAGGTGCTTGGAGGAAGGAGCGGAGGATTTCTTGCTGAAGCCCGTG
CAGCCGTCGGACGTGTCGCGGCTGTGCAGCCGCGTCCTCCGGTGA

Peptide Sequence

PEP ID

Os04t0524300-01
PEP Infomation

pep chromosome:IRGSP-1.0:4:26227217:26228435:1 gene:Os04g0524300 transcript:Os04t0524300-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:A-TYPE RESPONSE REGULATOR 5 description:A-type response regulator, Cytokinin signaling (Os04t0524300-01)
Sequence

MATCRSRGVERGGAPHVLAVDDSSVDRAVISGILRSSQFRVTAVDSGKRALELLGSEPNV
SMIITDYWMPEMTGYELLKKVKESSRLKEIPVVIMSSENVSTRINRCLEEGAEDFLLKPV
QPSDVSRLCSRVLR

Transcript Sequence

Transcript ID

Os04t0524300-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:4:26227217:26228435:1 gene:Os04g0524300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:A-TYPE RESPONSE REGULATOR 5 description:A-type response regulator, Cytokinin signaling (Os04t0524300-01)
Sequence

ACGGTCACACACAGAATTCCTAAAGCCGCCTTGCCTTTTGCTCGCGAGTAGGACTGTAGG
AGAGATATCGATCTGATGGCCACCTGCAGGAGCCGTGGCGTCGAGAGGGGCGGCGCGCCG
CACGTCCTCGCGGTGGACGACAGCTCCGTGGACCGCGCCGTCATCTCCGGCATCCTCCGG
AGCTCTCAGTTCCGCGTGACGGCTGTGGACAGCGGGAAGAGGGCATTGGAGCTGCTAGGC
TCGGAACCGAATGTGAGCATGATTATCACTGACTACTGGATGCCGGAGATGACCGGGTAT
GAACTCCTGAAGAAGGTCAAGGAGTCGTCCAGGCTGAAGGAGATCCCTGTGGTGATCATG
TCCTCGGAGAACGTCTCTACAAGGATCAACAGGTGCTTGGAGGAAGGAGCGGAGGATTTC
TTGCTGAAGCCCGTGCAGCCGTCGGACGTGTCGCGGCTGTGCAGCCGCGTCCTCCGGTGA
GCCGTGCAGGCGGCGGCCGGTCGGGTGGGCGTCGTGGGCGACTGAAGCGTCCCTGCATGC
ATATGCGGCTTCAGTGTTTTGGGGGTTGGAATTAATAGCAGCAGAAGCAGAAGCAGTAGT
AGTAGTGATTAGTGGTAGCCAAACGCACTGTGCGCTTGCAGATGTTGTGGTTAATGGGCT
GAATTTGCCTCTCCCTTTCTCTATTTTTCTCATTCCGAATGTCATGTTCTAGCTGTTCCC
TGTGTCGATCTAGAATGCAGTTTGTTCCATCGGTTTGTCCATCCCAGTTGAAAAACCTGT
TGCAACAAATGTCTAATTTTATGTTCTTAACAGTTCATCCGTTTTTCTAGTTATATTCAT