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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os04t0522800-01
CDS Infomation

cds chromosome:IRGSP-1.0:4:26158845:26166779:1 gene:Os04g0522800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Photosystem II oxygen evolving complex protein PsbQ family protein. (Os04t0522800-01)
Sequence

ATGGATTGTGGGATTGAATTGAAGGGCTGCATTTGTCGGATCAACAACTGCGCTGTTGAA
CTCTTCTCAATGGAGGAGGACTTGGTGATTGATGATGAGGACTCGTGGGACCTTCTTGCG
AGGGATCTTCGGTTGAAGGCTACATTCTTGTACATTGACCTCGGCCGTGTGATTTGCTCC
TGTGAGATTGATGAACACAAGAAGATGCTCACCGGTTTAGCGAACAAGTTTTTCTACTTC
ATGGATGAGTTGACGAATGCAGTGAGCAGCAGAAGCATCCCCCTCATGCAGGTGTGCTAC
AGTGATACGACTCTTCTTCTCCGCGAGGTGCTCTCCGCCCTTGTGCCCTCCCAGTAA

Peptide Sequence

PEP ID

Os04t0522800-01
PEP Infomation

pep chromosome:IRGSP-1.0:4:26158845:26166779:1 gene:Os04g0522800 transcript:Os04t0522800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Photosystem II oxygen evolving complex protein PsbQ family protein. (Os04t0522800-01)
Sequence

MDCGIELKGCICRINNCAVELFSMEEDLVIDDEDSWDLLARDLRLKATFLYIDLGRVICS
CEIDEHKKMLTGLANKFFYFMDELTNAVSSRSIPLMQVCYSDTTLLLREVLSALVPSQ

Transcript Sequence

Transcript ID

Os04t0522800-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:4:26158845:26166779:1 gene:Os04g0522800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Photosystem II oxygen evolving complex protein PsbQ family protein. (Os04t0522800-01)
Sequence

AAGGTAGAGCCAAGCTGCGCTACTATTCCCCCTCTTCCTTTTTCTACGGAAGACGCAGTC
ACACGCTCAGGCAACGCAGGTAAAGAAAAAGAGAAGAAAAGGCAAGGTCTTGACCATTCC
AAGCACAACTTGGGATAAGACGAAGTAGTGCCAAATTATGGATTGTGGGATTGAATTGAA
GGGCTGCATTTGTCGGATCAACAACTGCGCTGTTGAACTCTTCTCAATGGAGGAGGACTT
GGTGATTGATGATGAGGACTCGTGGGACCTTCTTGCGAGGGATCTTCGGTTGAAGGCTAC
ATTCTTGTACATTGACCTCGGCCGTGTGATTTGCTCCTGTGAGATTGATGAACACAAGAA
GATGCTCACCGGTTTAGCGAACAAGTTTTTCTACTTCATGGATGAGTTGACGAATGCAGT
GAGCAGCAGAAGCATCCCCCTCATGCAGGTGTGCTACAGTGATACGACTCTTCTTCTCCG
CGAGGTGCTCTCCGCCCTTGTGCCCTCCCAGTAATTTGGGCCTAATTCAAGATTAGATGC
CCCCTGCAAGGCTAGTATTCGCTCTGCTTCTGCAGCATCGCAATGTATGGAGCAGGCGAG
GGTAAGATCTGAGAGCCTCACATTTTCTTGGAAGCAAGAAACACCCAGAAGAGGATGGAT
AAGGAAAATGTGAGAAGAATGAGGTGCAGAATCACCCTCACCTATGTACATATCTTTAAT
CAGCTTCAGAGTTGGAACTTGGAAGCACTTTAATGGATTAGCATCCGGTTTGCACCAATG
AGATGCACTTCTCTG