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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os04t0521800-02
CDS Infomation

cds chromosome:IRGSP-1.0:4:26114769:26117220:1 gene:Os04g0521800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ILL5 description:Peptidase M20 family protein. (Os04t0521800-01);Similar to OSIGBa0131L05.10 protein. (Os04t0521800-02)
Sequence

ATGGCCGCTCCTCTCTTCCTCCTCCTCCTCCTCCTCCTCGTCTCCTCCGCCTCCGCGGGT
TACGAGGAGGAGGCGCTGCTGCGGCGCGCGGAGGAGGAGCGGGACTGGATGGTGGGCGTG
CGGCGCCGCATCCACGCCCATCCGGAGCTCGCGTTCCGGGAGCACCACACCAGCGCCCTC
GTCCGCGACGAGCTGGAGCGGCTCGGCCTCACCGCCCGCGCGGTCGCCGGCACCGGCGTC
GTCGCCGACGTCGGCTCCGGCCTCCCCCCCGTCGTCGCCCTCCGCGCCGACATGGACGCC
CTCCCCGTCCAGGAATTAGTGGAGTGGGAACACAAGAGCAAAGTGGATGGTGTGATGCAT
GCCTGCGGTCATGATGTGCACACCGCGATGCTCCTGGGAGCTGCAAAGTTGCTTAGTGAG
CGCAAGGAGCAGATCAAGGGCACAGTGAGACTTCTTTTCCAACCTGCCGAGGAAGGTGGT
GCGGGTGCATCTTACATGATAAAAGATGGTGTTCTTGATGGCGTTGAAGCTATATTCGGG
ATGCATGTTGACTATCGGATGCCAACAGGTGTAATAGCAGCTCATGCAGGGCCTACACAA
GCTGCTGTATGTTTTTATGAAGCAAAAATAGAAGGTAAAACTGGAAAGGCTGAAACTCCA
CACTTAAATGTGGATCCTATTGTTGCTGCATCATTTGTCATCCTATCCCTGCAGCAGCTC
ATTTCAAGAGAAGATGATCCTCTTCACAGCCAGGTGCTCTCAGTTACCTATGTCAAGGGT
GGG

Peptide Sequence

PEP ID

Os04t0521800-02
PEP Infomation

pep chromosome:IRGSP-1.0:4:26114769:26117220:1 gene:Os04g0521800 transcript:Os04t0521800-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ILL5 description:Peptidase M20 family protein. (Os04t0521800-01);Similar to OSIGBa0131L05.10 protein. (Os04t0521800-02)
Sequence

MAAPLFLLLLLLLVSSASAGYEEEALLRRAEEERDWMVGVRRRIHAHPELAFREHHTSAL
VRDELERLGLTARAVAGTGVVADVGSGLPPVVALRADMDALPVQELVEWEHKSKVDGVMH
ACGHDVHTAMLLGAAKLLSERKEQIKGTVRLLFQPAEEGGAGASYMIKDGVLDGVEAIFG
MHVDYRMPTGVIAAHAGPTQAAVCFYEAKIEGKTGKAETPHLNVDPIVAASFVILSLQQL
ISREDDPLHSQVLSVTYVKGG

Transcript Sequence

Transcript ID

Os04t0521800-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:4:26114769:26117220:1 gene:Os04g0521800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ILL5 description:Peptidase M20 family protein. (Os04t0521800-01);Similar to OSIGBa0131L05.10 protein. (Os04t0521800-02)
Sequence

AGGCTTCCAATTCCAACTACCACCGCTTCACCATGGCCGCTCCTCTCTTCCTCCTCCTCC
TCCTCCTCCTCGTCTCCTCCGCCTCCGCGGGTTACGAGGAGGAGGCGCTGCTGCGGCGCG
CGGAGGAGGAGCGGGACTGGATGGTGGGCGTGCGGCGCCGCATCCACGCCCATCCGGAGC
TCGCGTTCCGGGAGCACCACACCAGCGCCCTCGTCCGCGACGAGCTGGAGCGGCTCGGCC
TCACCGCCCGCGCGGTCGCCGGCACCGGCGTCGTCGCCGACGTCGGCTCCGGCCTCCCCC
CCGTCGTCGCCCTCCGCGCCGACATGGACGCCCTCCCCGTCCAGGAATTAGTGGAGTGGG
AACACAAGAGCAAAGTGGATGGTGTGATGCATGCCTGCGGTCATGATGTGCACACCGCGA
TGCTCCTGGGAGCTGCAAAGTTGCTTAGTGAGCGCAAGGAGCAGATCAAGGGCACAGTGA
GACTTCTTTTCCAACCTGCCGAGGAAGGTGGTGCGGGTGCATCTTACATGATAAAAGATG
GTGTTCTTGATGGCGTTGAAGCTATATTCGGGATGCATGTTGACTATCGGATGCCAACAG
GTGTAATAGCAGCTCATGCAGGGCCTACACAAGCTGCTGTATGTTTTTATGAAGCAAAAA
TAGAAGGTAAAACTGGAAAGGCTGAAACTCCACACTTAAATGTGGATCCTATTGTTGCTG
CATCATTTGTCATCCTATCCCTGCAGCAGCTCATTTCAAGAGAAGATGATCCTCTTCACA
GCCAGGTGCTCTCAGTTACCTATGTCAAGGGTGGG