Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0517300-01
CDS Infomation	cds chromosome:IRGSP-1.0:4:25855678:25860031:-1 gene:Os04g0517300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ROOT UV-B SENSITIVE 2 description:Protein of unknown function DUF647 family protein. (Os04t0517300-01)
Sequence	ATGAACATACTCGAGAGGATACGCGGAGGCGGCGACAGGGCGGCCGTGGGGGAGGGGCCG CGGGAGCCGGAGCCATGGGTGGAGATTTCGGAGTCCATCTCTCGGCTCTGCAGCTTCGAC GCCGGCAGAGTCTCTGTAAAAGTTATCCAAGATTCGAGACCAATACATGATAAGATGATC GATTCTTTCTTGAACAAATTTTTTCCATCAGGCTATCCATACAGTGTGAATGAGGGTTAC CTAACTTACACCAAATTCCGAGCGCTCCAGCATTTTTCTAGTGCTATGCTGCATGTGCTA TCAACCCAGTCTTTGTTGTTTGCTGCAGGTTTGCGACCTACCCCTGCACAAGCAACTGCT GTAAGTTGGATTCTAAAAGATGGAATGCAGCACGCAGGAAAGCTCATATGTAGTGGCATG GGGGCAAGAATGGATTCAGAGCCAAAGAGTTGGAGGATACTTGCTGATGTTCTCTATGAT TTTGGTACTGCCTTAGAAGTCATTTCACCTTTGTGCCCACAACTTTTTCTTGAAGTAGCA GGCTTCGGAAACTTTGCAAAGGGAATGGCTGTTGTTGCAGCAAGAGCGACAAGGCTACCA ATCTATTCTTCTTTTGCCAAGGAAGGTAACCTTAGTGACTTATTTGCTAAAGGGGAAGCC ATCTCAACACTTTTCAATGTCATGGGAATAGGTGCTGGCATTGGATTAGCATCTACGGTG TGCTCAACAACTCAAGGGAAGTTAATTGCAGGCCCATTGCTTTCTGTTGTACATATATAT GGAGTTGTGCAAGAGATGAGGGCAACTCCTGTAAACACACTTAATCCGCAAAGAACAGCA ATGATTGTTGCTGATTTTATCAAGAGTGGAAAGGTTTCCAGCCCAGCTGAGCTAAGATAT CGAGAAGATCTTCTTTTTCCTAACCGATTAATAGAAGAAGCAGGAAGTGTGAAAATTGGA CAACCAGTCCGCAGAGTTCTTAGCCCACAGCGTATCGAACAGCTGAAAGCAACTTTCTCA AAGGAGAAATTTTTGCTTAGTCGAAAAGACAACAGTGCATACATGGTTCTTGAGCAGAGT GCAACGGGAGAAGATGCACTGAGGGGATGGCTAGTTGCTGCCTTTGCTTCAGAAATGGAA AGATCAGGTGTTGGTTCAGGTGATACAGTTCTAAATGTAGCCTACGAGAGGATGGAGAAT GTGTTCCCCATGTTTGTGGCAGAAGTTAAGAGTAGAGGCTGGTACACAGATCAATTTTTA GACGGAAATCGGAGTCGAATTGCATATGCAAATCCCATCAGCGGTAGTGCTTTATGA

Peptide Sequence

PEP ID	Os04t0517300-01
PEP Infomation	pep chromosome:IRGSP-1.0:4:25855678:25860031:-1 gene:Os04g0517300 transcript:Os04t0517300-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ROOT UV-B SENSITIVE 2 description:Protein of unknown function DUF647 family protein. (Os04t0517300-01)
Sequence	MNILERIRGGGDRAAVGEGPREPEPWVEISESISRLCSFDAGRVSVKVIQDSRPIHDKMI DSFLNKFFPSGYPYSVNEGYLTYTKFRALQHFSSAMLHVLSTQSLLFAAGLRPTPAQATA VSWILKDGMQHAGKLICSGMGARMDSEPKSWRILADVLYDFGTALEVISPLCPQLFLEVA GFGNFAKGMAVVAARATRLPIYSSFAKEGNLSDLFAKGEAISTLFNVMGIGAGIGLASTV CSTTQGKLIAGPLLSVVHIYGVVQEMRATPVNTLNPQRTAMIVADFIKSGKVSSPAELRY REDLLFPNRLIEEAGSVKIGQPVRRVLSPQRIEQLKATFSKEKFLLSRKDNSAYMVLEQS ATGEDALRGWLVAAFASEMERSGVGSGDTVLNVAYERMENVFPMFVAEVKSRGWYTDQFL DGNRSRIAYANPISGSAL

Transcript Sequence

Transcript ID	Os04t0517300-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:25855678:25860031:-1 gene:Os04g0517300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ROOT UV-B SENSITIVE 2 description:Protein of unknown function DUF647 family protein. (Os04t0517300-01)
Sequence	GAGGAGCAAAAATTCCGGTGGAAACACGTCCGTCGCCCGTGACGAGGTGGAAACCCAAAA CCTCGTCGGCGGCTTCCCCAATCCCCTCCCTCCGCCGCCGCCGTCTCGGTCTCGCCGGAT AAGGAGGAGGAGGAGAGGAGATCGCCGGCGAGTCCCTCCCGAATGAACATACTCGAGAGG ATACGCGGAGGCGGCGACAGGGCGGCCGTGGGGGAGGGGCCGCGGGAGCCGGAGCCATGG GTGGAGATTTCGGAGTCCATCTCTCGGCTCTGCAGCTTCGACGCCGGCAGAGTCTCTGTA AAAGTTATCCAAGATTCGAGACCAATACATGATAAGATGATCGATTCTTTCTTGAACAAA TTTTTTCCATCAGGCTATCCATACAGTGTGAATGAGGGTTACCTAACTTACACCAAATTC CGAGCGCTCCAGCATTTTTCTAGTGCTATGCTGCATGTGCTATCAACCCAGTCTTTGTTG TTTGCTGCAGGTTTGCGACCTACCCCTGCACAAGCAACTGCTGTAAGTTGGATTCTAAAA GATGGAATGCAGCACGCAGGAAAGCTCATATGTAGTGGCATGGGGGCAAGAATGGATTCA GAGCCAAAGAGTTGGAGGATACTTGCTGATGTTCTCTATGATTTTGGTACTGCCTTAGAA GTCATTTCACCTTTGTGCCCACAACTTTTTCTTGAAGTAGCAGGCTTCGGAAACTTTGCA AAGGGAATGGCTGTTGTTGCAGCAAGAGCGACAAGGCTACCAATCTATTCTTCTTTTGCC AAGGAAGGTAACCTTAGTGACTTATTTGCTAAAGGGGAAGCCATCTCAACACTTTTCAAT GTCATGGGAATAGGTGCTGGCATTGGATTAGCATCTACGGTGTGCTCAACAACTCAAGGG AAGTTAATTGCAGGCCCATTGCTTTCTGTTGTACATATATATGGAGTTGTGCAAGAGATG AGGGCAACTCCTGTAAACACACTTAATCCGCAAAGAACAGCAATGATTGTTGCTGATTTT ATCAAGAGTGGAAAGGTTTCCAGCCCAGCTGAGCTAAGATATCGAGAAGATCTTCTTTTT CCTAACCGATTAATAGAAGAAGCAGGAAGTGTGAAAATTGGACAACCAGTCCGCAGAGTT CTTAGCCCACAGCGTATCGAACAGCTGAAAGCAACTTTCTCAAAGGAGAAATTTTTGCTT AGTCGAAAAGACAACAGTGCATACATGGTTCTTGAGCAGAGTGCAACGGGAGAAGATGCA CTGAGGGGATGGCTAGTTGCTGCCTTTGCTTCAGAAATGGAAAGATCAGGTGTTGGTTCA GGTGATACAGTTCTAAATGTAGCCTACGAGAGGATGGAGAATGTGTTCCCCATGTTTGTG GCAGAAGTTAAGAGTAGAGGCTGGTACACAGATCAATTTTTAGACGGAAATCGGAGTCGA ATTGCATATGCAAATCCCATCAGCGGTAGTGCTTTATGACAACAATTTTCGGAGTTGAAG AGATGAGCAGATAACTTATTTTTCACTTTGCATTGTTTGTAAAACATTTGTTTTAATGAA ATAGGCCCATCGTGTCTTGAGTATAGACATGGTAAATGTATCACTGAATCGAGTGAATGC TTTCTGACGGCCAGAATTTAAATCGATAGCAACTGCTAGTTC