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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os04t0512500-01
CDS Infomation

cds chromosome:IRGSP-1.0:4:25618621:25619338:-1 gene:Os04g0512500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to OSIGBa0157K09-H0214G12.24 protein. (Os04t0512500-01)
Sequence

ATGTCGCTCAGCGAGAAGCTGGAGGCGGCACGTGTCGCGGTCGGCAAGCGCAAGGAGCGG
GAGCTCCTGGCTCAGGCTCCGGCTAATAAAGCTCTAGCCGAGCCGGGTACTAATAAGCCG
GCTCCGGGGCCGGTCCCCAACAACAAGCTCCTAGCCGGTCACCTGGCGCACGAGTTCCTG
ACCCGCGGCACGCTCCAGGGCCGCCGGGTCGAGCCGACGAAGCCGAGCCAAGCCGCCGCC
TTGCATCCCGGCGAGCCCGTGCCCGAGCCGGAGCCCGACGCCGCCAAGCGGAGGAGGTAC
GCCGAGGTGTCGTGGCTCCTCATGGCGAGCGGGGCCCGCGTCCCCGGCGTCGTCAACCCG
ACGCAGCTCGGCCGCTGGCTCCAGATAAAGGAGTGA

Peptide Sequence

PEP ID

Os04t0512500-01
PEP Infomation

pep chromosome:IRGSP-1.0:4:25618621:25619338:-1 gene:Os04g0512500 transcript:Os04t0512500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to OSIGBa0157K09-H0214G12.24 protein. (Os04t0512500-01)
Sequence

MSLSEKLEAARVAVGKRKERELLAQAPANKALAEPGTNKPAPGPVPNNKLLAGHLAHEFL
TRGTLQGRRVEPTKPSQAAALHPGEPVPEPEPDAAKRRRYAEVSWLLMASGARVPGVVNP
TQLGRWLQIKE

Transcript Sequence

Transcript ID

Os04t0512500-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:4:25618621:25619338:-1 gene:Os04g0512500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to OSIGBa0157K09-H0214G12.24 protein. (Os04t0512500-01)
Sequence

TCTTTGACGGCTCTGACTCGTGCTGACGTGGCACGTGGCGAACGACCCTCAGCCGTCGAT
ATGTCGCTCAGCGAGAAGCTGGAGGCGGCACGTGTCGCGGTCGGCAAGCGCAAGGAGCGG
GAGCTCCTGGCTCAGGCTCCGGCTAATAAAGCTCTAGCCGAGCCGGGTACTAATAAGCCG
GCTCCGGGGCCGGTCCCCAACAACAAGCTCCTAGCCGGTCACCTGGCGCACGAGTTCCTG
ACCCGCGGCACGCTCCAGGGCCGCCGGGTCGAGCCGACGAAGCCGAGCCAAGCCGCCGCC
TTGCATCCCGGCGAGCCCGTGCCCGAGCCGGAGCCCGACGCCGCCAAGCGGAGGAGGTAC
GCCGAGGTGTCGTGGCTCCTCATGGCGAGCGGGGCCCGCGTCCCCGGCGTCGTCAACCCG
ACGCAGCTCGGCCGCTGGCTCCAGATAAAGGAGTGACGTGCCGGCGACCAGACATCACAA
CCCCAGGTGGTTTTCCCCCTTTTCACCGGGGAGAACCGACACATCATCAAACCGGTTTCT
TCGTTTTCTCCTCCTCTTTGCCTGCTCCTCCTGTTTAGATTTTAGATCTAGGAGAGAAAA
AGAAAAAAAAAACGTTGGTGTACTAGCAGCTTTATTCGATGAAATTATTGTTGTTATTCA
AAACCAATGACCAGAATGGTCCAGCTTTCTATAGAAAGCGCGATTTCTTGTTAGTACT