Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0511600-02
CDS Infomation	cds chromosome:IRGSP-1.0:4:25573704:25579436:-1 gene:Os04g0511600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RING finger protein description:Similar to RING-H2 finger protein ATL3G. (Os04t0511600-01);Similar to OSIGBa0157K09-H0214G12.17 protein. (Os04t0511600-02)
Sequence	ATGGTTGACATAAACCCTGATCACATCTTTGAGGTTCCGGACACCCCTGACCGAATACAG CAGTCAACATGCCCTGTATCTAGCCCAGCTGCTAGGAGAGGTATTGCAAAAGCAGCTGGA ACTCCATTACCATCGCGAAGAATTAAATTTAAGATCACAAATAACTCCATCCAGGGTCAA TCAAGTAGAGGCAATGCAAGTAGTGTGTCGCCTGCACCTTTAGATGCTGGCGATATTTTT AAACAAGCCGAGTTGGCACGATTGCTGCCAGTGGCAGAAGATCCTGAAGCAAGATCATCC TTGCTAAAATCAGGTCGGACGATAGAGACATCTGTTGAGAATGAAAAGGTGCCAAAAAAA TCTGGTTTGGATCAGAGCATGAATATTTCAAACAATATAAATTGCAGGGGCTCTGGAGAA AGGGACCGTAGTTGCCAAATCAGAAAAGGGGATATTAGTGCACGGGATGCCAATAGCTGC AATGCTGACTTTCTCTGTTTAGGATCAGGTCTTCCTACTACTACGGTGGGAAAACCACGA AACAGAATGGGGACTATCACCTTTAAGAAGCCGAAGGAAGTAGTAGGTGCTAATGTCTGT TCAGTATCGAGTCCTAGAGAGGGCAAAGGGGAAGAGATCACTGACAAGGGCACAACAGGA ATTTCAAGCTCTACACCAAGCATTGTTCCTCAAAGGCATGTGGGCCAAAGAAAGCTGGTG CGGAATGGTTGTATTTCTCCCTCCAACATAGCCAAAAGAAGTCTGAAGGTTGATGAAAAG CGAGAAATATGCTCTACAAGTGGACTCTTACACTATCCAGATACTCAGGTTGATGCTTCT GGGAAGGGAAATGTGATAGATCTTACTGATAGTTCACCTATAATAAGAAGGCAGGGAAAC ACTGCAACTGACATGGAAAAAAGGTCAGGGAGAAAGTCGGCAATAGGCAGAGCTGGGGAG ACGGTAATTCCACTGGCTGCAAATCAAGTGAACAGTATTTTTTCTGAAGGTAACAAGAAT AAAGGAAAAGAAATTTCCCATGATGTCGTGGGTGCTAAGCAGTCTGGAGAGGCTTATATG AGGAGGGTTTGTCCAAGATCCATGGGAGATTCTTCTTCCGTTGCAAACAATGATCACACC GGTATAGGTTCTGAGCAAGGTTGGAGAACAACGCACAATAATACTAGTAATATACCCATG CCACTATCAGGTAAGATGACCAATAGTTGTGGAAGAGAATCTGGATCTTCTGAACAGTCT AATCTGGATCGAGCATCTGCAGCAGGAGACAGCAATAACTCAATTGAGGGAGGAGACAAC AATAACTCAATTGGTGGAGCAAAAACATTGCAGACTGCTAGTTTTGTTAATAGAACAATA AGGATCAGTAGCAGAAAGAGGAAGCGCATCGCAAGTTCTTACCATCCTGGTGAAAGCTCT AGCTCTGTTGATGTTGATCAACCTAGAGTTGCATCATCAGACTCAACAGCTGCTAGAAAT CATACCACTCACCGTCATCATATTCCTGTAGTAGATATTGATGACATATGCTCTCCTGAA GTAAGGCCTAGTTTGAGTGGGATTGGTAGCAGCAATCGGACCTCAGTGGATCCCAACATA AGAGAACAGTTGGAGTCTGATGAGTTATTGGCTCGCCAACTTCAGGAGCAGCTTTACAAT GAAACTCCTCATGTTGTTCCCACAGAAGAGATTGATGCGATCATAGCAATGTCACTTCAA CATGAAGATAATGCGCAGCCGACATCTAGAACTGCGAGGCGGTTCCAAAGCACTACAAGA GGTCCAAGGGTATTGCGTTCAACTGTTCCTCAGCATGCTAATAGGGTTCGATATGACTCA AACAACAGAAGAATAATTTACCAGATACCCTGCTGCACATATTCAACCTAA

Peptide Sequence

PEP ID	Os04t0511600-02
PEP Infomation	pep chromosome:IRGSP-1.0:4:25573704:25579436:-1 gene:Os04g0511600 transcript:Os04t0511600-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RING finger protein description:Similar to RING-H2 finger protein ATL3G. (Os04t0511600-01);Similar to OSIGBa0157K09-H0214G12.17 protein. (Os04t0511600-02)
Sequence	MVDINPDHIFEVPDTPDRIQQSTCPVSSPAARRGIAKAAGTPLPSRRIKFKITNNSIQGQ SSRGNASSVSPAPLDAGDIFKQAELARLLPVAEDPEARSSLLKSGRTIETSVENEKVPKK SGLDQSMNISNNINCRGSGERDRSCQIRKGDISARDANSCNADFLCLGSGLPTTTVGKPR NRMGTITFKKPKEVVGANVCSVSSPREGKGEEITDKGTTGISSSTPSIVPQRHVGQRKLV RNGCISPSNIAKRSLKVDEKREICSTSGLLHYPDTQVDASGKGNVIDLTDSSPIIRRQGN TATDMEKRSGRKSAIGRAGETVIPLAANQVNSIFSEGNKNKGKEISHDVVGAKQSGEAYM RRVCPRSMGDSSSVANNDHTGIGSEQGWRTTHNNTSNIPMPLSGKMTNSCGRESGSSEQS NLDRASAAGDSNNSIEGGDNNNSIGGAKTLQTASFVNRTIRISSRKRKRIASSYHPGESS SSVDVDQPRVASSDSTAARNHTTHRHHIPVVDIDDICSPEVRPSLSGIGSSNRTSVDPNI REQLESDELLARQLQEQLYNETPHVVPTEEIDAIIAMSLQHEDNAQPTSRTARRFQSTTR GPRVLRSTVPQHANRVRYDSNNRRIIYQIPCCTYST

Transcript Sequence

Transcript ID	Os04t0511600-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:25573704:25579436:-1 gene:Os04g0511600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RING finger protein description:Similar to RING-H2 finger protein ATL3G. (Os04t0511600-01);Similar to OSIGBa0157K09-H0214G12.17 protein. (Os04t0511600-02)
Sequence	TATTTTCTTCGGTTAGTTGTTGCGGCCTCGCTGGGATTTGGGGATTTTCGGCCCAATCTC GCTTGTGGCAGTCCCCTCCCGCCGCAGCGGCGGTTCTCGATAGGCGGAGGCCCCTCCCCT GATCTCGCGTGGAGCGGAAGGGAGATCCATGATCCATCTAGGGTGATTTGTTTTTACTGG TAGTTTTGATCTGTTGTTCCAAGAACGATTTTGTTCTTTGCTGTGTGCAATCAAATACGT ATCTCAGTATTTAATAAGACACCCAAATCCATCATATCACTTGTGTGGATTTAATCGATT TAGTTCTAATAGCAGCTTATTTCCCCAAATTTTTGGTTCACGCCCCACTTTAAGACTTCT CCTAAGAGATGGGGTGCAGTACAAGATTGTTAATTCGATGTTAGAACAGCCATTTACATT TCTTCTATTGATTTTCAGATGGGTGAAATATTGATGATGTATTTGTATTTTAGAGGGGGG TATCATTACCCTGCCATTTTGTAGCTGGAGTTATGATTTTTCTCTCTGTCGAGTTGAACC AATTTTAGTTCTTTAACAGTAGTAGTAGGTCATAGGTACTGATTTCCTTATAATTTACAA AGACAAAATATCTCATCTTTAGACCCCCATTTGTTGCAAGTTCATATATTCTGTTTTGAA TCAACTCTAGCAAGCGGTGGATTTCACGATAAGTAGAAAGTACTGATTATTATTTGCACT TGAATAATTATATCTGGAAGCTAGAATTGAGTATTCAAGGAAGCATGCTCTTTGAAGAAA GTATTCACTTGATCCAGTCCAGTTTGTTGTTTACTTCTACATTTCTTTCTTTGGCAATAT ATTTGGGAGCAGCTTGTGAATCCAGTGAAAATGGTCCAGACCATCATTGTTACTTACACT TCATGACCTCGTTCCTTCACCAACCAGATTAAGGATTCCAGCATCCACCTCCATGTTGGC CATCATCTTGTGGGTTCTGGTGCCAAGCACCTGCTGCATGTTACTACAGAAACAGTTCCC CTTTTCTTTTCTTTTTTACTGCAGACCAAATTTTCCTGCTAAGTTTATTTGTTCTTTCTA AAACAAATCTTACTTACTGGTTCTTGTTGTAAGGCAGCTCTTTTCATAACATCTCTGTAT CTTGTAGGAAGTGTTGGAGAATTTTAATCATAAATTGACATGTAAAGGAGAGGAGGCAAG CTATCTGTAACTGAAATAGTTTCGGTGGGATACCATGGTTGACATAAACCCTGATCACAT CTTTGAGGTTCCGGACACCCCTGACCGAATACAGCAGTCAACATGCCCTGTATCTAGCCC AGCTGCTAGGAGAGGTATTGCAAAAGCAGCTGGAACTCCATTACCATCGCGAAGAATTAA ATTTAAGATCACAAATAACTCCATCCAGGGTCAATCAAGTAGAGGCAATGCAAGTAGTGT GTCGCCTGCACCTTTAGATGCTGGCGATATTTTTAAACAAGCCGAGTTGGCACGATTGCT GCCAGTGGCAGAAGATCCTGAAGCAAGATCATCCTTGCTAAAATCAGGTCGGACGATAGA GACATCTGTTGAGAATGAAAAGGTGCCAAAAAAATCTGGTTTGGATCAGAGCATGAATAT TTCAAACAATATAAATTGCAGGGGCTCTGGAGAAAGGGACCGTAGTTGCCAAATCAGAAA AGGGGATATTAGTGCACGGGATGCCAATAGCTGCAATGCTGACTTTCTCTGTTTAGGATC AGGTCTTCCTACTACTACGGTGGGAAAACCACGAAACAGAATGGGGACTATCACCTTTAA GAAGCCGAAGGAAGTAGTAGGTGCTAATGTCTGTTCAGTATCGAGTCCTAGAGAGGGCAA AGGGGAAGAGATCACTGACAAGGGCACAACAGGAATTTCAAGCTCTACACCAAGCATTGT TCCTCAAAGGCATGTGGGCCAAAGAAAGCTGGTGCGGAATGGTTGTATTTCTCCCTCCAA CATAGCCAAAAGAAGTCTGAAGGTTGATGAAAAGCGAGAAATATGCTCTACAAGTGGACT CTTACACTATCCAGATACTCAGGTTGATGCTTCTGGGAAGGGAAATGTGATAGATCTTAC TGATAGTTCACCTATAATAAGAAGGCAGGGAAACACTGCAACTGACATGGAAAAAAGGTC AGGGAGAAAGTCGGCAATAGGCAGAGCTGGGGAGACGGTAATTCCACTGGCTGCAAATCA AGTGAACAGTATTTTTTCTGAAGGTAACAAGAATAAAGGAAAAGAAATTTCCCATGATGT CGTGGGTGCTAAGCAGTCTGGAGAGGCTTATATGAGGAGGGTTTGTCCAAGATCCATGGG AGATTCTTCTTCCGTTGCAAACAATGATCACACCGGTATAGGTTCTGAGCAAGGTTGGAG AACAACGCACAATAATACTAGTAATATACCCATGCCACTATCAGGTAAGATGACCAATAG TTGTGGAAGAGAATCTGGATCTTCTGAACAGTCTAATCTGGATCGAGCATCTGCAGCAGG AGACAGCAATAACTCAATTGAGGGAGGAGACAACAATAACTCAATTGGTGGAGCAAAAAC ATTGCAGACTGCTAGTTTTGTTAATAGAACAATAAGGATCAGTAGCAGAAAGAGGAAGCG CATCGCAAGTTCTTACCATCCTGGTGAAAGCTCTAGCTCTGTTGATGTTGATCAACCTAG AGTTGCATCATCAGACTCAACAGCTGCTAGAAATCATACCACTCACCGTCATCATATTCC TGTAGTAGATATTGATGACATATGCTCTCCTGAAGTAAGGCCTAGTTTGAGTGGGATTGG TAGCAGCAATCGGACCTCAGTGGATCCCAACATAAGAGAACAGTTGGAGTCTGATGAGTT ATTGGCTCGCCAACTTCAGGAGCAGCTTTACAATGAAACTCCTCATGTTGTTCCCACAGA AGAGATTGATGCGATCATAGCAATGTCACTTCAACATGAAGATAATGCGCAGCCGACATC TAGAACTGCGAGGCGGTTCCAAAGCACTACAAGAGGTCCAAGGGTATTGCGTTCAACTGT TCCTCAGCATGCTAATAGGGTTCGATATGACTCAAACAACAGAAGAATAATTTACCAGAT ACCCTGCTGCACATATTCAACCTAATATTGATCTAAATGATTATGATGCACTGCTTGCAT TAGATGAAAATAACCACCAGCATGCTGGTGCTTCAGAAAGCCAGATCAATAATTTGCCTC AGTCAGTAATCCAGTCAAATATTGAAGAGCCGTGTGCAGTTTGCCTTGATAATCCCTCTA TTGGTGATACGATCCGCCGCTTGCCATGCTTTCACATGTTCCATAAAGAATGCATAGACG AATGGCTAAGAAGGAAGAAACTATGTCCAGTTTGCAAGTCTGGGATCACATAAAGGTGAC AATTCGGTTCCATGAATATTCTGCCCTTAGACTCAAGAAAACAGAAGGAAGTCGCCTGCA ACAGTGGTTGCGTTTCTATCTTTAGACGACAGTGGTATCGGCGGGAGGTTGCGCAATCTT GTAGAGCCTTGTTCTAATTGCCTTCGGTGCTAATTCTCTGTTTTGTGGGTTTAGGCACGA TATTTTGTATATCCATGTGTTTTATTCATCAACTGGCATAAAAGGTCATTATCGATTGAT TGCTTATCAGCC