Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os04t0511400-02
CDS Infomation

cds chromosome:IRGSP-1.0:4:25567723:25571247:-1 gene:Os04g0511400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Sugar/inositol transporter domain containing protein. (Os04t0511400-01);Sugar/inositol transporter domain containing protein. (Os04t0511400-02)
Sequence

ATGGAAGGGGGTGCAACTCTAGCTGATAAGGCTGAATTTAAGGAATGTCTGCGGCTGACC
TGGAGCCAGCCTTACATTCTTCAGCTTGTTTTCTCTGCCGGCATCGGTGGTCTTCTTTTC
GGATATGATACAGGTGTCATATCTGGAGCACTTCTGTATATTCGAGATGATTTTACTGCG
GTCGAAAAGAGCACTGTACTTAGGGAAACGATAGTGAGTATGGCTGTAGCTGGAGCCATA
GTTGGAGCAGGATTTGGTGGCTGGATGAACGACAAGTTTGGAAGGAAGCCTTCCATCTTG
ATCGCCGATTCCCTGTTCCTCGCAGGTGCCTTGATCATGGCCCTTGCCCCAACACCGTTT
GTCATCATTATTGGGAGGATCTTTGTTGGTCTTGGGGTTGGAATGGCTTCCATGACAGCA
CCTTTGTACATTTCTGAAGCCTCTCCAGCTAGAATCAGAGGTGCACTTGTGAGCACAAAT
GGACTTCTTATTACCGGAGGGCAGTTCATGGCATACCTCATTAATCTGGCCTTCACTAAG
GTAAAGGGAACATGGAGGTGGATGCTTGGCATTGCAGGTCTTCCTGCTTTTATTCAGTTC
ATATTGATGTGTATGCTACCTGAATCACCAAGGTGGCTATACAGACAGGATAGGAAAGAG
GAGGCTGAAGCCATATTAAGGAAGATTTACCCCGCGGCTGAGGTTGAAGAAGAGATCGAT
TCGATGCGCCGATCAATTGAACATGAGAAACAACTGGAGGGCTCCATCGGCGAGCAGAGT
CTGGTTGGCAAGCTGACGAAGGCACTGAGCAGCAAGGTCGTCCGCCGTGGGCTCATGGCC
GGCGTCATCGCGCAGGTCGCCCAGCAGTTCGTCGGCATCAACACCGTCATGTACTACAGC
CCGACGATCGTCCAGCTGGCCGGCTTCGCGTCGAACAACACGGCCATGGCGCTGTCCCTC
ATCACCTCGGGCCTCAACGCCATCGGGTCCATCGTCAGCATGTTCTTCGTGGACAGGGCC
GGCCGCCGTCGCCTGATGATCATCAGCCTCGTCGGCATCGTCCTGTGGCTCGCCGTGCTC
GGCGGCACGTTCCTCGGCGCCGCGCACCACGCGCCGCCGGTCAGCGACCTGGAGACGCGG
GTGTTCGCCAACCAGACGTGCCCGGAGTACAGCCCGAGCGCCCGCTGGAACTGCATGAAC
TGCCTCAAGGCCCAGTCCACCTGCGGCTTCTGCGCCCACGGAGGAAACAAGCTCCTCCCC
GGCGCGTGCCTGGCGGCGGGCGAAGCGTCGCGGCGGACGTGCCACGCGGGGAACCGGGAG
TTCTACACGGAAGGGTGCCCCAACAACTTCGGGTGGCTGGCGCTGGTGGCGCTCGGCGCG
TACATCGTCTCCTACTCCCCGGGCATGGGCACCGTGCCATGGATCGTCAACTCGGAGATC
TACCCGCTGCGGTTCAGGGGCGTCTGCGGCGGCATCGCGGCGGTGGCCAACTGGGTGTCC
AACCTCATCGTCACGCAGACGTTCCTGAGCCTCACCAAGGCGCTGGGCACGTCGGCCACC
TTCTTCCTCTTCTGCGCCGTCTCCTTCTTCGCGCTCGTCGTCGTCTTCTTCACCGTGCCG
GAGACCAAGGGACTGCAGTTCGAGGAGGTGGAGAAGATGCTCGGGGAGAAGGACTACAAG
CCGTGGAAGAGATACCGTCCCGACGTGTCGTCCAAAGGGCGCGACATCGGCCTCTCTGTT
CCATGA

Peptide Sequence

PEP ID

Os04t0511400-02
PEP Infomation

pep chromosome:IRGSP-1.0:4:25567723:25571247:-1 gene:Os04g0511400 transcript:Os04t0511400-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Sugar/inositol transporter domain containing protein. (Os04t0511400-01);Sugar/inositol transporter domain containing protein. (Os04t0511400-02)
Sequence

MEGGATLADKAEFKECLRLTWSQPYILQLVFSAGIGGLLFGYDTGVISGALLYIRDDFTA
VEKSTVLRETIVSMAVAGAIVGAGFGGWMNDKFGRKPSILIADSLFLAGALIMALAPTPF
VIIIGRIFVGLGVGMASMTAPLYISEASPARIRGALVSTNGLLITGGQFMAYLINLAFTK
VKGTWRWMLGIAGLPAFIQFILMCMLPESPRWLYRQDRKEEAEAILRKIYPAAEVEEEID
SMRRSIEHEKQLEGSIGEQSLVGKLTKALSSKVVRRGLMAGVIAQVAQQFVGINTVMYYS
PTIVQLAGFASNNTAMALSLITSGLNAIGSIVSMFFVDRAGRRRLMIISLVGIVLWLAVL
GGTFLGAAHHAPPVSDLETRVFANQTCPEYSPSARWNCMNCLKAQSTCGFCAHGGNKLLP
GACLAAGEASRRTCHAGNREFYTEGCPNNFGWLALVALGAYIVSYSPGMGTVPWIVNSEI
YPLRFRGVCGGIAAVANWVSNLIVTQTFLSLTKALGTSATFFLFCAVSFFALVVVFFTVP
ETKGLQFEEVEKMLGEKDYKPWKRYRPDVSSKGRDIGLSVP

Transcript Sequence

Transcript ID

Os04t0511400-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:4:25567723:25571247:-1 gene:Os04g0511400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Sugar/inositol transporter domain containing protein. (Os04t0511400-01);Sugar/inositol transporter domain containing protein. (Os04t0511400-02)
Sequence

GTCCCGGGCTCCCGGCAGCCTGGGGTTTCTCTCCCCGTTTCTGTTTCTCGGTGAGGTGAA
GTTTTCCGTCTCAGCACACTGCCAGTTCTTCTTCTTGTTCTTCCTACTCGTGGCGCCGCG
GCGTCCTCACGGATCGCAAGGTCGGGAATTATCTGGGGTTCTCGGGGTTTGTGGCTCCTT
TCCGGTGAAAGGATTCTTTTTTAGCGGGAGATCGGTTGAGTCGGTTTCTTCTGTAGATCT
TATCGTTGAGATTTCGTTGTTTATGTTAGGCGAGTCGGGGTGAGACTTATCCGCGTTCCT
CCCTGCGATGAAACACGCGATTTTGGATTGTCGTTACGTTTAGGGATTGTGGTTTTAAGG
CTGTTCTTCCGTTGTAAATGTTGGTTGCGCCATCCTATAAAAGAAAGGGACTCCTGTCGA
GAAACACACCATGCTTCTTCTGTCCTGAAGGTTTGGAAAGGCACATTCTGAGGAGATTTT
TCTGTCCTACATCGTAGCCCTTGAATGCAATGGAAGGGGGTGCAACTCTAGCTGATAAGG
CTGAATTTAAGGAATGTCTGCGGCTGACCTGGAGCCAGCCTTACATTCTTCAGCTTGTTT
TCTCTGCCGGCATCGGTGGTCTTCTTTTCGGATATGATACAGGTGTCATATCTGGAGCAC
TTCTGTATATTCGAGATGATTTTACTGCGGTCGAAAAGAGCACTGTACTTAGGGAAACGA
TAGTGAGTATGGCTGTAGCTGGAGCCATAGTTGGAGCAGGATTTGGTGGCTGGATGAACG
ACAAGTTTGGAAGGAAGCCTTCCATCTTGATCGCCGATTCCCTGTTCCTCGCAGGTGCCT
TGATCATGGCCCTTGCCCCAACACCGTTTGTCATCATTATTGGGAGGATCTTTGTTGGTC
TTGGGGTTGGAATGGCTTCCATGACAGCACCTTTGTACATTTCTGAAGCCTCTCCAGCTA
GAATCAGAGGTGCACTTGTGAGCACAAATGGACTTCTTATTACCGGAGGGCAGTTCATGG
CATACCTCATTAATCTGGCCTTCACTAAGGTAAAGGGAACATGGAGGTGGATGCTTGGCA
TTGCAGGTCTTCCTGCTTTTATTCAGTTCATATTGATGTGTATGCTACCTGAATCACCAA
GGTGGCTATACAGACAGGATAGGAAAGAGGAGGCTGAAGCCATATTAAGGAAGATTTACC
CCGCGGCTGAGGTTGAAGAAGAGATCGATTCGATGCGCCGATCAATTGAACATGAGAAAC
AACTGGAGGGCTCCATCGGCGAGCAGAGTCTGGTTGGCAAGCTGACGAAGGCACTGAGCA
GCAAGGTCGTCCGCCGTGGGCTCATGGCCGGCGTCATCGCGCAGGTCGCCCAGCAGTTCG
TCGGCATCAACACCGTCATGTACTACAGCCCGACGATCGTCCAGCTGGCCGGCTTCGCGT
CGAACAACACGGCCATGGCGCTGTCCCTCATCACCTCGGGCCTCAACGCCATCGGGTCCA
TCGTCAGCATGTTCTTCGTGGACAGGGCCGGCCGCCGTCGCCTGATGATCATCAGCCTCG
TCGGCATCGTCCTGTGGCTCGCCGTGCTCGGCGGCACGTTCCTCGGCGCCGCGCACCACG
CGCCGCCGGTCAGCGACCTGGAGACGCGGGTGTTCGCCAACCAGACGTGCCCGGAGTACA
GCCCGAGCGCCCGCTGGAACTGCATGAACTGCCTCAAGGCCCAGTCCACCTGCGGCTTCT
GCGCCCACGGAGGAAACAAGCTCCTCCCCGGCGCGTGCCTGGCGGCGGGCGAAGCGTCGC
GGCGGACGTGCCACGCGGGGAACCGGGAGTTCTACACGGAAGGGTGCCCCAACAACTTCG
GGTGGCTGGCGCTGGTGGCGCTCGGCGCGTACATCGTCTCCTACTCCCCGGGCATGGGCA
CCGTGCCATGGATCGTCAACTCGGAGATCTACCCGCTGCGGTTCAGGGGCGTCTGCGGCG
GCATCGCGGCGGTGGCCAACTGGGTGTCCAACCTCATCGTCACGCAGACGTTCCTGAGCC
TCACCAAGGCGCTGGGCACGTCGGCCACCTTCTTCCTCTTCTGCGCCGTCTCCTTCTTCG
CGCTCGTCGTCGTCTTCTTCACCGTGCCGGAGACCAAGGGACTGCAGTTCGAGGAGGTGG
AGAAGATGCTCGGGGAGAAGGACTACAAGCCGTGGAAGAGATACCGTCCCGACGTGTCGT
CCAAAGGGCGCGACATCGGCCTCTCTGTTCCATGAAAGGAAGAAGAACAGTGTTTGGTTT
CAAGTTATTTGGGTTTTAACTAGCAATAATCTGTACTCAGTTTACATGTAGAGTGGCCGT
TGCCAATAGAAATTAATCAGTTGTTTCATTGTGTGACACATTTTAGAGCCTTTTCCCCTG
TGCTTAGAACGTTTGATGATTTTTATATAAGTAAATTGCGTCTTGGTCACCTTTTTC