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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os04t0511200-01
CDS Infomation

cds chromosome:IRGSP-1.0:4:25563419:25565153:-1 gene:Os04g0511200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:EF-hand, abscisic acid responsive 27-kDa protein description:EFA27 for EF hand, abscisic acid, 27kD. (Os04t0511200-01)
Sequence

ATGGCGGAGGAGGCGGCTAGCAAGGCAGCGCCGACCGATGCGCTGTCGTCCGTGGCGGCG
GAGGCGCCGGTGACGAGAGAACGGCCGGTCCGAGCGGACTTGGAAGTGCAGATTCCGAAG
CCCTATTTGGCCCGAGCTCTGGTTGCTCCGGACGTGTACCATCCTGAAGGAACCGAGGGG
CGTGACCACCGGCAGATGAGTGTGCTGCAGCAGCATGTGGCTTTCTTCGACCTGGATGGC
GACGGTATCGTTTATCCATGGGAAACTTATGGAGGACTACGGGAATTGGGCTTCAACGTG
ATTGTTTCGTTCTTTTTGGCGATAGCCATAAACGTTGGTCTAAGCTACCCAACTCTGCCA
AGCTGGATACCATCTCTCCTGTTCCCTATACACATAAAAAACATCCACAGGGCTAAGCAC
GGCAGCGATAGCTCGACGTACGACAACGAGGGAAGGTTTATGCCGGTCAATTTCGAGAGC
ATCTTCAGCAAGAACGCCCGCACGGCGCCGGACAAGCTCACGTTCGGCGATATCTGGCGG
ATGACCGAAGGCCAAAGGGTGGCGCTCGACTTGCTTGGGAGGATCGCGAGTAAGGGGGAG
TGGATATTGCTCTACGTGCTTGCGAAAGATGAGGAAGGATTCCTCAGGAAGGAGGCTGTT
CGCCGCTGCTTCGATGGGAGCCTATTCGAGTCGATTGCCCAGCAGAGAAGGGAGGCACAT
GAGAAGCAGAAGTAG

Peptide Sequence

PEP ID

Os04t0511200-01
PEP Infomation

pep chromosome:IRGSP-1.0:4:25563419:25565153:-1 gene:Os04g0511200 transcript:Os04t0511200-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:EF-hand, abscisic acid responsive 27-kDa protein description:EFA27 for EF hand, abscisic acid, 27kD. (Os04t0511200-01)
Sequence

MAEEAASKAAPTDALSSVAAEAPVTRERPVRADLEVQIPKPYLARALVAPDVYHPEGTEG
RDHRQMSVLQQHVAFFDLDGDGIVYPWETYGGLRELGFNVIVSFFLAIAINVGLSYPTLP
SWIPSLLFPIHIKNIHRAKHGSDSSTYDNEGRFMPVNFESIFSKNARTAPDKLTFGDIWR
MTEGQRVALDLLGRIASKGEWILLYVLAKDEEGFLRKEAVRRCFDGSLFESIAQQRREAH
EKQK

Transcript Sequence

Transcript ID

Os04t0511200-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:4:25563419:25565153:-1 gene:Os04g0511200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:EF-hand, abscisic acid responsive 27-kDa protein description:EFA27 for EF hand, abscisic acid, 27kD. (Os04t0511200-01)
Sequence

GCAATTTTGCAAAGCGAGAATTCCACACAGGTTACACCAGTATATACGCATCTTGCTAAA
CCGACTACTGATCGAGATCGCTATGGCGGAGGAGGCGGCTAGCAAGGCAGCGCCGACCGA
TGCGCTGTCGTCCGTGGCGGCGGAGGCGCCGGTGACGAGAGAACGGCCGGTCCGAGCGGA
CTTGGAAGTGCAGATTCCGAAGCCCTATTTGGCCCGAGCTCTGGTTGCTCCGGACGTGTA
CCATCCTGAAGGAACCGAGGGGCGTGACCACCGGCAGATGAGTGTGCTGCAGCAGCATGT
GGCTTTCTTCGACCTGGATGGCGACGGTATCGTTTATCCATGGGAAACTTATGGAGGACT
ACGGGAATTGGGCTTCAACGTGATTGTTTCGTTCTTTTTGGCGATAGCCATAAACGTTGG
TCTAAGCTACCCAACTCTGCCAAGCTGGATACCATCTCTCCTGTTCCCTATACACATAAA
AAACATCCACAGGGCTAAGCACGGCAGCGATAGCTCGACGTACGACAACGAGGGAAGGTT
TATGCCGGTCAATTTCGAGAGCATCTTCAGCAAGAACGCCCGCACGGCGCCGGACAAGCT
CACGTTCGGCGATATCTGGCGGATGACCGAAGGCCAAAGGGTGGCGCTCGACTTGCTTGG
GAGGATCGCGAGTAAGGGGGAGTGGATATTGCTCTACGTGCTTGCGAAAGATGAGGAAGG
ATTCCTCAGGAAGGAGGCTGTTCGCCGCTGCTTCGATGGGAGCCTATTCGAGTCGATTGC
CCAGCAGAGAAGGGAGGCACATGAGAAGCAGAAGTAGCCTCCTAATTTCATCGTCCCGGG
ACCTGGGATGTGCTTGATTGCTTGTGTGTGTTGTTGTGTGGACTATAGCTATAGCCACAT
CATGTTTGTCCATCTGAAAAAACAATGGAAATAAGGTTTACCGGTTGGAACATACATTAT
GTACTATCCATGTGATTATTGAAATGTGTCTGTAACCTGAAAGTGTGATTGACATATAAA
ATTCTGTGATTGAAG