Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0510400-01
CDS Infomation	cds chromosome:IRGSP-1.0:4:25535365:25541426:-1 gene:Os04g0510400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RNA helicase 13 description:Similar to RNA helicase (Fragment). (Os04t0510400-01);Similar to DEAD-box ATP-dependent RNA helicase 13. (Os04t0510400-02)
Sequence	ATGGCCGCAGCGCCGCCGCCGCCACCGCCTCCGCAGCTGCAGTCCTCGGATCCCTCCACT CCGCCTCAGGAGACCAGCCAGGTACGCAAGGGAAAGAAGAGTCGTGGCGCGAAGAAACCT AGGAGAGCCGCCGCTGCCGCCGCCGCCTCGACCTCCTCGGCCGGCACGATGGTCGAGGAC CCCTTCCTCGTACTCGCCGGAGGCAAGGAAGGAGGGTTCCTGGAGCTTGAGGAGATCGAC GAGGCGGACTTCGGAATCTTTGGCGGTGCCGTGGAGGATCTAGGAGAAATTGACAGGAAG GCAGGAAAGGATCAGAAGAAGAAGAAGAGGAAGAAGCGGAAGCGAGGTGACGATGACTAT GCTTTACCTGGTGATGGTGATTTGGTAGTTGAATGTGAGGAGGAGGGAGAGAAGGGTGAG AAGAGGGTGAAAAAGAAGAGGAGGAGCAGGAAGAAGAGAAAGGTGAAGGAAATGGAGGAA AAAATGGAGAGCAAGGAAGATGTCTCCGATGACAATGTGGAAGATATGCAAGATGGCAAT GACATGGAACAAGATAACAATGATGGGCTGATTTTGGGAGAGGATGAAGTCTATGCATGG CGAGAGCTTAGACTGCACCCTCTTCTTATTACAGCGGTGCGCAGGCTTGGATTCAAAGAA CCAACACCAATACAAAAGGCTTGCTTTCCTGCAGCGGCTCATCAAGGCAAGGATGTTATT GGTGCAGCAGAGACAGGTTCTGGTAAAACACTTGCTTTTGGCCTCCCTATCTTGCAGCGC CTTCTTGAAGAACAAGAGAAGGCCATGAGATTGTCTCGGGAGGATGAGAGTACACAAGAT GAAAATTCTAGAGAAAGTCCACTTCGTGCTCTTATTTTAACACCCACCAGGGAGCTTGCC AAGCAGGTCTGCGATCATCTAAAAGAAGCAGCCAAGTTCTTAAGAATCCAAGTTGTTCCC ATTGTTGGTGGTCTATCCATGGAAAAGCAAGAACGGCTTCTGAAAAGGAAACCTGAGATT GTTGTTGGAACCCCAGGAAGATTGTGGGAGCTTATGTCAACAGGCAACCAACACCTAATT AAGTTACATTCATTATCATTCTTCGTGTTGGACGAGGCTGATAGAATGATAGAGCGAGGC CATTTCCATGAACTGCAATCTATCATTGAGATGTTACCAGTGACTAACGGTTCTGATGAA CAAACTGTTGGGACCACGCCAAGTTGCGAAACTGTGCCTATATTGCAAATAAAGAAGAGA CAGACATTTGTATTCTCAGCAACACTTGCTCTCTCAGCTAATTTTCGGAAAAAGTTGAAG CGAGGCCTAGTTACTGCAAAAGCGTCTGCATCTACTGATTTGAGTTCTATTGAAGCACTT TCGAAGCAGGCCCGTATGAAACCTAACGCAGAAATAGTTGATCTGACGAAGGCTTCTATC TTACCTGAGAAACTTGAAGAGTCTTTTATTGAGTGTAGTGATGATGATAAGGATGCCTAC CTGTATTATATATTGAGTGTCCATGGACAAGGCCGCACAATAATATTTTGTACATCAATA GCTGCATTACGTCACCTTTCATCTATATTACGAGTTCTTGGAATTAATGTCCTGACAAAT CATGCTCAAATGCAACAAAGGGCTCGCATGAAGGCTGTGGATCGTTTCCGTGAAAGTGAA AATTCAATTTTGGTTGCAACTGATGGTTTTGCAAGGGGCATGGATTTTGATGATGTCCGA ACTGTGATTCATTATCAATTGCCACACTCAACTGATGTTTACATCCACAGAAGTGGAAGG ACAGCGCGGAAATCAATGGCAGGTTGCAGCATTGCATTAATCTCTCCTGCAGACAAGGCC AAGTTTTACTCACTTTGCAAGTCACTGTCAAAGGAGAACCTCCAGCAGTTTCCTGTTGAC CATGCTTACATGCCTGCAGTAATGAATAGGCTCACCCTTGCTCGGCAGATTGACAAGATT ACACGTAAAAATTCCCAGGAAAATGCCAACAAATCATGGCTTCAGAGGAATGCTGAGTCC ATGGGATTATTATTGGAGACAAGTGACAGTGAGGAGGAACGTGTACAGGGGCATAAGCAA AGGAAAGCAACTTCTGCGAACCTCCAGAAGCTTCAACAGGATTTGAGTGAGCTCTTGCAA CGCCCCTTGCAGCCTAAGACTTTTTCGCGGCGCTATTTAGCTGGGGCTGGTGTTTCACCG TTACTTCAAAAGCAACTGGAAGAGTTGTCCAAAAGGAATGTTAAGGGCAGTGCTAGTGTA AATGCAAATAAAGGATCCCGATTTGTTGTTATTGGTCAGGATCAAATAGAACCCTTGCAA GCTCTTCAGAATTCTGGGCAAGAGGTGTGTGTGAGCATTGACAAGCAAAGAGAAAAGCGA AGGCTTGCTGAAAATTGGAGGCGAAAGAAGCAAAAAGAGAAGAAAAGTACACGAGAGCAA AAGAGAAAGGAGAAGAGGATAGCTAAAGAAAGGGACTAA

Peptide Sequence

PEP ID	Os04t0510400-01
PEP Infomation	pep chromosome:IRGSP-1.0:4:25535365:25541426:-1 gene:Os04g0510400 transcript:Os04t0510400-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RNA helicase 13 description:Similar to RNA helicase (Fragment). (Os04t0510400-01);Similar to DEAD-box ATP-dependent RNA helicase 13. (Os04t0510400-02)
Sequence	MAAAPPPPPPPQLQSSDPSTPPQETSQVRKGKKSRGAKKPRRAAAAAAASTSSAGTMVED PFLVLAGGKEGGFLELEEIDEADFGIFGGAVEDLGEIDRKAGKDQKKKKRKKRKRGDDDY ALPGDGDLVVECEEEGEKGEKRVKKKRRSRKKRKVKEMEEKMESKEDVSDDNVEDMQDGN DMEQDNNDGLILGEDEVYAWRELRLHPLLITAVRRLGFKEPTPIQKACFPAAAHQGKDVI GAAETGSGKTLAFGLPILQRLLEEQEKAMRLSREDESTQDENSRESPLRALILTPTRELA KQVCDHLKEAAKFLRIQVVPIVGGLSMEKQERLLKRKPEIVVGTPGRLWELMSTGNQHLI KLHSLSFFVLDEADRMIERGHFHELQSIIEMLPVTNGSDEQTVGTTPSCETVPILQIKKR QTFVFSATLALSANFRKKLKRGLVTAKASASTDLSSIEALSKQARMKPNAEIVDLTKASI LPEKLEESFIECSDDDKDAYLYYILSVHGQGRTIIFCTSIAALRHLSSILRVLGINVLTN HAQMQQRARMKAVDRFRESENSILVATDGFARGMDFDDVRTVIHYQLPHSTDVYIHRSGR TARKSMAGCSIALISPADKAKFYSLCKSLSKENLQQFPVDHAYMPAVMNRLTLARQIDKI TRKNSQENANKSWLQRNAESMGLLLETSDSEEERVQGHKQRKATSANLQKLQQDLSELLQ RPLQPKTFSRRYLAGAGVSPLLQKQLEELSKRNVKGSASVNANKGSRFVVIGQDQIEPLQ ALQNSGQEVCVSIDKQREKRRLAENWRRKKQKEKKSTREQKRKEKRIAKERD

Transcript Sequence

Transcript ID	Os04t0510400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:25535365:25541426:-1 gene:Os04g0510400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RNA helicase 13 description:Similar to RNA helicase (Fragment). (Os04t0510400-01);Similar to DEAD-box ATP-dependent RNA helicase 13. (Os04t0510400-02)
Sequence	GCTGCCGCCCACACCGCCACCGCCTCCCCCCAACCCGCCGCTTCCGTCTCCGATGGCCGC AGCGCCGCCGCCGCCACCGCCTCCGCAGCTGCAGTCCTCGGATCCCTCCACTCCGCCTCA GGAGACCAGCCAGGTACGCAAGGGAAAGAAGAGTCGTGGCGCGAAGAAACCTAGGAGAGC CGCCGCTGCCGCCGCCGCCTCGACCTCCTCGGCCGGCACGATGGTCGAGGACCCCTTCCT CGTACTCGCCGGAGGCAAGGAAGGAGGGTTCCTGGAGCTTGAGGAGATCGACGAGGCGGA CTTCGGAATCTTTGGCGGTGCCGTGGAGGATCTAGGAGAAATTGACAGGAAGGCAGGAAA GGATCAGAAGAAGAAGAAGAGGAAGAAGCGGAAGCGAGGTGACGATGACTATGCTTTACC TGGTGATGGTGATTTGGTAGTTGAATGTGAGGAGGAGGGAGAGAAGGGTGAGAAGAGGGT GAAAAAGAAGAGGAGGAGCAGGAAGAAGAGAAAGGTGAAGGAAATGGAGGAAAAAATGGA GAGCAAGGAAGATGTCTCCGATGACAATGTGGAAGATATGCAAGATGGCAATGACATGGA ACAAGATAACAATGATGGGCTGATTTTGGGAGAGGATGAAGTCTATGCATGGCGAGAGCT TAGACTGCACCCTCTTCTTATTACAGCGGTGCGCAGGCTTGGATTCAAAGAACCAACACC AATACAAAAGGCTTGCTTTCCTGCAGCGGCTCATCAAGGCAAGGATGTTATTGGTGCAGC AGAGACAGGTTCTGGTAAAACACTTGCTTTTGGCCTCCCTATCTTGCAGCGCCTTCTTGA AGAACAAGAGAAGGCCATGAGATTGTCTCGGGAGGATGAGAGTACACAAGATGAAAATTC TAGAGAAAGTCCACTTCGTGCTCTTATTTTAACACCCACCAGGGAGCTTGCCAAGCAGGT CTGCGATCATCTAAAAGAAGCAGCCAAGTTCTTAAGAATCCAAGTTGTTCCCATTGTTGG TGGTCTATCCATGGAAAAGCAAGAACGGCTTCTGAAAAGGAAACCTGAGATTGTTGTTGG AACCCCAGGAAGATTGTGGGAGCTTATGTCAACAGGCAACCAACACCTAATTAAGTTACA TTCATTATCATTCTTCGTGTTGGACGAGGCTGATAGAATGATAGAGCGAGGCCATTTCCA TGAACTGCAATCTATCATTGAGATGTTACCAGTGACTAACGGTTCTGATGAACAAACTGT TGGGACCACGCCAAGTTGCGAAACTGTGCCTATATTGCAAATAAAGAAGAGACAGACATT TGTATTCTCAGCAACACTTGCTCTCTCAGCTAATTTTCGGAAAAAGTTGAAGCGAGGCCT AGTTACTGCAAAAGCGTCTGCATCTACTGATTTGAGTTCTATTGAAGCACTTTCGAAGCA GGCCCGTATGAAACCTAACGCAGAAATAGTTGATCTGACGAAGGCTTCTATCTTACCTGA GAAACTTGAAGAGTCTTTTATTGAGTGTAGTGATGATGATAAGGATGCCTACCTGTATTA TATATTGAGTGTCCATGGACAAGGCCGCACAATAATATTTTGTACATCAATAGCTGCATT ACGTCACCTTTCATCTATATTACGAGTTCTTGGAATTAATGTCCTGACAAATCATGCTCA AATGCAACAAAGGGCTCGCATGAAGGCTGTGGATCGTTTCCGTGAAAGTGAAAATTCAAT TTTGGTTGCAACTGATGGTTTTGCAAGGGGCATGGATTTTGATGATGTCCGAACTGTGAT TCATTATCAATTGCCACACTCAACTGATGTTTACATCCACAGAAGTGGAAGGACAGCGCG GAAATCAATGGCAGGTTGCAGCATTGCATTAATCTCTCCTGCAGACAAGGCCAAGTTTTA CTCACTTTGCAAGTCACTGTCAAAGGAGAACCTCCAGCAGTTTCCTGTTGACCATGCTTA CATGCCTGCAGTAATGAATAGGCTCACCCTTGCTCGGCAGATTGACAAGATTACACGTAA AAATTCCCAGGAAAATGCCAACAAATCATGGCTTCAGAGGAATGCTGAGTCCATGGGATT ATTATTGGAGACAAGTGACAGTGAGGAGGAACGTGTACAGGGGCATAAGCAAAGGAAAGC AACTTCTGCGAACCTCCAGAAGCTTCAACAGGATTTGAGTGAGCTCTTGCAACGCCCCTT GCAGCCTAAGACTTTTTCGCGGCGCTATTTAGCTGGGGCTGGTGTTTCACCGTTACTTCA AAAGCAACTGGAAGAGTTGTCCAAAAGGAATGTTAAGGGCAGTGCTAGTGTAAATGCAAA TAAAGGATCCCGATTTGTTGTTATTGGTCAGGATCAAATAGAACCCTTGCAAGCTCTTCA GAATTCTGGGCAAGAGGTGTGTGTGAGCATTGACAAGCAAAGAGAAAAGCGAAGGCTTGC TGAAAATTGGAGGCGAAAGAAGCAAAAAGAGAAGAAAAGTACACGAGAGCAAAAGAGAAA GGAGAAGAGGATAGCTAAAGAAAGGGACTAAATGACAACGTTGTCCAACTACTCATCATT GTAGGCACTACATTGTTACTGTTGGGAAACAAGTTTTGGGGGTGTTGGATATCATTTTTG CAATTGAAGATAGGGTTATAATCAACTGTACCAGCATCATATCTGAGCATCAACTGTGGC ATGCATG