Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0508900-00
CDS Infomation	cds chromosome:IRGSP-1.0:4:25435284:25439059:-1 gene:Os04g0508900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to OSIGBa0101P20.13 protein. (Os04t0508900-00)
Sequence	ATGGGTTTTCAGTTTTTTTTTCAAGTGCAAGCAAGTAAGGCCTCAACCGTCAAGCATGGG AAAGCTAGAAAAGTTAAGGAAAACCCACTCAAAAGCCCAGGAACCCCAAAACCTGGCCCA TCTCCCCGGTCCCCGACCTCGCCTCTCCTTCCTCCTCTGCTCCCACTCCGCCTCGCCGCC GCCTCCACCATGTACGGCGTCGGCGGCGGCGGCGGGGGGTTCAACGCGCCCTACACGGCA TCGGCCCGGCGGCGCAACCACGAGGACGACGACGACGAGGAGGAGGAGGAGTCCGGCGAG GGGCGCGTCCTCGAGGCCTGGGAGCGCGCGTACGCGGACGACCGGTCATGGGAGGCGCTG CAGGAGGACGAGTCGGGCCTCCTCCGCCCGATCGACACCAAGACCCTCGTCCACGCGCAG TACCGCCGCCGCCTTCTCCTCCGCTCTGCCGCCTCCGCCGCCGCCCGCATCCAGAAGGGC CTCATCCGCTACCTCTACATCGTCATCGATCTCTCCCGGGCAGCTTCAGAGATGGATTAT CGACCTAGTCGAATGGCTGTTGTTGCAAAATATGCTGAGGTATTCATAAGGGAATTTTTT GACCAGAATCCCTTGAGTCATGTGGGGATAGTGACAATGAAAGATGGGATTTCCCATCGA CTTACAGAGATTGGAGGTAGTCCTGAATCACAGATTAAAGCATTGATGGGGAAGCTTGAG TGTTCTGGTGAACCATCTCTGCAGAATGCTCTAGAGCTTGTCCATGGTTATTTAGACCAG GTTCCTTCATATGGTCACAAGGAAGTATTATTTTTGTACTCGGCCCTGAATACCTGTGAT CCTGGAGATATCATGGAGACAATAGCAAAATGCAAGAAATCCAAAATACGATGTTCGGTT ATTGGGCTTGCTGCAGAGATTTTTATCTGCAAATATCTGTGTGAAGAGACTGGCGGATCC TACACAGTTGCACTGGATGAGTCCCATTTCAAGGAATTGCTTCTGGAACATGCTCCTCCA CCACCTGCAATTGCTGAGTATGCTGCAGCTAATTTGATTAAGATGGGTTTTCCGCAGAGA GGAGCAGAGGATCTTATCTCCATCTGCTCTTGTCACAAGAAAATAAAGTCGGGGGCTGAA GGTTACATATGTCCTAGATGCAAAGTCAATGTATGTGAGCTTCCAACAGAATGTCGAACT TGCGGGCTGACACTAGTTAGCTCTCCACATCTGGCAAGGTCCTATCATCATCTCTTCCCT GTACAACCATTTGATGAGGTGTCCTCCGTGCACCCAAATAGACTAGGTCAAAAGGGAGGA CAAAAGTGTTACGGCTGCCAGCAAAGCTTTATTAACCCTGATAGTCAATCTAGCCTCCAT GTTCGCTGTCCAAAATGCAACCAACACTTCTGCCTTGATTGCGATATTTACATCCATGAG AGCTTGCACAATTGCCCAGGTTGCGAGAGTCAGCGTAGTTCTTCATAG

Peptide Sequence

PEP ID	Os04t0508900-00
PEP Infomation	pep chromosome:IRGSP-1.0:4:25435284:25439059:-1 gene:Os04g0508900 transcript:Os04t0508900-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to OSIGBa0101P20.13 protein. (Os04t0508900-00)
Sequence	MGFQFFFQVQASKASTVKHGKARKVKENPLKSPGTPKPGPSPRSPTSPLLPPLLPLRLAA ASTMYGVGGGGGGFNAPYTASARRRNHEDDDDEEEEESGEGRVLEAWERAYADDRSWEAL QEDESGLLRPIDTKTLVHAQYRRRLLLRSAASAAARIQKGLIRYLYIVIDLSRAASEMDY RPSRMAVVAKYAEVFIREFFDQNPLSHVGIVTMKDGISHRLTEIGGSPESQIKALMGKLE CSGEPSLQNALELVHGYLDQVPSYGHKEVLFLYSALNTCDPGDIMETIAKCKKSKIRCSV IGLAAEIFICKYLCEETGGSYTVALDESHFKELLLEHAPPPPAIAEYAAANLIKMGFPQR GAEDLISICSCHKKIKSGAEGYICPRCKVNVCELPTECRTCGLTLVSSPHLARSYHHLFP VQPFDEVSSVHPNRLGQKGGQKCYGCQQSFINPDSQSSLHVRCPKCNQHFCLDCDIYIHE SLHNCPGCESQRSSS

Transcript Sequence

Transcript ID	Os04t0508900-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:25435284:25439059:-1 gene:Os04g0508900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to OSIGBa0101P20.13 protein. (Os04t0508900-00)
Sequence	ATGGGTTTTCAGTTTTTTTTTCAAGTGCAAGCAAGTAAGGCCTCAACCGTCAAGCATGGG AAAGCTAGAAAAGTTAAGGAAAACCCACTCAAAAGCCCAGGAACCCCAAAACCTGGCCCA TCTCCCCGGTCCCCGACCTCGCCTCTCCTTCCTCCTCTGCTCCCACTCCGCCTCGCCGCC GCCTCCACCATGTACGGCGTCGGCGGCGGCGGCGGGGGGTTCAACGCGCCCTACACGGCA TCGGCCCGGCGGCGCAACCACGAGGACGACGACGACGAGGAGGAGGAGGAGTCCGGCGAG GGGCGCGTCCTCGAGGCCTGGGAGCGCGCGTACGCGGACGACCGGTCATGGGAGGCGCTG CAGGAGGACGAGTCGGGCCTCCTCCGCCCGATCGACACCAAGACCCTCGTCCACGCGCAG TACCGCCGCCGCCTTCTCCTCCGCTCTGCCGCCTCCGCCGCCGCCCGCATCCAGAAGGGC CTCATCCGCTACCTCTACATCGTCATCGATCTCTCCCGGGCAGCTTCAGAGATGGATTAT CGACCTAGTCGAATGGCTGTTGTTGCAAAATATGCTGAGGTATTCATAAGGGAATTTTTT GACCAGAATCCCTTGAGTCATGTGGGGATAGTGACAATGAAAGATGGGATTTCCCATCGA CTTACAGAGATTGGAGGTAGTCCTGAATCACAGATTAAAGCATTGATGGGGAAGCTTGAG TGTTCTGGTGAACCATCTCTGCAGAATGCTCTAGAGCTTGTCCATGGTTATTTAGACCAG GTTCCTTCATATGGTCACAAGGAAGTATTATTTTTGTACTCGGCCCTGAATACCTGTGAT CCTGGAGATATCATGGAGACAATAGCAAAATGCAAGAAATCCAAAATACGATGTTCGGTT ATTGGGCTTGCTGCAGAGATTTTTATCTGCAAATATCTGTGTGAAGAGACTGGCGGATCC TACACAGTTGCACTGGATGAGTCCCATTTCAAGGAATTGCTTCTGGAACATGCTCCTCCA CCACCTGCAATTGCTGAGTATGCTGCAGCTAATTTGATTAAGATGGGTTTTCCGCAGAGA GGAGCAGAGGATCTTATCTCCATCTGCTCTTGTCACAAGAAAATAAAGTCGGGGGCTGAA GGTTACATATGTCCTAGATGCAAAGTCAATGTATGTGAGCTTCCAACAGAATGTCGAACT TGCGGGCTGACACTAGTTAGCTCTCCACATCTGGCAAGGTCCTATCATCATCTCTTCCCT GTACAACCATTTGATGAGGTGTCCTCCGTGCACCCAAATAGACTAGGTCAAAAGGGAGGA CAAAAGTGTTACGGCTGCCAGCAAAGCTTTATTAACCCTGATAGTCAATCTAGCCTCCAT GTTCGCTGTCCAAAATGCAACCAACACTTCTGCCTTGATTGCGATATTTACATCCATGAG AGCTTGCACAATTGCCCAGGTTGCGAGAGTCAGCGTAGTTCTTCATAGGGATGCCATTGT GGTGTTAATCTTTGTCTTTTTAACTCAAGAAGCTACCCGTTGCTGTAAGCTTTCTCGTAC ACTGACATTGGTAGGCGATGTTGTGAGGTAATCAAACAGTGTACAGATGATATAGTGCCC GGCCTCCATTTTGTTGACGCTTCCTGTTCATTTAGATGGAGTAGCTAGTTAAGCTATTTT GATACAGAGTACTGGTCAAAGAGTTGTTGAAGCCATAGCATTGTTGCTGAGGGGAGGTGT TAGAAATGTACAATGCGACTGAAAAGTGAAAACTTGTAACTCTTGCCGTTTTTCTGAGGC AAAGATGTATTCTTTCAGTGTCATAGTCATGCCCTGACATGCCA