Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os04t0508500-01
CDS Infomation

cds chromosome:IRGSP-1.0:4:25405125:25407689:-1 gene:Os04g0508500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:R2R3-MYB description:Similar to OSIGBa0101P20.9 protein. (Os04t0508500-01)
Sequence

ATGGCGGCGGCGGAAGTGCAGTCGGCTGCCGGGTGGGGGAGGCAGCTGCAGCAGGACGGC
GGCGGGTGGAGGAAAGGGCCGTGGACGAGCCAGGAGGACGCGCTGCTCGTCGAGCATGTC
AGGCAGCACGGCGAAGGCCGGTGGAATTCTGTCTCCAAGCTTACAGGTCTGAAGAGAAGC
GGCAAGAGCTGCAGGCTACGATGGGTTAACTACCTGAGGCCTGATCTGAAGAGAGGCAAG
ATCACTCCCCAGGAGGAGAGCATCATCGTCCAGCTCCATGCCTTGTGGGGCAACAGGTGG
TCGACGATCGCGCGTAGCCTCCCGGGCAGGACGGACAACGAGATCAAGAACTACTGGAGG
ACGCACTTCAAGAAGGGCAAGCCGTCCAAGAACATCGAGCGCGCCAGGGCCAGGTTCCTG
AAGCAGCGCCGCGAGATGCAGCAGAGCCAGCAGCTGCAGCAGCCGACGCTAATGCCGACG
CCGACGCCGCAGAGCAAGGACATCATCGTTGCCGAGACCGGTGACGCGCGCACCGACGAC
GACGCGGGCGGCGCCGCAGCGGCTGTGGCGCCGTCGTCGTCGTCGTCGTCTTTGTCGATG
GGGGGCGGGGAGGCGGAGGACTTGATCATGCACCAGGACGCGATGGACGACCTCATGATG
TGCCCCGCCATGTCCTACCACCTCATCCTCCACGGCGCCGCCGTCGCCGGCCATCAGCTG
AGCGACGGCGGCGGCAGCTGCTGCGCCTCTACCAGCGAGGACTACGGCTCCAGCGAGGAC
GACGGCGCCACCTGGGGCAGCCTGTGGAACCTCGACGGCGCCGCCGGAGCATGCACGCTG
TGGTAG

Peptide Sequence

PEP ID

Os04t0508500-01
PEP Infomation

pep chromosome:IRGSP-1.0:4:25405125:25407689:-1 gene:Os04g0508500 transcript:Os04t0508500-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:R2R3-MYB description:Similar to OSIGBa0101P20.9 protein. (Os04t0508500-01)
Sequence

MAAAEVQSAAGWGRQLQQDGGGWRKGPWTSQEDALLVEHVRQHGEGRWNSVSKLTGLKRS
GKSCRLRWVNYLRPDLKRGKITPQEESIIVQLHALWGNRWSTIARSLPGRTDNEIKNYWR
THFKKGKPSKNIERARARFLKQRREMQQSQQLQQPTLMPTPTPQSKDIIVAETGDARTDD
DAGGAAAAVAPSSSSSSLSMGGGEAEDLIMHQDAMDDLMMCPAMSYHLILHGAAVAGHQL
SDGGGSCCASTSEDYGSSEDDGATWGSLWNLDGAAGACTLW

Transcript Sequence

Transcript ID

Os04t0508500-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:4:25405125:25407689:-1 gene:Os04g0508500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:R2R3-MYB description:Similar to OSIGBa0101P20.9 protein. (Os04t0508500-01)
Sequence

TCGCGGCCATAGATAGCTATAGCTGCTATCTTAATCTAGCTCGCCTTTAATTTGGCCCCC
GGCCTCTCTCTCTCTGCCTGTGTCCTACCAGCTGCACAAAAATCTCCCAGAAAACAGGCA
GAGGGGAGAGAGACAGATACGCATCAATTAAGCTCATTTTCTTCGATCTGCTGGTGAAAG
AAGAACTGAAGAAGAGAGGTAGCTGGACTGAAGAGGCCGGCAATGGCGGCGGCGGAAGTG
CAGTCGGCTGCCGGGTGGGGGAGGCAGCTGCAGCAGGACGGCGGCGGGTGGAGGAAAGGG
CCGTGGACGAGCCAGGAGGACGCGCTGCTCGTCGAGCATGTCAGGCAGCACGGCGAAGGC
CGGTGGAATTCTGTCTCCAAGCTTACAGGTCTGAAGAGAAGCGGCAAGAGCTGCAGGCTA
CGATGGGTTAACTACCTGAGGCCTGATCTGAAGAGAGGCAAGATCACTCCCCAGGAGGAG
AGCATCATCGTCCAGCTCCATGCCTTGTGGGGCAACAGGTGGTCGACGATCGCGCGTAGC
CTCCCGGGCAGGACGGACAACGAGATCAAGAACTACTGGAGGACGCACTTCAAGAAGGGC
AAGCCGTCCAAGAACATCGAGCGCGCCAGGGCCAGGTTCCTGAAGCAGCGCCGCGAGATG
CAGCAGAGCCAGCAGCTGCAGCAGCCGACGCTAATGCCGACGCCGACGCCGCAGAGCAAG
GACATCATCGTTGCCGAGACCGGTGACGCGCGCACCGACGACGACGCGGGCGGCGCCGCA
GCGGCTGTGGCGCCGTCGTCGTCGTCGTCGTCTTTGTCGATGGGGGGCGGGGAGGCGGAG
GACTTGATCATGCACCAGGACGCGATGGACGACCTCATGATGTGCCCCGCCATGTCCTAC
CACCTCATCCTCCACGGCGCCGCCGTCGCCGGCCATCAGCTGAGCGACGGCGGCGGCAGC
TGCTGCGCCTCTACCAGCGAGGACTACGGCTCCAGCGAGGACGACGGCGCCACCTGGGGC
AGCCTGTGGAACCTCGACGGCGCCGCCGGAGCATGCACGCTGTGGTAGATCAATTTCCCG
GTCTGCATGACGCCATGAGAGAAGAGTAGTCGCGATCTCGAGTACGTGCATACAGACGAC
ATAGCTGCGGCGTGCTCGTGGGATAAAGATGGGACAGCAAACTTATCATCCGTGGATCGA
TCGTACGTCCACTTCCACAAACGACGGCCTGAGTCGATGACACGTTAAAGCCATAGTACT
ATTATTGGTCACACTTCTTTAATCAGGGGAGATTAACTAATGTGTTCTTTTCCCCTTGTT
GCTAGCTAGCTAGAGCTATAGTATAACAAAGGAGAGAGAGAGATTTATATGC