Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0508000-01
CDS Infomation	cds chromosome:IRGSP-1.0:4:25381717:25384946:-1 gene:Os04g0508000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:trichome birefringence-like 30 description:Protein of unknown function DUF231, plant domain containing protein. (Os04t0508000-01)
Sequence	ATGGCCGGCGCGTGGAGGAAGGCGTGGCTGTCGATGCTGGACCGAGGCGGCGGATCAGGC GCGGGCGGCGGAGGCGGCGGGAGCAGCGGGTCGCTGCACGTGCACCTCCACGGCCTCCTC TCCCCGTCCTCGTCGTCGTCGTCGCTCAACGGTTACAAGCGCGGCGGCGGTAAGCACGGC GGCGGTGGTGGTTGCGGCGGCGGCCATGTGATGACGAGTAGCAAGGCCGTGCTGGCATGC TTCTCCGTCGCGCTCGTGGTGGCCTTCTTCTACGTCTCCGTCGCCAGCGGCCCCACCGCG GACGCCGCCTCGTTCCCTTCCCCGACGGGGGCGTCGTCGTCGTCACTCCTGTCGTGGCTG TCGTCGAACTCGACGTCGGCGGCGGCGCTGCCGAGGAGGTCTCTCCCGCCTCACCCGCCC ATTCCTCCTGCCGGCGGCGGCGCTGATCTGCGTAACACCGCGCGTAGAACGCAGAGCGGC GCCGAGGGCTCGGGGTTGCCGGCGCCGGCGGCGGAGCAAACGGCCAAACCGCGGGTTTCT GATCTCCGGTCGGGCGCCGGGAACGCCACCGTCGGTGACGTCGACGGGGATCAACGCGTC GGGAATGGCACGCGATCACGACAGCAGCGAGAGGAAACCGCAACACCAATGCCGCGATGG CAGAGAAGGGACGAGGAGAAGAACTCCACCCACCACGCCATCGTCGCCGCTCCCGGCAAC TCCACCGACGCCCCGGCCCCACCACTGAACTCGACGGCGACGCCGCGAGCCGCAGCAGCA GCCGCAGCCACGCCATCGACGCCGCCGGAGAGGAAGGCTGACACCCACCACAGCCATCGG AGAGGCATCAGGCACAAGCAGCAGCAGCATCACCAGCACCCGAGGCGGCGAAAGGACACC GTCCTCCTCGCGGCGGCGGCGGCGCGCCAAGAAGCTCCCGATCGCCGCGACGACGGCGCC GCCATGCCATTGCCCGCCGCGACGATCATCAACACCAGCACCGTCGGCGACAACCGCGTC GTCTGGACGTCCGGCGTGCAGAGTGGCCTGGTCTCCTTCGCCAAGTGCGACGTGTTCAGT GGCCGCTGGGTGCGCGATGACGACGAGGGCGGCGGCGCCTACCCGTTCTACCCGCCGGGC TCGTGCCCCCACATCGACGACGACTTCAACTGCCACAAGAACGGCCGCGCCGACACCGGC TTCCTCAGGTGGAGGTGGCAGCCGCACGGCTGCGACATCCCCAGGCTGAACCCGATTGAT TTTCTGGAGAGGCTGAGAGGGCAGAGGATCATATTCGTCGGCGACTCACTGAACCGCAAC ATGTGGGAGTCTCTGGTGTGCATTCTGCGGCATGGTGTCAGGGACAAGAGGAGGATGTAT GAAGCGTCAGGGAGGAACCAGTTCAAGACCAGGGGATACTACTCCTTCAGATTCAGGGAT TACAATTGCTCCGTGGATTTCATAAGATCAATATTTCTAGTCAAGGAGATGATCAACGAG ACCAAAGGCGGCGCCGTGGTGGACGCTAAGTTGAGATTGGATGAACTCGATGAAACGACT CCGGCGTACCGGACTGCCGACATCGTCGTCTTCAACACCGGCCACTGGTGGACGCACTGG AAAACATCAAGAGGGCTGAATTACTACCAAGAAGGTAACTACGTGCACCCCAGCCTCGAG GTGATGGACGCATACAAGAGAGCTCTGACCACCTGGGCTAGATGGGTCGACAAGAACATC GACTCCACAAGAACTCAGGTGGTGTTCAGAGGATACTCCCTCACACATTTCAGGGGAGGG CAGTGGAACTCAGGAGGGAGATGCCACAGGGAGACGGAGCCGATCTTCAACCGGACGCAC CTCGCCGAGTACCCGGAGAAGATGAGGATCCTGGAGCAGGTGCTGGGGCGGATGAGGACG CCGGTGATCTACCTCAACATCAGCGCCATGACGGACTACCGCAAGGACGCCCACCCGTCG GTGTACCGGGTGCGGTACGAGACGGAGGAGGAGCGGATGGCGGCGGTGGCGAAGCAGGAC TGCAGCCACTGGTGCCTGCCCGGCGTGCCGGATTCCTGGAACGAGCTGCTGTACGCCTCG CTGCTCCAGGCAGGGAGAGGATCGTGGAGACTATGA

Peptide Sequence

PEP ID	Os04t0508000-01
PEP Infomation	pep chromosome:IRGSP-1.0:4:25381717:25384946:-1 gene:Os04g0508000 transcript:Os04t0508000-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:trichome birefringence-like 30 description:Protein of unknown function DUF231, plant domain containing protein. (Os04t0508000-01)
Sequence	MAGAWRKAWLSMLDRGGGSGAGGGGGGSSGSLHVHLHGLLSPSSSSSSLNGYKRGGGKHG GGGGCGGGHVMTSSKAVLACFSVALVVAFFYVSVASGPTADAASFPSPTGASSSSLLSWL SSNSTSAAALPRRSLPPHPPIPPAGGGADLRNTARRTQSGAEGSGLPAPAAEQTAKPRVS DLRSGAGNATVGDVDGDQRVGNGTRSRQQREETATPMPRWQRRDEEKNSTHHAIVAAPGN STDAPAPPLNSTATPRAAAAAAATPSTPPERKADTHHSHRRGIRHKQQQHHQHPRRRKDT VLLAAAAARQEAPDRRDDGAAMPLPAATIINTSTVGDNRVVWTSGVQSGLVSFAKCDVFS GRWVRDDDEGGGAYPFYPPGSCPHIDDDFNCHKNGRADTGFLRWRWQPHGCDIPRLNPID FLERLRGQRIIFVGDSLNRNMWESLVCILRHGVRDKRRMYEASGRNQFKTRGYYSFRFRD YNCSVDFIRSIFLVKEMINETKGGAVVDAKLRLDELDETTPAYRTADIVVFNTGHWWTHW KTSRGLNYYQEGNYVHPSLEVMDAYKRALTTWARWVDKNIDSTRTQVVFRGYSLTHFRGG QWNSGGRCHRETEPIFNRTHLAEYPEKMRILEQVLGRMRTPVIYLNISAMTDYRKDAHPS VYRVRYETEEERMAAVAKQDCSHWCLPGVPDSWNELLYASLLQAGRGSWRL

Transcript Sequence

Transcript ID	Os04t0508000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:25381717:25384946:-1 gene:Os04g0508000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:trichome birefringence-like 30 description:Protein of unknown function DUF231, plant domain containing protein. (Os04t0508000-01)
Sequence	GCTCGCTTCACTCCCCAGCAAGTTGCGGCGGCGGCGCGCGGCTAGCCGGACACACCGATC ACGCTGACTAGCTAGTACTAGTAGCTATTGAATGGCCGGCGCGTGGAGGAAGGCGTGGCT GTCGATGCTGGACCGAGGCGGCGGATCAGGCGCGGGCGGCGGAGGCGGCGGGAGCAGCGG GTCGCTGCACGTGCACCTCCACGGCCTCCTCTCCCCGTCCTCGTCGTCGTCGTCGCTCAA CGGTTACAAGCGCGGCGGCGGTAAGCACGGCGGCGGTGGTGGTTGCGGCGGCGGCCATGT GATGACGAGTAGCAAGGCCGTGCTGGCATGCTTCTCCGTCGCGCTCGTGGTGGCCTTCTT CTACGTCTCCGTCGCCAGCGGCCCCACCGCGGACGCCGCCTCGTTCCCTTCCCCGACGGG GGCGTCGTCGTCGTCACTCCTGTCGTGGCTGTCGTCGAACTCGACGTCGGCGGCGGCGCT GCCGAGGAGGTCTCTCCCGCCTCACCCGCCCATTCCTCCTGCCGGCGGCGGCGCTGATCT GCGTAACACCGCGCGTAGAACGCAGAGCGGCGCCGAGGGCTCGGGGTTGCCGGCGCCGGC GGCGGAGCAAACGGCCAAACCGCGGGTTTCTGATCTCCGGTCGGGCGCCGGGAACGCCAC CGTCGGTGACGTCGACGGGGATCAACGCGTCGGGAATGGCACGCGATCACGACAGCAGCG AGAGGAAACCGCAACACCAATGCCGCGATGGCAGAGAAGGGACGAGGAGAAGAACTCCAC CCACCACGCCATCGTCGCCGCTCCCGGCAACTCCACCGACGCCCCGGCCCCACCACTGAA CTCGACGGCGACGCCGCGAGCCGCAGCAGCAGCCGCAGCCACGCCATCGACGCCGCCGGA GAGGAAGGCTGACACCCACCACAGCCATCGGAGAGGCATCAGGCACAAGCAGCAGCAGCA TCACCAGCACCCGAGGCGGCGAAAGGACACCGTCCTCCTCGCGGCGGCGGCGGCGCGCCA AGAAGCTCCCGATCGCCGCGACGACGGCGCCGCCATGCCATTGCCCGCCGCGACGATCAT CAACACCAGCACCGTCGGCGACAACCGCGTCGTCTGGACGTCCGGCGTGCAGAGTGGCCT GGTCTCCTTCGCCAAGTGCGACGTGTTCAGTGGCCGCTGGGTGCGCGATGACGACGAGGG CGGCGGCGCCTACCCGTTCTACCCGCCGGGCTCGTGCCCCCACATCGACGACGACTTCAA CTGCCACAAGAACGGCCGCGCCGACACCGGCTTCCTCAGGTGGAGGTGGCAGCCGCACGG CTGCGACATCCCCAGGCTGAACCCGATTGATTTTCTGGAGAGGCTGAGAGGGCAGAGGAT CATATTCGTCGGCGACTCACTGAACCGCAACATGTGGGAGTCTCTGGTGTGCATTCTGCG GCATGGTGTCAGGGACAAGAGGAGGATGTATGAAGCGTCAGGGAGGAACCAGTTCAAGAC CAGGGGATACTACTCCTTCAGATTCAGGGATTACAATTGCTCCGTGGATTTCATAAGATC AATATTTCTAGTCAAGGAGATGATCAACGAGACCAAAGGCGGCGCCGTGGTGGACGCTAA GTTGAGATTGGATGAACTCGATGAAACGACTCCGGCGTACCGGACTGCCGACATCGTCGT CTTCAACACCGGCCACTGGTGGACGCACTGGAAAACATCAAGAGGGCTGAATTACTACCA AGAAGGTAACTACGTGCACCCCAGCCTCGAGGTGATGGACGCATACAAGAGAGCTCTGAC CACCTGGGCTAGATGGGTCGACAAGAACATCGACTCCACAAGAACTCAGGTGGTGTTCAG AGGATACTCCCTCACACATTTCAGGGGAGGGCAGTGGAACTCAGGAGGGAGATGCCACAG GGAGACGGAGCCGATCTTCAACCGGACGCACCTCGCCGAGTACCCGGAGAAGATGAGGAT CCTGGAGCAGGTGCTGGGGCGGATGAGGACGCCGGTGATCTACCTCAACATCAGCGCCAT GACGGACTACCGCAAGGACGCCCACCCGTCGGTGTACCGGGTGCGGTACGAGACGGAGGA GGAGCGGATGGCGGCGGTGGCGAAGCAGGACTGCAGCCACTGGTGCCTGCCCGGCGTGCC GGATTCCTGGAACGAGCTGCTGTACGCCTCGCTGCTCCAGGCAGGGAGAGGATCGTGGAG ACTATGAGAAGTTGATTTCTCAAAATCTCTTGACAGTTGACACACAAGGCACAGGCGAAA AAAAAAAGATGAGTGGTAACATGGTTCATGTTAGAGGTGCACATAAACACAGGAAAATCC TGCAGTGAGTAGATCAGGTAGAAGCAGATTAATCGTTAATAAGATGATGAGGTTTTAATT CTTTCCTCCCGGTAGTTCATGTACATATGAGAGCTTAATAACTGATGTACCATCTGAAGA ATATCATCACATATTCATATCGAAACC