Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os04t0507100-02
CDS Infomation

cds chromosome:IRGSP-1.0:4:25340375:25341971:-1 gene:Os04g0507100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os04t0507100-01);Similar to cDNA clone:J013060A10, full insert sequence. (Os04t0507100-02)
Sequence

ATGGCGCCGCCGCCGCCGTCGCCGCCGCGATCTCTCACCTCCGTCTCCCTCCGGACTCCT
CTGAGCCCTCTCCTCTTCCTACGGCCAGCTTCTTGCAATCCATCGGCGGTCTCCGGCTCC
TGCAGCAGCGGAGCATGCCGCGGCGTGCGCTGCTCGGCGGCGAACAAGCCTTCTCCTTCC
ACCGCTCCGGGCACCGAGGTAAGCTCGACCTCCATGGCAAAGATAAGGAGTGAGGTGCTG
TCCCCGTTCCGCTCCGTGCGGATGTTCTTCTACCTCGCGTTCATGGCCAGCGCCGGGCTC
GGGGCCCTCATCGCGCTCACGCAGCTCATCCCGGCGCTGTCCAGCCCGGCGAGGGCGGCC
GCCGCGGGGGAGACGCTCAAGGGCCTGGGCATCGACGTCGCGGCGGTCTCCGTCTTCGCG
TTCCTCTACTGGCGCGAGAGCAAGGCCAAGGACGCGCAGGTGGCGAAGCTCACGCGGGAG
GAGAACCTGTCCAGGCTCAGGATCCGCGCCGGCGAGGGCCGCCCGCCCGTCCCGCTCGGC
GAGCTGAGGGGCACCGCGCGGCTCGTCATCGTCGCCGGCCCCGCGGCGTTCGTCACCGAG
TCGTTCCGCCGGAGCAAGCCGTTCTTGAAGGACCTCATGGAGCGCGGCGTGCTTGTCGTG
CCCTTCTCGACGGACGGCAACGCGCCGGACCTGCAGTTCGACGAGGCCGACGAGGAGGAG
GAGGAGGCGGCGGCGGCGGCTGGGAAGATGAAGCGGAGGCTCTGGCAGCTCACTCCGGTT
TACACTTCTGAATGGGCCAAATGGCTAGATGAGCAGAAGAAGCTAGCCAACGTGTCACCT
GATTCCCCCGTGTATCTCTCGCTCCGGCTGGACGGCCGCGTCCGTGGCAGCGGCGTCGGG
TACCCGCCGTGGCAAGCGTTCGTGGCGCAGCTGCCGCCGGTGAAGGGGATGTGGTCCGGC
CTCCTTGATGGGATGGACGGGAGGGTGCTTTGA

Peptide Sequence

PEP ID

Os04t0507100-02
PEP Infomation

pep chromosome:IRGSP-1.0:4:25340375:25341971:-1 gene:Os04g0507100 transcript:Os04t0507100-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os04t0507100-01);Similar to cDNA clone:J013060A10, full insert sequence. (Os04t0507100-02)
Sequence

MAPPPPSPPRSLTSVSLRTPLSPLLFLRPASCNPSAVSGSCSSGACRGVRCSAANKPSPS
TAPGTEVSSTSMAKIRSEVLSPFRSVRMFFYLAFMASAGLGALIALTQLIPALSSPARAA
AAGETLKGLGIDVAAVSVFAFLYWRESKAKDAQVAKLTREENLSRLRIRAGEGRPPVPLG
ELRGTARLVIVAGPAAFVTESFRRSKPFLKDLMERGVLVVPFSTDGNAPDLQFDEADEEE
EEAAAAAGKMKRRLWQLTPVYTSEWAKWLDEQKKLANVSPDSPVYLSLRLDGRVRGSGVG
YPPWQAFVAQLPPVKGMWSGLLDGMDGRVL

Transcript Sequence

Transcript ID

Os04t0507100-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:4:25340375:25341971:-1 gene:Os04g0507100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os04t0507100-01);Similar to cDNA clone:J013060A10, full insert sequence. (Os04t0507100-02)
Sequence

AGTGGTGGTCTGCACTCTGCAGGCAGGCAGGCACCCAGGCCTGCAGCTCGATGGCGCCGC
CGCCGCCGTCGCCGCCGCGATCTCTCACCTCCGTCTCCCTCCGGACTCCTCTGAGCCCTC
TCCTCTTCCTACGGCCAGCTTCTTGCAATCCATCGGCGGTCTCCGGCTCCTGCAGCAGCG
GAGCATGCCGCGGCGTGCGCTGCTCGGCGGCGAACAAGCCTTCTCCTTCCACCGCTCCGG
GCACCGAGGTAAGCTCGACCTCCATGGCAAAGATAAGGAGTGAGGTGCTGTCCCCGTTCC
GCTCCGTGCGGATGTTCTTCTACCTCGCGTTCATGGCCAGCGCCGGGCTCGGGGCCCTCA
TCGCGCTCACGCAGCTCATCCCGGCGCTGTCCAGCCCGGCGAGGGCGGCCGCCGCGGGGG
AGACGCTCAAGGGCCTGGGCATCGACGTCGCGGCGGTCTCCGTCTTCGCGTTCCTCTACT
GGCGCGAGAGCAAGGCCAAGGACGCGCAGGTGGCGAAGCTCACGCGGGAGGAGAACCTGT
CCAGGCTCAGGATCCGCGCCGGCGAGGGCCGCCCGCCCGTCCCGCTCGGCGAGCTGAGGG
GCACCGCGCGGCTCGTCATCGTCGCCGGCCCCGCGGCGTTCGTCACCGAGTCGTTCCGCC
GGAGCAAGCCGTTCTTGAAGGACCTCATGGAGCGCGGCGTGCTTGTCGTGCCCTTCTCGA
CGGACGGCAACGCGCCGGACCTGCAGTTCGACGAGGCCGACGAGGAGGAGGAGGAGGCGG
CGGCGGCGGCTGGGAAGATGAAGCGGAGGCTCTGGCAGCTCACTCCGGTTTACACTTCTG
AATGGGCCAAATGGCTAGATGAGCAGAAGAAGCTAGCCAACGTGTCACCTGATTCCCCCG
TGTATCTCTCGCTCCGGCTGGACGGCCGCGTCCGTGGCAGCGGCGTCGGGTACCCGCCGT
GGCAAGCGTTCGTGGCGCAGCTGCCGCCGGTGAAGGGGATGTGGTCCGGCCTCCTTGATG
GGATGGACGGGAGGGTGCTTTGAATATTTGACTGATACAGACCGTGAAAACATTAGTTGA
TTGGAGAAAAAAAAGGACGGCCGGGTTCGATCTATAGCTTATACTAGAACAAGAACAGGA
AGAGTTTGATGATTGCTTTAACTTCTGTGGGGTTGATTTTGCTTCCTGCATCCCAGCGAC
ATCGCCCAAGTGAATGTGATATGCCATGTGCCCATGTACATGTTGTTTTGCAGCCTACGT
GACTTGATTATTAACGAG