Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0507000-01
CDS Infomation	cds chromosome:IRGSP-1.0:4:25323826:25340028:-1 gene:Os04g0507000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to DNA mismatch repair protein. (Os04t0507000-01)
Sequence	ATGGCCATTCAGCGGCTGCTCGCGAGCTCGCTCGTGGCCGCCACGCCGCGGTGGCTTCCC GTCGCCGCCGACTCGTTTCTCCGGCGCCGCCACCGCCCTCGCTGCTCCCCGCTCCCCGCG CTGCTATTTAACAGGAGGTCCTGGTCTAAACCAAGGAAAGTCTCACGAAGCATTTCCATT GTGTCTAGGAAGATGAACAAACAAGGAGATCTCTGTAATGAAGGCATGCTGCCACATATT CTGTGGTGGAAAGAGAAAATGGAGAGGTGCAGGAAACCATCATCAATGCAATTGACTCAG AGACTTGTGTATTCAAATATTTTAGGATTGGATCCAACTTTAAGAAATGGAAGCTTGAAG GATGGAAGCCTGAACACGGAAATGTTGCAATTCAAATCGAAGTTTCCTCGTGAAGTTCTA CTTTGCAGAGTGGGAGATTTCTACGAGGCTGTTGGGTTTGATGCATGTATCCTTGTGGAG CATGCAGGCTTAAATCCTTTTGGAGGCTTGCGTTCTGATAGTATTCCAAAAGCTGGATGT CCAGTCATGAATTTGCGGCAGACATTGGATGATTTGACTCGATGTGGTTACTCTGTGTGC ATAGTTGAAGAAATTCAAGGCCCAACCCAAGCTCGTGCTAGGAAAGGCCGATTTATTTCT GGCCATGCACATCCTGGTAGTCCTTATGTATTTGGTCTTGCTGAAGTAGACCATGATGTT GAGTTCCCTGATCCAATGCCTGTAGTTGGGATTTCACGATCTGCAAAAGGCTATTGCCTG ATTTCTGTGCTAGAGACAATGAAAACATATTCAGCTGAGGAGGGCTTAACAGAGGAAGCA GTTGTTACTAAGCTTCGCATATGCCGTTATCATCATCTATACCTTCATAGTTCTTTGAGG AACAATTCTTCAGGCACATCACGCTGGGGAGAATTTGGCGAAGGTGGGCTATTGTGGGGA GAGTGCAGTGGAAAATCTTTTGAGTGGTTTGATGGTAATCCTATTGAAGAACTGTTATGC AAGGTAAGGGAAATATATGGGCTTGAAGAGAAGACTGTTTTCCGTAATGTCAGTGTCTCA TTGGAAGGGAGGCCTCAACCCTTGTATCTTGGAACAGCTACTCAAATTGGGGTGATACCA ACTGAGGGAATACCCAGTTTGCTAAAAATTGTTCTCCCTCCAAACTTTGGTGGCCTTCCA TCATTGTATATTAGAGATCTTCTTCTTAACCCTCCATCTTTTGATGTTGCATCATCAGTT CAAGAGGCTTGCAGGCTTATGGGTAGCATAACTTGCTCGATTCCTGAATTTACATGCATA CCGGCAGCAAAGCTTGTGAAATTACTCGAGTCAAAAGAGGTTAATCACATCGAATTTTGT AGAATAAAGAATGTCCTCGATGAGGTGTTGTTCATGGGTAGCAATGCTGAGCTTTCTGCT ATCCTGAATAAATTGCTTGATCCTGCCGCCATAGTTACTGGGTTCAAAGTTGAAGCCGAT ATACTAGTGAATGAATGTAGCTTTATTTCACAACGTATAGCTGAAGTAATCTCTTTAGGT GGTGAAAGTGACCAGGCAATAACTTCATCTGAATATATTCCGAAAGAGTTCTTCAATGAT ATGGAGTCATCTTGGAAGGGACGTGTAAAAAGGGTGCATGCTGAAGAGGAGTTCTCAAAT GTTGATATAGCTGCTGAGGCACTGTCAACAGCGGTCATTGAAGATTTTCTGCCAATTATT TCAAGAGTAAAATCTGTGATGTCCTCAAATGGAAGTTCGAAGGGAGAAATCAGTTATGCA AAAGAGCATGAATCTGTTTGGTTTAAAGGGAGGCGATTCACACCAAATGTGTGGGCCAAC ACTCCTGGTGAACTACAGATAAAGCAATTGAAGCCTGCAATTGACTCAAAAGGTAGAAAG GTCGGAGAAGAATGGTTCACCACTATCAAAGTTGAGAATGCTTTAACCAGGTACCATGAA GCTTGTGATAATGCAAAACGTAAAGTTCTTGAGTTGTTGAGAGGACTTTCAAGTGAATTG CAGGACAAGATTAATGTCCTTGTCTTTTGCTCAACGATGCTCATCATAACAAAAGCACTT TTTGGTCATGTTAGTGAAGGACGAAGAAGGGGTTGGGTGCTTCCTACTATATCTCCCTTG TGTAAGGATAATGTTACAGAGGAAATCTCAAGTGAAATGGAATTGTCAGGAACTTTTCCT TACTGGCTTGATACTAACCAAGGGAATGCAATACTGAATGATGTCCATATGCACTCTTTG TTTATTCTTACTGGTCCAAACGGTGGTGGTAAATCCAGTATGCTGAGATCAGTCTGTGCT GCTGCATTACTTGGAATATGTGGCCTGATGGTGCCAGCTGCTTCAGCTGTCATCCCACAT TTCGATTCCATCATGCTGCATATGAAAGCATATGATAGCCCAGCTGATGGTAAAAGTTCG TTTCAGATTGAAATGTCAGAGATACGATCTTTAGTCTGCCGAGCTACAGCTAGGAGTCTT GTTCTAATTGATGAAATATGTAGGGGCACAGAAACAGCAAAAGGAACATGTATAGCTGGT AGCATCATTGAAAGACTCGATAATGTTGGCTGCATAGGCATCATATCAACTCATTTGCAT GGCATTTTTGACCTTCCACTGTCACTCCACAATACTGATTTCAAAGCTATGGGAACCGAA ATCATCGATAGGTGCATTCAGCCAACATGGAAATTAATGGATGGCATCTGTAGAGAGAGT CTTGCTTTTCAAACAGCCAGGAAAGAAGGTATGCCTGACTTGATAATTAGAAGAGCTGAG GAACTATATTTGGCTATGAGCACAAACAGCAAGCAGACATCATCAGCTGTCCACCATGAA ATATCCATAGCCAACTCTACTGTAAATAGCTTGGTTGAGAAGCCTAATTACCTGAGAAAT GGACTAGAGCTTCAATCTGGTTCCTTCGGATTACTAAGAAAAGAAATTGAGAGTGTTGTT ACCACAATATGCAAGAAGAAACTGTTGGATCTCTACAACAAAAGGAGCATCTCAGAACTG ATTGAGGTGGTCTGTGTTGCTGTGGGTGCTAGGGAGCAACCCCCACCTTCAACTGTTGGC AGGTCCAGCATTTATGTAATTATCAGACGTGACAGCAAGCTCTATATTGGACAGACGGAT GATCTTGTGGGTCGACTTAGTGCTCACAGATCGAAGGAAGGTATGCAGGATGCCACGATA TTATATATTTTGGTACCTGGGAAGAGCATTGCATGCCAACTGGAAACTCTTCTCATAAAT CAGCTACCTTTGAAAGGTTTCAAGCTCATCAACAAGGCAGATGGCAAGCATCGAAATTTC GGTATATCTCTTGTCCCAGGAGAGGCAATTGCCGCATAG

Peptide Sequence

PEP ID	Os04t0507000-01
PEP Infomation	pep chromosome:IRGSP-1.0:4:25323826:25340028:-1 gene:Os04g0507000 transcript:Os04t0507000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to DNA mismatch repair protein. (Os04t0507000-01)
Sequence	MAIQRLLASSLVAATPRWLPVAADSFLRRRHRPRCSPLPALLFNRRSWSKPRKVSRSISI VSRKMNKQGDLCNEGMLPHILWWKEKMERCRKPSSMQLTQRLVYSNILGLDPTLRNGSLK DGSLNTEMLQFKSKFPREVLLCRVGDFYEAVGFDACILVEHAGLNPFGGLRSDSIPKAGC PVMNLRQTLDDLTRCGYSVCIVEEIQGPTQARARKGRFISGHAHPGSPYVFGLAEVDHDV EFPDPMPVVGISRSAKGYCLISVLETMKTYSAEEGLTEEAVVTKLRICRYHHLYLHSSLR NNSSGTSRWGEFGEGGLLWGECSGKSFEWFDGNPIEELLCKVREIYGLEEKTVFRNVSVS LEGRPQPLYLGTATQIGVIPTEGIPSLLKIVLPPNFGGLPSLYIRDLLLNPPSFDVASSV QEACRLMGSITCSIPEFTCIPAAKLVKLLESKEVNHIEFCRIKNVLDEVLFMGSNAELSA ILNKLLDPAAIVTGFKVEADILVNECSFISQRIAEVISLGGESDQAITSSEYIPKEFFND MESSWKGRVKRVHAEEEFSNVDIAAEALSTAVIEDFLPIISRVKSVMSSNGSSKGEISYA KEHESVWFKGRRFTPNVWANTPGELQIKQLKPAIDSKGRKVGEEWFTTIKVENALTRYHE ACDNAKRKVLELLRGLSSELQDKINVLVFCSTMLIITKALFGHVSEGRRRGWVLPTISPL CKDNVTEEISSEMELSGTFPYWLDTNQGNAILNDVHMHSLFILTGPNGGGKSSMLRSVCA AALLGICGLMVPAASAVIPHFDSIMLHMKAYDSPADGKSSFQIEMSEIRSLVCRATARSL VLIDEICRGTETAKGTCIAGSIIERLDNVGCIGIISTHLHGIFDLPLSLHNTDFKAMGTE IIDRCIQPTWKLMDGICRESLAFQTARKEGMPDLIIRRAEELYLAMSTNSKQTSSAVHHE ISIANSTVNSLVEKPNYLRNGLELQSGSFGLLRKEIESVVTTICKKKLLDLYNKRSISEL IEVVCVAVGAREQPPPSTVGRSSIYVIIRRDSKLYIGQTDDLVGRLSAHRSKEGMQDATI LYILVPGKSIACQLETLLINQLPLKGFKLINKADGKHRNFGISLVPGEAIAA

Transcript Sequence

Transcript ID	Os04t0507000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:25323826:25340028:-1 gene:Os04g0507000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to DNA mismatch repair protein. (Os04t0507000-01)
Sequence	CCCTGACACTTCCCAAAACCCCAAACCGCCCATATCTCTCTCCTCTTCTCCGCTCCTCGC TTCCCCCAAAACCCTCGCGGTGGCGGTGGGCCGCCGGTCTCATTCCGCCGGCGTCCACGG AGGCGGCCGGAGCCAGGCGCTCCGCGGGCCGGGGAGCCACCGGAAGGCTGGAACCCTAGC GGCGGCGGGTCTCCTCCCCCTCCCCGCGCGCCGGGCGGCGCCATGGCCATTCAGCGGCTG CTCGCGAGCTCGCTCGTGGCCGCCACGCCGCGGTGGCTTCCCGTCGCCGCCGACTCGTTT CTCCGGCGCCGCCACCGCCCTCGCTGCTCCCCGCTCCCCGCGCTGCTATTTAACAGGAGG TCCTGGTCTAAACCAAGGAAAGTCTCACGAAGCATTTCCATTGTGTCTAGGAAGATGAAC AAACAAGGAGATCTCTGTAATGAAGGCATGCTGCCACATATTCTGTGGTGGAAAGAGAAA ATGGAGAGGTGCAGGAAACCATCATCAATGCAATTGACTCAGAGACTTGTGTATTCAAAT ATTTTAGGATTGGATCCAACTTTAAGAAATGGAAGCTTGAAGGATGGAAGCCTGAACACG GAAATGTTGCAATTCAAATCGAAGTTTCCTCGTGAAGTTCTACTTTGCAGAGTGGGAGAT TTCTACGAGGCTGTTGGGTTTGATGCATGTATCCTTGTGGAGCATGCAGGCTTAAATCCT TTTGGAGGCTTGCGTTCTGATAGTATTCCAAAAGCTGGATGTCCAGTCATGAATTTGCGG CAGACATTGGATGATTTGACTCGATGTGGTTACTCTGTGTGCATAGTTGAAGAAATTCAA GGCCCAACCCAAGCTCGTGCTAGGAAAGGCCGATTTATTTCTGGCCATGCACATCCTGGT AGTCCTTATGTATTTGGTCTTGCTGAAGTAGACCATGATGTTGAGTTCCCTGATCCAATG CCTGTAGTTGGGATTTCACGATCTGCAAAAGGCTATTGCCTGATTTCTGTGCTAGAGACA ATGAAAACATATTCAGCTGAGGAGGGCTTAACAGAGGAAGCAGTTGTTACTAAGCTTCGC ATATGCCGTTATCATCATCTATACCTTCATAGTTCTTTGAGGAACAATTCTTCAGGCACA TCACGCTGGGGAGAATTTGGCGAAGGTGGGCTATTGTGGGGAGAGTGCAGTGGAAAATCT TTTGAGTGGTTTGATGGTAATCCTATTGAAGAACTGTTATGCAAGGTAAGGGAAATATAT GGGCTTGAAGAGAAGACTGTTTTCCGTAATGTCAGTGTCTCATTGGAAGGGAGGCCTCAA CCCTTGTATCTTGGAACAGCTACTCAAATTGGGGTGATACCAACTGAGGGAATACCCAGT TTGCTAAAAATTGTTCTCCCTCCAAACTTTGGTGGCCTTCCATCATTGTATATTAGAGAT CTTCTTCTTAACCCTCCATCTTTTGATGTTGCATCATCAGTTCAAGAGGCTTGCAGGCTT ATGGGTAGCATAACTTGCTCGATTCCTGAATTTACATGCATACCGGCAGCAAAGCTTGTG AAATTACTCGAGTCAAAAGAGGTTAATCACATCGAATTTTGTAGAATAAAGAATGTCCTC GATGAGGTGTTGTTCATGGGTAGCAATGCTGAGCTTTCTGCTATCCTGAATAAATTGCTT GATCCTGCCGCCATAGTTACTGGGTTCAAAGTTGAAGCCGATATACTAGTGAATGAATGT AGCTTTATTTCACAACGTATAGCTGAAGTAATCTCTTTAGGTGGTGAAAGTGACCAGGCA ATAACTTCATCTGAATATATTCCGAAAGAGTTCTTCAATGATATGGAGTCATCTTGGAAG GGACGTGTAAAAAGGGTGCATGCTGAAGAGGAGTTCTCAAATGTTGATATAGCTGCTGAG GCACTGTCAACAGCGGTCATTGAAGATTTTCTGCCAATTATTTCAAGAGTAAAATCTGTG ATGTCCTCAAATGGAAGTTCGAAGGGAGAAATCAGTTATGCAAAAGAGCATGAATCTGTT TGGTTTAAAGGGAGGCGATTCACACCAAATGTGTGGGCCAACACTCCTGGTGAACTACAG ATAAAGCAATTGAAGCCTGCAATTGACTCAAAAGGTAGAAAGGTCGGAGAAGAATGGTTC ACCACTATCAAAGTTGAGAATGCTTTAACCAGGTACCATGAAGCTTGTGATAATGCAAAA CGTAAAGTTCTTGAGTTGTTGAGAGGACTTTCAAGTGAATTGCAGGACAAGATTAATGTC CTTGTCTTTTGCTCAACGATGCTCATCATAACAAAAGCACTTTTTGGTCATGTTAGTGAA GGACGAAGAAGGGGTTGGGTGCTTCCTACTATATCTCCCTTGTGTAAGGATAATGTTACA GAGGAAATCTCAAGTGAAATGGAATTGTCAGGAACTTTTCCTTACTGGCTTGATACTAAC CAAGGGAATGCAATACTGAATGATGTCCATATGCACTCTTTGTTTATTCTTACTGGTCCA AACGGTGGTGGTAAATCCAGTATGCTGAGATCAGTCTGTGCTGCTGCATTACTTGGAATA TGTGGCCTGATGGTGCCAGCTGCTTCAGCTGTCATCCCACATTTCGATTCCATCATGCTG CATATGAAAGCATATGATAGCCCAGCTGATGGTAAAAGTTCGTTTCAGATTGAAATGTCA GAGATACGATCTTTAGTCTGCCGAGCTACAGCTAGGAGTCTTGTTCTAATTGATGAAATA TGTAGGGGCACAGAAACAGCAAAAGGAACATGTATAGCTGGTAGCATCATTGAAAGACTC GATAATGTTGGCTGCATAGGCATCATATCAACTCATTTGCATGGCATTTTTGACCTTCCA CTGTCACTCCACAATACTGATTTCAAAGCTATGGGAACCGAAATCATCGATAGGTGCATT CAGCCAACATGGAAATTAATGGATGGCATCTGTAGAGAGAGTCTTGCTTTTCAAACAGCC AGGAAAGAAGGTATGCCTGACTTGATAATTAGAAGAGCTGAGGAACTATATTTGGCTATG AGCACAAACAGCAAGCAGACATCATCAGCTGTCCACCATGAAATATCCATAGCCAACTCT ACTGTAAATAGCTTGGTTGAGAAGCCTAATTACCTGAGAAATGGACTAGAGCTTCAATCT GGTTCCTTCGGATTACTAAGAAAAGAAATTGAGAGTGTTGTTACCACAATATGCAAGAAG AAACTGTTGGATCTCTACAACAAAAGGAGCATCTCAGAACTGATTGAGGTGGTCTGTGTT GCTGTGGGTGCTAGGGAGCAACCCCCACCTTCAACTGTTGGCAGGTCCAGCATTTATGTA ATTATCAGACGTGACAGCAAGCTCTATATTGGACAGACGGATGATCTTGTGGGTCGACTT AGTGCTCACAGATCGAAGGAAGGTATGCAGGATGCCACGATATTATATATTTTGGTACCT GGGAAGAGCATTGCATGCCAACTGGAAACTCTTCTCATAAATCAGCTACCTTTGAAAGGT TTCAAGCTCATCAACAAGGCAGATGGCAAGCATCGAAATTTCGGTATATCTCTTGTCCCA GGAGAGGCAATTGCCGCATAGAGCACACTGAGCATACCCACTGAAAATCTGATGTACTAC TAACTCTTTATAATATGCAATCTAATCGAACTCTAGGAGAGTAAATTCTGATCC