Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0506900-02
CDS Infomation	cds chromosome:IRGSP-1.0:4:25314361:25319944:-1 gene:Os04g0506900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to OSIGBa0157A06.2 protein. (Os04t0506900-01);Similar to OSIGBa0157A06.2 protein. (Os04t0506900-02)
Sequence	ATGACCAGCAAAAATGTGCTAACTGATAGAACTCACAGAGATGGCTCTCGAGTTCATAAA AGCCGGCAAGATGTCAATAGAACTGTTGATCCCAAAATAGGTTGTGTAGAGGACAAATTA CAGGTAGTAGCTAGTACTAGGAATTCTTCAAGCAACAAATCAACCATATCTCCAATGAAC AGATTAGTAGCAATGGAGATGTCCAAAGGAGTGGAATCAAAGAGGAAGCCACCTAGTGTC GTTGCCAGACTAATGGGGCTTGATGATGATCTACCTGCTAAAGAACCAGCATTACAATCT TCTAGAAGAAATTTGCGGAGAAGTCATTCACTTGATAATTTGGCAGCAACAAACAGGCCC CAACAACAGCAAGAGCAGCATTACAGCAGGACAACACCAAACATACACATAGGCCCCAAA GAGACAGTTGAATTTAAGGATGTGTACGAAGTCTCTGAAGATCCATTAAAGAGACATCAT ATTCTGGGGCAAAATTTTCCTTGGGAAAGATCTTCTGGGAACAAGAGTGACACTAGGATC GAAGCTGTTCGACAGAAGTTCATGGAAGCAAAACGCCTTGCCACAAATGAGAATCTCATC CATTCAAAGCAGTTTCAAGAAGCTCTTGAGGTTCTAAGTTCAAACAGGGAGTTGTTTCTG AAGTTTCTTGAAGAACCAAGCCCTGCTTTCTTGAAGCAGCTCGATGGACTTGACACAACG CCTGCACCGCCTCCGACGAAGCGTATTACAGTGTTGAAGCCAATCAAATCTGTTGAGAAC AATGGAATAAGAGAAACCAGAACACACCAAGTTATTAATGAAGAAAATGAACTTGTGATG GGAAAGACTCACCAGAGATCTTACTCAGCAGATGACAACTTCTCCAAGTCAACTAGGATA GTGGTCCTAAAGCCTAGCCCTGGGAAGCCTAATAGAACAGGAGCCAGGCTAACTGCCCGA GCAGCTCCATCTGAACAAACTCGGCGGATCGACTTCCATGGAGGTTTACAAGATGATGCA TCCATCCTAGGATCTAGGGAATTACTGCATGGTTCGGTTCAGCACATGCCAGAGAGTCGT CATCGGCGGGACGAATCCCTGATATCATCCACATATTCAAATGGGTATGGTGGAGATGAA AGCTCTTTCAGTGGGTCAGAAGTTGACTACATTGATGAAGGAGGTAGCCCAAGTGACTCA GATGCAGTCAGTCCAATGTCGCGACATTCATGGGATTACATCAGAAGACACAACAGTCCT CACTCAGCCTCTACTTTTAGCAGGGCCCATTCACATTCACCTGAGTCATCTGTGATCAGG GAAGCCAAAAAACGGCTTTCAGAGAGATGGGCAATGGTATCATACAATGAGATCAATCAA GAACAAGTACCTTTGCGAAGGAGCTCAACCACCTTGGGTGAGATGCTCTCCCTTCAAGTA GCTAAGAAAGAAGAAGCTGTTGCTGGGATAATTTCTGTTTCAAGCAACCGGTCAAGTGGC ACAGAAAATGAGTTGGCCATGAAAGATGCATGCAAATCTACTTTAAGAGAGTACGATGAA AATGGGAAGAGCTCTCCAAGGAATTTAGCAAAATCAAAATCTGTCCCAGTGTCTTCATCT ATATTTGACAACGTAGCAGTGAATGCTCAATCTGCAAATTCTGAAGGGACTCCGAAGGTG TTTACAAAGTCAGGTAGAGCAAAATTATCTTTCACGGGGAAAATATCAAGTTTTTTCTTC CCAGGCAATAAAAGGCCAACAAAAGAGAAAACTTCCCTCTCATCTGATAGCTCAGGCGAG ATATTTGGATGTATCGGGCACATGGTGCCGCAGTCTGATCACAATCTTGGTCCTGATGAA CAAATGGCTTTTTGCAAGGATGAAGCTGATAATTCCACCAATCATGCTCCCTGTTCTACA AAAGATGCTGGTTCCATAGAAGTACCTGTATCTTCTGACTGTGTAAGTGGAGATGTTGAT GAAGTAAAATCAAATGGTGATCTAAAATCTATCCACGATGAGACTAGTCCTACTTCAATT CTTGACACGGTTTTTGAAGATAGCAACAGTAATGAACCTGAATCTTCAAGAAGAACTTCC TGCACCGAGAGGGTTGCCTTACGATGCCCTGCTATCGATTCTGTTGCCCGCTCATTTTCA TGGGAAGATACCAACTCAGGTTCTCCGTTGCTAGGTGGCCTAAAGCATTCCAATGTAGAT GATGCCGATTATGATGATGATGAACTAAAATGTTACTCTCTTGTACAAGAGATAGTATCA TCTGCTGGATTATGCCATCTGCAGTTAAGTATGGTCTTCACAGGGTGGTACCTGCCTGAA TCCCCCCTTGATCCTGCATTGTGTGACAAGTTCTTGGATCGCAAGGAGGAGGATGCTAAA TCGAGGGAGCGAAGGTCACACCAAAAGCTCATTTTCGATTGTGTAAATATGGCCTTGGTT GAGATTGGCCAGGATACGTTACTATGCAGCTATCCATGGAGTAGAGCATGCTTAAGAACA TGGAGGGAGAAACTATCTGAAACCTTGGGTGAAGAAGTATGGAACATCGTGAGCGATTGG CTTTATGGAGATGGGAGCTTTGCGGCAAACAAGGACGACAATGCTGGAATAATCTTGGAA AGAATTATGCAGGAGGAGGTGGAAGGGAAGGGTTGGATTAAGCTATTGACAATGGAAACA GATGAGATCACTGAGCAGATTGCCAGTGAAGTGTTGGAGGACATTGTCACAGATTCTGTG GAGCATCTGTCAATTTGTTGTTCAGAGCATGGCATTTCAATGCCAGTAGCAAATCTGTAG

Peptide Sequence

PEP ID	Os04t0506900-02
PEP Infomation	pep chromosome:IRGSP-1.0:4:25314361:25319944:-1 gene:Os04g0506900 transcript:Os04t0506900-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to OSIGBa0157A06.2 protein. (Os04t0506900-01);Similar to OSIGBa0157A06.2 protein. (Os04t0506900-02)
Sequence	MTSKNVLTDRTHRDGSRVHKSRQDVNRTVDPKIGCVEDKLQVVASTRNSSSNKSTISPMN RLVAMEMSKGVESKRKPPSVVARLMGLDDDLPAKEPALQSSRRNLRRSHSLDNLAATNRP QQQQEQHYSRTTPNIHIGPKETVEFKDVYEVSEDPLKRHHILGQNFPWERSSGNKSDTRI EAVRQKFMEAKRLATNENLIHSKQFQEALEVLSSNRELFLKFLEEPSPAFLKQLDGLDTT PAPPPTKRITVLKPIKSVENNGIRETRTHQVINEENELVMGKTHQRSYSADDNFSKSTRI VVLKPSPGKPNRTGARLTARAAPSEQTRRIDFHGGLQDDASILGSRELLHGSVQHMPESR HRRDESLISSTYSNGYGGDESSFSGSEVDYIDEGGSPSDSDAVSPMSRHSWDYIRRHNSP HSASTFSRAHSHSPESSVIREAKKRLSERWAMVSYNEINQEQVPLRRSSTTLGEMLSLQV AKKEEAVAGIISVSSNRSSGTENELAMKDACKSTLREYDENGKSSPRNLAKSKSVPVSSS IFDNVAVNAQSANSEGTPKVFTKSGRAKLSFTGKISSFFFPGNKRPTKEKTSLSSDSSGE IFGCIGHMVPQSDHNLGPDEQMAFCKDEADNSTNHAPCSTKDAGSIEVPVSSDCVSGDVD EVKSNGDLKSIHDETSPTSILDTVFEDSNSNEPESSRRTSCTERVALRCPAIDSVARSFS WEDTNSGSPLLGGLKHSNVDDADYDDDELKCYSLVQEIVSSAGLCHLQLSMVFTGWYLPE SPLDPALCDKFLDRKEEDAKSRERRSHQKLIFDCVNMALVEIGQDTLLCSYPWSRACLRT WREKLSETLGEEVWNIVSDWLYGDGSFAANKDDNAGIILERIMQEEVEGKGWIKLLTMET DEITEQIASEVLEDIVTDSVEHLSICCSEHGISMPVANL

Transcript Sequence

Transcript ID	Os04t0506900-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:25314361:25319944:-1 gene:Os04g0506900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to OSIGBa0157A06.2 protein. (Os04t0506900-01);Similar to OSIGBa0157A06.2 protein. (Os04t0506900-02)
Sequence	GATGATGGCGTAAAGGCGGCGCCTTTTCTCTGCAGTTCCTCCCCTCCCGTCCCTTTCCGC TCCCGCGCCCGAGAATTTATTGCTCGCAATGCTGCCCTCTCTGATGATGAGCAGAGCAAA GGATGCAGAGCCTTTACACTTTAAATGCTTGGTCGGTTTGGCTGCAAGATGCCATATTGC CATCTCATGCGTACCACCGCCATCCGTCCGTCACTGAGCTCCTGCTTGCGTAGTGACGAG CGTTCTGGTTTCGCTCAGCTCGTCTCGATTTCACACGGATTGGAATTCGGCCGCATTCCG CGTGGAAAGCTTCGAGTTCTTGGTGCTTCTTGTTCTCCGCTGCGAAAACCGCAGCTTTAG ATTCATCAATGTTGTTATCCTCTGAGGCTTCCTTTGTAATAAGAAGGCAGTGATCAATTT GTTTGACCTGAGTACCGGGATGACCAGCAAAAATGTGCTAACTGATAGAACTCACAGAGA TGGCTCTCGAGTTCATAAAAGCCGGCAAGATGTCAATAGAACTGTTGATCCCAAAATAGG TTGTGTAGAGGACAAATTACAGGTAGTAGCTAGTACTAGGAATTCTTCAAGCAACAAATC AACCATATCTCCAATGAACAGATTAGTAGCAATGGAGATGTCCAAAGGAGTGGAATCAAA GAGGAAGCCACCTAGTGTCGTTGCCAGACTAATGGGGCTTGATGATGATCTACCTGCTAA AGAACCAGCATTACAATCTTCTAGAAGAAATTTGCGGAGAAGTCATTCACTTGATAATTT GGCAGCAACAAACAGGCCCCAACAACAGCAAGAGCAGCATTACAGCAGGACAACACCAAA CATACACATAGGCCCCAAAGAGACAGTTGAATTTAAGGATGTGTACGAAGTCTCTGAAGA TCCATTAAAGAGACATCATATTCTGGGGCAAAATTTTCCTTGGGAAAGATCTTCTGGGAA CAAGAGTGACACTAGGATCGAAGCTGTTCGACAGAAGTTCATGGAAGCAAAACGCCTTGC CACAAATGAGAATCTCATCCATTCAAAGCAGTTTCAAGAAGCTCTTGAGGTTCTAAGTTC AAACAGGGAGTTGTTTCTGAAGTTTCTTGAAGAACCAAGCCCTGCTTTCTTGAAGCAGCT CGATGGACTTGACACAACGCCTGCACCGCCTCCGACGAAGCGTATTACAGTGTTGAAGCC AATCAAATCTGTTGAGAACAATGGAATAAGAGAAACCAGAACACACCAAGTTATTAATGA AGAAAATGAACTTGTGATGGGAAAGACTCACCAGAGATCTTACTCAGCAGATGACAACTT CTCCAAGTCAACTAGGATAGTGGTCCTAAAGCCTAGCCCTGGGAAGCCTAATAGAACAGG AGCCAGGCTAACTGCCCGAGCAGCTCCATCTGAACAAACTCGGCGGATCGACTTCCATGG AGGTTTACAAGATGATGCATCCATCCTAGGATCTAGGGAATTACTGCATGGTTCGGTTCA GCACATGCCAGAGAGTCGTCATCGGCGGGACGAATCCCTGATATCATCCACATATTCAAA TGGGTATGGTGGAGATGAAAGCTCTTTCAGTGGGTCAGAAGTTGACTACATTGATGAAGG AGGTAGCCCAAGTGACTCAGATGCAGTCAGTCCAATGTCGCGACATTCATGGGATTACAT CAGAAGACACAACAGTCCTCACTCAGCCTCTACTTTTAGCAGGGCCCATTCACATTCACC TGAGTCATCTGTGATCAGGGAAGCCAAAAAACGGCTTTCAGAGAGATGGGCAATGGTATC ATACAATGAGATCAATCAAGAACAAGTACCTTTGCGAAGGAGCTCAACCACCTTGGGTGA GATGCTCTCCCTTCAAGTAGCTAAGAAAGAAGAAGCTGTTGCTGGGATAATTTCTGTTTC AAGCAACCGGTCAAGTGGCACAGAAAATGAGTTGGCCATGAAAGATGCATGCAAATCTAC TTTAAGAGAGTACGATGAAAATGGGAAGAGCTCTCCAAGGAATTTAGCAAAATCAAAATC TGTCCCAGTGTCTTCATCTATATTTGACAACGTAGCAGTGAATGCTCAATCTGCAAATTC TGAAGGGACTCCGAAGGTGTTTACAAAGTCAGGTAGAGCAAAATTATCTTTCACGGGGAA AATATCAAGTTTTTTCTTCCCAGGCAATAAAAGGCCAACAAAAGAGAAAACTTCCCTCTC ATCTGATAGCTCAGGCGAGATATTTGGATGTATCGGGCACATGGTGCCGCAGTCTGATCA CAATCTTGGTCCTGATGAACAAATGGCTTTTTGCAAGGATGAAGCTGATAATTCCACCAA TCATGCTCCCTGTTCTACAAAAGATGCTGGTTCCATAGAAGTACCTGTATCTTCTGACTG TGTAAGTGGAGATGTTGATGAAGTAAAATCAAATGGTGATCTAAAATCTATCCACGATGA GACTAGTCCTACTTCAATTCTTGACACGGTTTTTGAAGATAGCAACAGTAATGAACCTGA ATCTTCAAGAAGAACTTCCTGCACCGAGAGGGTTGCCTTACGATGCCCTGCTATCGATTC TGTTGCCCGCTCATTTTCATGGGAAGATACCAACTCAGGTTCTCCGTTGCTAGGTGGCCT AAAGCATTCCAATGTAGATGATGCCGATTATGATGATGATGAACTAAAATGTTACTCTCT TGTACAAGAGATAGTATCATCTGCTGGATTATGCCATCTGCAGTTAAGTATGGTCTTCAC AGGGTGGTACCTGCCTGAATCCCCCCTTGATCCTGCATTGTGTGACAAGTTCTTGGATCG CAAGGAGGAGGATGCTAAATCGAGGGAGCGAAGGTCACACCAAAAGCTCATTTTCGATTG TGTAAATATGGCCTTGGTTGAGATTGGCCAGGATACGTTACTATGCAGCTATCCATGGAG TAGAGCATGCTTAAGAACATGGAGGGAGAAACTATCTGAAACCTTGGGTGAAGAAGTATG GAACATCGTGAGCGATTGGCTTTATGGAGATGGGAGCTTTGCGGCAAACAAGGACGACAA TGCTGGAATAATCTTGGAAAGAATTATGCAGGAGGAGGTGGAAGGGAAGGGTTGGATTAA GCTATTGACAATGGAAACAGATGAGATCACTGAGCAGATTGCCAGTGAAGTGTTGGAGGA CATTGTCACAGATTCTGTGGAGCATCTGTCAATTTGTTGTTCAGAGCATGGCATTTCAAT GCCAGTAGCAAATCTGTAGGAAGCAATTTCTTTCATATGAGCACTTGCCTTGAATTTTGT TGTGCTGAAAGAATTCCTCAGCAGCTTCATAGATTGTATATAAGTCCATGTAGTTGCTTA CTCTTGCTTCTGCTTATACCTACAGCTCAGATTGGCCAAAATCGTGCAGTTCTTTACTCT GTAGATGTCCTACTGGTCAAATTGGGTTAGTCAGAAGTCTAACAATAGCATATGGTGTCA GTAGTATTGTAGCTTTTTGGGAAGCGAAATACTAACTTTTAGTGGCCGTGTGTGTTTGAC TTTGAGGTGCAGCAGAACACTGCTCCATATGACCATATGCTGCAAAGAGTATTATATAAT GCATTCCGGCGCCAGTTGGC