Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0505200-03
CDS Infomation	cds chromosome:IRGSP-1.0:4:25218005:25219670:1 gene:Os04g0505200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Protein binding protein. (Os04t0505200-01);Leucine-rich repeat, plant specific containing protein. (Os04t0505200-02);Similar to Protein binding protein. (Os04t0505200-03)
Sequence	ATGGCAGGCTCGTTGTCTGCCGCGCTGTGCCTCACTCTCTTCTGCTTGCTGGGGGCATGC ATTGCGCCCGGGGCGCGTGCTAACGGCCGGCACAGCCGGCGGGACCTCGACATCAACCTC GGCAACGGCAACGGCGGGGGCATCAGCATCGGCATAGGAGGAAGTGGTGGTGGTGGTGGT GGTGGCTCCAGTGGTGGCTCCAGCGGCGGCGGCGGCGATCTGCGGCCGTGCGACTTCGAG AACGAGCGGCTGTACAAGGCGTACAAGGTGATCCAGAAGTTCAGGAGGACGGTGACGTGC GACCCGCAGAACATCATCTCCTCCTGGAGCGGCGCCGACCTGTGCAGCACCTACAAGGGG TTCTTCTGCGAGCGGCCGCCCAACATCACCGACCGGACCATCGCCTCCGTCGACTTCAAC GGCTACAACCTGCAGGCGTCGTCGCTGAAGGAGTTCGTGGACGCCCTCCCGGACCTGGCG CTGTTCCACGCCAACAGCAACAACTTCGGCGGCGCCGTGCCGGACCTCAGCCGGCTGCAG TACTTCTACGAGCTCGACCTGAGCAACAACAAGCTGTCGCCCGCCACGTTCCCGACGGAC GTGCTCAAGCTGAAGAACGCCACCTTCGTCGACATCCGCTTCAACAGCTTCTACGGCGAG CTCCCCGGCGGCGTCTTCTGCTCGTTCCCGCAGGTGCAGGCCATCTTCGTCAACAACAAC CAGTTCTCCGGCAGCCTGCCCGACAACATCGGCGACTCGCCGGTGAACTACCTCTCCCTC GCCAACAACAACTTCACGGGGGAGATCCCCAAGTCGATCGCGCGCATGGCCAACACGCTC TTCGAGGTGCTGTTCCTCAACAACAAGCTCAGCGGCTGCCTCCCCTACGAGCTCGGCCTG CTCGCCAAGGCCACCGTCATCGACGCCGGCACCAACCAGCTCACCGGCCCGATCCCGGCG TCGTTCGCGTGCCTGCGCAAGGTGGAGCAGCTCAACCTGGCGGACAACCTCCTCTACGGC GAGGTGCCCAACGCGCTGTGCGAGCTCGCCTTCTCGTGGTCGGGCCGCCTCAGGAACCTC ACGCTCTCCAACAACTACTTCACGTCGCTCGGCTCCTGCTGCTGGGACCTGATCAAGGAG GGGAAGCTCAACGTCGACCGCAACTGCATCCCGTACGCGCCCAACCAGCGGTCGCACGAC GAGTGCGCCGCCTTCTTCCACCGGACCAAGACCTCCGCGTGCCCCTGCAACACCTACGTG CCGTGTGGCCACAACAAGCACTCCGCCGCCGGCGCCGGCAGCGAGCAGGACACGGCGGCG GCGGAGGAGGACAAGTACAGGACTTACTCGGCGCTGCATCCATGA

Peptide Sequence

PEP ID	Os04t0505200-03
PEP Infomation	pep chromosome:IRGSP-1.0:4:25218005:25219670:1 gene:Os04g0505200 transcript:Os04t0505200-03 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Protein binding protein. (Os04t0505200-01);Leucine-rich repeat, plant specific containing protein. (Os04t0505200-02);Similar to Protein binding protein. (Os04t0505200-03)
Sequence	MAGSLSAALCLTLFCLLGACIAPGARANGRHSRRDLDINLGNGNGGGISIGIGGSGGGGG GGSSGGSSGGGGDLRPCDFENERLYKAYKVIQKFRRTVTCDPQNIISSWSGADLCSTYKG FFCERPPNITDRTIASVDFNGYNLQASSLKEFVDALPDLALFHANSNNFGGAVPDLSRLQ YFYELDLSNNKLSPATFPTDVLKLKNATFVDIRFNSFYGELPGGVFCSFPQVQAIFVNNN QFSGSLPDNIGDSPVNYLSLANNNFTGEIPKSIARMANTLFEVLFLNNKLSGCLPYELGL LAKATVIDAGTNQLTGPIPASFACLRKVEQLNLADNLLYGEVPNALCELAFSWSGRLRNL TLSNNYFTSLGSCCWDLIKEGKLNVDRNCIPYAPNQRSHDECAAFFHRTKTSACPCNTYV PCGHNKHSAAGAGSEQDTAAAEEDKYRTYSALHP

Transcript Sequence

Transcript ID	Os04t0505200-03
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:25218005:25219670:1 gene:Os04g0505200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Protein binding protein. (Os04t0505200-01);Leucine-rich repeat, plant specific containing protein. (Os04t0505200-02);Similar to Protein binding protein. (Os04t0505200-03)
Sequence	AGCTAGTGTGCCGTGCCCGTGATCGGAGATGGCAGGCTCGTTGTCTGCCGCGCTGTGCCT CACTCTCTTCTGCTTGCTGGGGGCATGCATTGCGCCCGGGGCGCGTGCTAACGGCCGGCA CAGCCGGCGGGACCTCGACATCAACCTCGGCAACGGCAACGGCGGGGGCATCAGCATCGG CATAGGAGGAAGTGGTGGTGGTGGTGGTGGTGGCTCCAGTGGTGGCTCCAGCGGCGGCGG CGGCGATCTGCGGCCGTGCGACTTCGAGAACGAGCGGCTGTACAAGGCGTACAAGGTGAT CCAGAAGTTCAGGAGGACGGTGACGTGCGACCCGCAGAACATCATCTCCTCCTGGAGCGG CGCCGACCTGTGCAGCACCTACAAGGGGTTCTTCTGCGAGCGGCCGCCCAACATCACCGA CCGGACCATCGCCTCCGTCGACTTCAACGGCTACAACCTGCAGGCGTCGTCGCTGAAGGA GTTCGTGGACGCCCTCCCGGACCTGGCGCTGTTCCACGCCAACAGCAACAACTTCGGCGG CGCCGTGCCGGACCTCAGCCGGCTGCAGTACTTCTACGAGCTCGACCTGAGCAACAACAA GCTGTCGCCCGCCACGTTCCCGACGGACGTGCTCAAGCTGAAGAACGCCACCTTCGTCGA CATCCGCTTCAACAGCTTCTACGGCGAGCTCCCCGGCGGCGTCTTCTGCTCGTTCCCGCA GGTGCAGGCCATCTTCGTCAACAACAACCAGTTCTCCGGCAGCCTGCCCGACAACATCGG CGACTCGCCGGTGAACTACCTCTCCCTCGCCAACAACAACTTCACGGGGGAGATCCCCAA GTCGATCGCGCGCATGGCCAACACGCTCTTCGAGGTGCTGTTCCTCAACAACAAGCTCAG CGGCTGCCTCCCCTACGAGCTCGGCCTGCTCGCCAAGGCCACCGTCATCGACGCCGGCAC CAACCAGCTCACCGGCCCGATCCCGGCGTCGTTCGCGTGCCTGCGCAAGGTGGAGCAGCT CAACCTGGCGGACAACCTCCTCTACGGCGAGGTGCCCAACGCGCTGTGCGAGCTCGCCTT CTCGTGGTCGGGCCGCCTCAGGAACCTCACGCTCTCCAACAACTACTTCACGTCGCTCGG CTCCTGCTGCTGGGACCTGATCAAGGAGGGGAAGCTCAACGTCGACCGCAACTGCATCCC GTACGCGCCCAACCAGCGGTCGCACGACGAGTGCGCCGCCTTCTTCCACCGGACCAAGAC CTCCGCGTGCCCCTGCAACACCTACGTGCCGTGTGGCCACAACAAGCACTCCGCCGCCGG CGCCGGCAGCGAGCAGGACACGGCGGCGGCGGAGGAGGACAAGTACAGGACTTACTCGGC GCTGCATCCATGAGCGCGAGAAGGAAGGGCAAAAGCACTGTGCTTCTCGTGAACGTGACA CGATTATTGATTGATTCGGTTGCTCTTGGCTGGTTGTGTTAATTGATGTGTTGTGTCTAC TTTTTTGTTACTTTTGTTTCCTTTCTCATCCACTGTTACGTACGGCCAACTTAGTTTCAC ATATATCTGCATGTTTAGGTAAGGTAATGGAGATTTTATTTTGATGAACCACAGAAGCTT GTAATAATTCAGATCACCATGAAAGATCAGCTTTAAATTTCCCTGC