Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0504500-01
CDS Infomation	cds chromosome:IRGSP-1.0:4:25182303:25186566:1 gene:Os04g0504500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PLETHORA 4 description:Similar to protein BABY BOOM 1. (Os04t0504500-01)
Sequence	ATGGCTTCTGCAGATAACTGGCTAGGCTTCTCGCTCTCCGGCCAAGGCAACCCACAGCAT CACCAGAACGGCTCGCCGTCTGCCGCCGGCGACGCCGCCATCGACATCTCCGGCTCAGGC GACTTCTATGGTCTGCCAACGCCGGACGCACACCACATCGGCATGGCGGGCGAAGACGCG CCCTATGGCGTCATGGATGCTTTCAACAGAGGCACCCATGAAACCCAAGATTGGGCGATG AGGGGTTTGGACTACGGCGGCGGCTCCTCCGACCTCTCGATGCTCGTCGGCTCGAGCGGC GGCGGGAGGAGGACGGTGGCCGGCGACGGCGTCGGCGAGGCGCCGAAGCTGGAGAACTTC CTCGACGGCAACTCATTCTCCGACGTGCACGGCCAAGCCGCCGGCGGGTACCTCTACTCC GGAAGCGCTGTCGGCGGCGCCGGTGGTTACAGTAACGGCGGATGCGGCGGCGGAACCATA GAGCTGTCCATGATCAAGACGTGGCTCCGGAGCAACCAGTCGCAGCAGCAGCCATCGCCG CCGCAGCACGCTGATCAGGGCATGAGCACCGACGCCAGCGCGAGCAGCTACGCGTGCTCC GACGTGCTGGTGGGGAGCTGCGGCGGCGGCGGCGCCGGGGGCACGGCGAGCTCGCATGGG CAGGGCCTGGCGCTGTCGATGAGCACGGGGTCGGTGGCCGCCGCCGGAGGGGGCGGCGCC GTCGTCGCGGCCGAGAGCTCGTCGTCGGAGAACAAGCGGGTGGATTCGCCGGGCGGCGCC GTGGACGGCGCCGTCCCGAGGAAATCCATCGACACCTTCGGGCAAAGGACGTCTATATAC CGAGGTGTAACAAGGCATAGATGGACAGGAAGATATGAAGCTCATCTGTGGGATAATAGC TGTAGGAGAGAAGGCCAAAGTCGCAAGGGGAGACAGGTTTATTTGGGCGGTTATGACAAA GAAGATAAGGCGGCTCGGGCTTATGATTTGGCAGCTCTAAAATACTGGGGCACGACCACA ACAACAAATTTCCCAATGAGTAATTATGAAAAGGAGCTAGAGGAAATGAAACACATGACC AGGCAGGAGTACATTGCACATCTTAGAAGGAATAGCAGTGGATTTTCTCGTGGTGCATCC AAATATCGTGGTGTTACTAGGCATCATCAGCATGGGAGATGGCAGGCAAGGATAGGGCGA GTTGCAGGCAACAAGGATATCTACCTAGGCACCTTCAGCACCGAGGAGGAGGCCGCCGAG GCGTACGACATCGCCGCCATCAAGTTCCGCGGGCTCAACGCCGTCACCAACTTCGACATG AGCCGGTACGACGTCAAGAGCATCCTGGACAGCAGCACGCTGCCGGTCGGCGGCGCGGCG CGGCGGCTCAAGGAGGCGGAGGTCGCCGCCGCCGCCGCGGGCGGCGGCGTGATCGTCTCC CACCTGGCCGACGGCGGTGTGGGTGGGTACTACTACGGGTGCGGCCCGACCATCGCGTTC GGCGGCGGCGGCCAGCAGCCGGCGCCGCTCGCCGTGCACTACCCGTCGTACGGCCAGGCC AGCGGGTGGTGCAAGCCGGAGCAGGACGCGGTGATCGCGGCCGGGCACTGCGCGACGGAC CTCCAGCACCTGCACCTCGGGAGCGGCGGCGCCGCCGCCACCCACAACTTCTTCCAGCAG CCGGCGTCAAGCTCGGCCGTCTACGGCAACGGCGGCGGCGGCGGCGGCAACGCGTTCATG ATGCCGATGGGCGCCGTGGTGGCCGCCGCCGATCACGGCGGGCAGAGCAGCGCCTACGGC GGTGGCGACGAGAGCGGGAGGCTCGTCGTGGGGTACGACGGCGTCGTCGACCCGTACGCG GCCATGAGAAGCGCGTACGAGCTCTCGCAGGGCTCGTCGTCGTCGTCGGTGAGCGTCGCG AAGGCGGCGAACGGGTACCCGGACAACTGGAGCTCGCCGTTCAACGGCATGGGATGA

Peptide Sequence

PEP ID	Os04t0504500-01
PEP Infomation	pep chromosome:IRGSP-1.0:4:25182303:25186566:1 gene:Os04g0504500 transcript:Os04t0504500-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PLETHORA 4 description:Similar to protein BABY BOOM 1. (Os04t0504500-01)
Sequence	MASADNWLGFSLSGQGNPQHHQNGSPSAAGDAAIDISGSGDFYGLPTPDAHHIGMAGEDA PYGVMDAFNRGTHETQDWAMRGLDYGGGSSDLSMLVGSSGGGRRTVAGDGVGEAPKLENF LDGNSFSDVHGQAAGGYLYSGSAVGGAGGYSNGGCGGGTIELSMIKTWLRSNQSQQQPSP PQHADQGMSTDASASSYACSDVLVGSCGGGGAGGTASSHGQGLALSMSTGSVAAAGGGGA VVAAESSSSENKRVDSPGGAVDGAVPRKSIDTFGQRTSIYRGVTRHRWTGRYEAHLWDNS CRREGQSRKGRQVYLGGYDKEDKAARAYDLAALKYWGTTTTTNFPMSNYEKELEEMKHMT RQEYIAHLRRNSSGFSRGASKYRGVTRHHQHGRWQARIGRVAGNKDIYLGTFSTEEEAAE AYDIAAIKFRGLNAVTNFDMSRYDVKSILDSSTLPVGGAARRLKEAEVAAAAAGGGVIVS HLADGGVGGYYYGCGPTIAFGGGGQQPAPLAVHYPSYGQASGWCKPEQDAVIAAGHCATD LQHLHLGSGGAAATHNFFQQPASSSAVYGNGGGGGGNAFMMPMGAVVAAADHGGQSSAYG GGDESGRLVVGYDGVVDPYAAMRSAYELSQGSSSSSVSVAKAANGYPDNWSSPFNGMG

Transcript Sequence

Transcript ID	Os04t0504500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:25182303:25186566:1 gene:Os04g0504500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PLETHORA 4 description:Similar to protein BABY BOOM 1. (Os04t0504500-01)
Sequence	GACCTTGCTAGCTACACCTGAAGATCAGCTGGTTGCCGACTTGCCATTGCCGATGCAAGA TTCCGGTAGCTGCACTGATCGATCAAAGAACAATCTGGCTAGCAATCTTGGTTCTTGTTT GCAAATTAATCAGTGAAAAGATACACGAAGAAAGCTAATTAAGCTAGTGATTTTGGTGTC TAGTAGCTAATGGCTTCTGCAGATAACTGGCTAGGCTTCTCGCTCTCCGGCCAAGGCAAC CCACAGCATCACCAGAACGGCTCGCCGTCTGCCGCCGGCGACGCCGCCATCGACATCTCC GGCTCAGGCGACTTCTATGGTCTGCCAACGCCGGACGCACACCACATCGGCATGGCGGGC GAAGACGCGCCCTATGGCGTCATGGATGCTTTCAACAGAGGCACCCATGAAACCCAAGAT TGGGCGATGAGGGGTTTGGACTACGGCGGCGGCTCCTCCGACCTCTCGATGCTCGTCGGC TCGAGCGGCGGCGGGAGGAGGACGGTGGCCGGCGACGGCGTCGGCGAGGCGCCGAAGCTG GAGAACTTCCTCGACGGCAACTCATTCTCCGACGTGCACGGCCAAGCCGCCGGCGGGTAC CTCTACTCCGGAAGCGCTGTCGGCGGCGCCGGTGGTTACAGTAACGGCGGATGCGGCGGC GGAACCATAGAGCTGTCCATGATCAAGACGTGGCTCCGGAGCAACCAGTCGCAGCAGCAG CCATCGCCGCCGCAGCACGCTGATCAGGGCATGAGCACCGACGCCAGCGCGAGCAGCTAC GCGTGCTCCGACGTGCTGGTGGGGAGCTGCGGCGGCGGCGGCGCCGGGGGCACGGCGAGC TCGCATGGGCAGGGCCTGGCGCTGTCGATGAGCACGGGGTCGGTGGCCGCCGCCGGAGGG GGCGGCGCCGTCGTCGCGGCCGAGAGCTCGTCGTCGGAGAACAAGCGGGTGGATTCGCCG GGCGGCGCCGTGGACGGCGCCGTCCCGAGGAAATCCATCGACACCTTCGGGCAAAGGACG TCTATATACCGAGGTGTAACAAGGCATAGATGGACAGGAAGATATGAAGCTCATCTGTGG GATAATAGCTGTAGGAGAGAAGGCCAAAGTCGCAAGGGGAGACAGGTTTATTTGGGCGGT TATGACAAAGAAGATAAGGCGGCTCGGGCTTATGATTTGGCAGCTCTAAAATACTGGGGC ACGACCACAACAACAAATTTCCCAATGAGTAATTATGAAAAGGAGCTAGAGGAAATGAAA CACATGACCAGGCAGGAGTACATTGCACATCTTAGAAGGAATAGCAGTGGATTTTCTCGT GGTGCATCCAAATATCGTGGTGTTACTAGGCATCATCAGCATGGGAGATGGCAGGCAAGG ATAGGGCGAGTTGCAGGCAACAAGGATATCTACCTAGGCACCTTCAGCACCGAGGAGGAG GCCGCCGAGGCGTACGACATCGCCGCCATCAAGTTCCGCGGGCTCAACGCCGTCACCAAC TTCGACATGAGCCGGTACGACGTCAAGAGCATCCTGGACAGCAGCACGCTGCCGGTCGGC GGCGCGGCGCGGCGGCTCAAGGAGGCGGAGGTCGCCGCCGCCGCCGCGGGCGGCGGCGTG ATCGTCTCCCACCTGGCCGACGGCGGTGTGGGTGGGTACTACTACGGGTGCGGCCCGACC ATCGCGTTCGGCGGCGGCGGCCAGCAGCCGGCGCCGCTCGCCGTGCACTACCCGTCGTAC GGCCAGGCCAGCGGGTGGTGCAAGCCGGAGCAGGACGCGGTGATCGCGGCCGGGCACTGC GCGACGGACCTCCAGCACCTGCACCTCGGGAGCGGCGGCGCCGCCGCCACCCACAACTTC TTCCAGCAGCCGGCGTCAAGCTCGGCCGTCTACGGCAACGGCGGCGGCGGCGGCGGCAAC GCGTTCATGATGCCGATGGGCGCCGTGGTGGCCGCCGCCGATCACGGCGGGCAGAGCAGC GCCTACGGCGGTGGCGACGAGAGCGGGAGGCTCGTCGTGGGGTACGACGGCGTCGTCGAC CCGTACGCGGCCATGAGAAGCGCGTACGAGCTCTCGCAGGGCTCGTCGTCGTCGTCGGTG AGCGTCGCGAAGGCGGCGAACGGGTACCCGGACAACTGGAGCTCGCCGTTCAACGGCATG GGATGATCTAGCTACGCAGCGGCCGCGATGTTGCAAGAAGTAAATTCTTGAGCTTAATTA GCGGCAAGTTTAGGATTAGTTCATCATCAGAGTCTACACCACTTGACCAGTACATGCATG AGACACGTATACGTGCGTTGGTAGTATAACATGTGCCTTCTGAAGGCTGGTAATGGCAGG TATTAGGGGGTAATTAAGATTTGTTGT