Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os04t0504200-01
CDS Infomation

cds chromosome:IRGSP-1.0:4:25174782:25175746:-1 gene:Os04g0504200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os04t0504200-01)
Sequence

ATGAATAGTGCGGCGGAGACAGAGACCGAGGGAGGCGGCGGCGCCGCGGCCGTGGAGCCG
CAGGTGGTGGTGGTGGAGCGCGTGGTGACGGTGGAGTACCTGGAGCCGTCCATGTCGCGG
GGCCTGCTCGGCATGTTCCCGGACTCCTCCGCCTTCGACTTCGACTACTCCCAGAGCGGC
ATCTGGTCCCCGCTGAACAAGGTGCCCCGCGCGTCGTCGTCGCCGCCGCCGCCGCCGCGC
TCCGGCGGAGGCGGGGCCGAGGGCTCGAGGGACTTTCTCATCGCCAACCCGAAGCGCAGG
GCGAGGGCCGCCATCGGGGGCAGGTCGTCGAGGTCGCGGCGGCGGCGGCTGAGGCTGCGG
CGGGAGGACGGCTCATTCCTGAACCTCCACGAGACGGGCTGCGCGAGGCTGGACTTCTCG
CCGCCGCCACCATCGTCGCCTCTCCCGGCCAAGGAGGAAGGGTGGAGGCGGGTGCTCAAG
GCGGCGATCAGGAAGTTCAAATCGCGGCAGCGCCGATCCCGGCCGGCTCCCCTGCTCCAG
ATGATGCTGCCAACGCTATGA

Peptide Sequence

PEP ID

Os04t0504200-01
PEP Infomation

pep chromosome:IRGSP-1.0:4:25174782:25175746:-1 gene:Os04g0504200 transcript:Os04t0504200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os04t0504200-01)
Sequence

MNSAAETETEGGGGAAAVEPQVVVVERVVTVEYLEPSMSRGLLGMFPDSSAFDFDYSQSG
IWSPLNKVPRASSSPPPPPRSGGGGAEGSRDFLIANPKRRARAAIGGRSSRSRRRRLRLR
REDGSFLNLHETGCARLDFSPPPPSSPLPAKEEGWRRVLKAAIRKFKSRQRRSRPAPLLQ
MMLPTL

Transcript Sequence

Transcript ID

Os04t0504200-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:4:25174782:25175746:-1 gene:Os04g0504200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os04t0504200-01)
Sequence

ACTTCCTCTCCTAGCTCCGACGATCGCCGGAGACCACCACTAGTAAGCTTCGAGGCCGAG
ATGAATAGTGCGGCGGAGACAGAGACCGAGGGAGGCGGCGGCGCCGCGGCCGTGGAGCCG
CAGGTGGTGGTGGTGGAGCGCGTGGTGACGGTGGAGTACCTGGAGCCGTCCATGTCGCGG
GGCCTGCTCGGCATGTTCCCGGACTCCTCCGCCTTCGACTTCGACTACTCCCAGAGCGGC
ATCTGGTCCCCGCTGAACAAGGTGCCCCGCGCGTCGTCGTCGCCGCCGCCGCCGCCGCGC
TCCGGCGGAGGCGGGGCCGAGGGCTCGAGGGACTTTCTCATCGCCAACCCGAAGCGCAGG
GCGAGGGCCGCCATCGGGGGCAGGTCGTCGAGGTCGCGGCGGCGGCGGCTGAGGCTGCGG
CGGGAGGACGGCTCATTCCTGAACCTCCACGAGACGGGCTGCGCGAGGCTGGACTTCTCG
CCGCCGCCACCATCGTCGCCTCTCCCGGCCAAGGAGGAAGGGTGGAGGCGGGTGCTCAAG
GCGGCGATCAGGAAGTTCAAATCGCGGCAGCGCCGATCCCGGCCGGCTCCCCTGCTCCAG
ATGATGCTGCCAACGCTATGATCGATCGATCGACCGAGCAATCGATCTCGTGGTTCGCTC
GTTCAGTTCGATGTTGCATGAATCAATCACCACGCGTTCTTTCAGTCGGATTTGAATCGC
CGGCCGCCCGCGACACGCCCCTTCTTCGTGTAGTATAATTTAGAAGTTACTGAATTTATC
CGTATACCACATGTAATTTGTAAGTTGTGCTTTGTAACGACGCTCTCGCTACAGATTCAA
ATTTGAATATATAAATTCAATCGACTTTTTAGGCG