Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0503800-01
CDS Infomation	cds chromosome:IRGSP-1.0:4:25149777:25152160:1 gene:Os04g0503800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Trafficking protein particle complex protein 2 (Sedlin) (MBP-1 interacting protein-2A) (MIP-2A). (Os04t0503800-01)
Sequence	TCTTCTGACATTCACTTACTGTGGCAGAAAGAAGATCTGGCTTATCAGCACCAGTTCATT CTGCATGCTGCTTTAGATGTTGTTCAGGACCTAGCATGGTCCACAAATGCAATGTTCCTG AAGTCGGTCGACAGATTCAACGACCTTGTTGTGTCTGTTTATGTAACTGCAGGTCATGCT AGATTCATGTTGCTTCATGATTCACGTAGTGAGGATGGAATTAAAAGCTTTTTTCAAGAG GTCCATGAGCTTTATATCAAGATATTCCTCAATCCCCTCTATCTGCCTGGATCTCGCATC ACATCCTCTCATTTTGATACCAAGGTCAGGGCTCTCGCAAGGAGGTATCTGTAG

Peptide Sequence

PEP ID	Os04t0503800-01
PEP Infomation	pep chromosome:IRGSP-1.0:4:25149777:25152160:1 gene:Os04g0503800 transcript:Os04t0503800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Trafficking protein particle complex protein 2 (Sedlin) (MBP-1 interacting protein-2A) (MIP-2A). (Os04t0503800-01)
Sequence	SSDIHLLWQKEDLAYQHQFILHAALDVVQDLAWSTNAMFLKSVDRFNDLVVSVYVTAGHA RFMLLHDSRSEDGIKSFFQEVHELYIKIFLNPLYLPGSRITSSHFDTKVRALARRYL

Transcript Sequence

Transcript ID	Os04t0503800-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:25149777:25152160:1 gene:Os04g0503800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Trafficking protein particle complex protein 2 (Sedlin) (MBP-1 interacting protein-2A) (MIP-2A). (Os04t0503800-01)
Sequence	CTTGGCTCTGATCTCTCACCCGAGATCCGAGCACGAAGGCGGCCGCGGGCGGATCCGGCG AACTTTCCAACGCCGTGAATCGCCCCCTCCCACGTTGGAGAGTAACTAGTCCAAGTGTTG GTGGAAATGGCAAGCACGGCGTGCTTCGCGATTGTTAGTAAGAACGACATCCCAATCTAT GAGGCAGAAGTCGGATCTGCACCGAAAGTATGTATTCCACGCCTCATTACTTCTATGAAT TTAATTAATTGCATTATGTTGCTGTTTATAGTGCCTTGTGTTCAGGTCACAATGTCAACA TTTTGGTTTTGTTGATATAAAAGCGACACTAATATGGAAATGGATAATCCCCTCTCTCAA AAAGAAAGAAAGAAACAGGTGTTGGTTGAACATAAATCATGTTGAATCAGACTCTTGATT CCCATGAAGATGCCCAATGGAATAGTTGAGTTTTGTATAAAACTGGATATAGATGGTTTG CTACCTTTCTACAGCGTAGTGATTTTTGTTGTTGCCATTGTTTTCCTCCCTCCCTTGTCT CCATTGTTTTCTAGGATATTGATTCATATGTAATAGTGTAAAGTTGCTAATTGATATTCA GTAATATAATGGAGCCTTCATGGGATGAGAATTTTTTTCCTTAGGTAACATCATACTGAA TTACTAATGTGCATGTCTAATCTTCTGACATTCACTTACTGTGGCAGAAAGAAGATCTGG CTTATCAGCACCAGTTCATTCTGCATGCTGCTTTAGATGTTGTTCAGGACCTAGCATGGT CCACAAATGCAATGTTCCTGAAGTCGGTCGACAGATTCAACGACCTTGTTGTGTCTGTTT ATGTAACTGCAGGTCATGCTAGATTCATGTTGCTTCATGATTCACGTAGTGAGGATGGAA TTAAAAGCTTTTTTCAAGAGGTCCATGAGCTTTATATCAAGATATTCCTCAATCCCCTCT ATCTGCCTGGATCTCGCATCACATCCTCTCATTTTGATACCAAGGTCAGGGCTCTCGCAA GGAGGTATCTGTAGGGAACAGTCATGGAGGTACTATAAGCTTCACAGCTAATAATATAGA AGCATGCAGAGAGAAGACAAAATACACTACTTTTTTTTCTTCCATTTATTTCCTGCTGTC ATTATTCAGACTCCTGAGAAATGCTGATTGTTTTTCTTTGGGCTTTCTCCAGTGCTTATG AAACATGATTTCAATTTTCACCCATTTTGTTCTGTACAGGGAAAATCTATAGAAATGTAC CGTTTCCCTTTTACCGTATAGCATGGACACATTGTATTGATTTCCTGTTTTCCGTGGCGC GCTAAGACACTCAAATTTAGTATTGTGAATTTTACTCCT