Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0503500-02
CDS Infomation	cds chromosome:IRGSP-1.0:4:25126761:25134348:-1 gene:Os04g0503500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Leucine-rich repeat, cysteine-containing subtype containing protein. (Os04t0503500-01);Leucine-rich repeat, cysteine-containing subtype containing protein. (Os04t0503500-02)
Sequence	ATGGGAAGTGCTTGCTCTAGGAAGAGAGGCCAGCTGCTTGTTGATGAGGAAGATCTCTAC AGTGCAAGGTTCTCCAAGAGCAGCAGCTTCAAGTGGCTACTGCACACCTTGCCCCGCAGC GGCTCTGATGTACACAGGAAGGTGCAGGGACCAGTGCCTGTGCGGTGCCCATCGCTAATG GAGCTCTGTGTGGCCAAAGTCCGCGAGGATATTGGGAAGTATTCTGATTTCTCGCTGCTG CCTAGAGATCTTAGTCAGCAGGTATTTAATGAACTGGTGGAGTGGAACATTCTCACTGAA GAGTTGCTTGGAGCTTTTCGTGATTGTGCATTGCAGGACATCTGTTTGGCAGACTACCCT GGGGTGAGGGATGCTTGGATGGAAGTAGCGGCTTCTCAAGGGCAATCATTGTTATCTGTT GATATCTCTTGCTCTGATGTGACTGATGGTGGACTGAATCAACTCAAGGATTGCATCAAC TTGCAAAGTTTGTCATGCAATTACTGTGATCAGATATCGGAGCATGGACTTAAAACATTG TCAGGCCTCTCAAATGTGACATCCCTGAGCTTTAAAAAATGTTCTGCTGTTACTGCTGAA GGAGCTAAAGCCTTTGCAAACATGGTTAATTTGGGTAGCTTGGACCTTGAGCGATGTCCG AAGATTCATGGTGGACTTGTTCATTTAAAAGGCTTGAGAAAACTGGAAAAGCTAAATTTG AGGTATTGTAATGGCATCACAGATTCTGATATGAAACATTTATCAGATCTTACAAATTTG AGAGAGCTTCAACTTTCTTGCTGCAAAATAAGTGATCTTGGTGTTTCTTATCTAAGAGGT CTATCGAAGCTAGCTCACCTAAACCTGGAGGGCTGTGCAGTAACTGCTGCTTGTTTGGAG GTTATTTCAGGATTGGCTTCATTGGTATTGTTGAATCTTAGTAGATGTGGAGTATATGAC GAAGGCTGTGAGCATTTGGAAGGTCTTGTCAAGTTGAAGGTTCTCAATTTAGGGTTCAAC TATATTACAGATGCCTGCTTGGTTCATCTAAAAGAACTGATCAATTTGGAGTGTTTGAAC TTGGACTCATGCAAGATTGGTGACGAGGGGCTAGCACATTTGAAAGGACTTCTGAAACTA AGAAGCTTGGAACTTTCAGACACAGAAGTTGGGAGCAATGGACTTCGTCATCTCTCTGGC CTACGGAATTTGCAGAGCATCAATCTCTCTTTTACATTGGTTACGGACATTGGCTTGAAG AAAATTTCTGGCCTGAATTCACTCAGATCCCTTAATCTTGATAATCGCCAAATCACAGAT AATGGTTTGGCAGCTCTTACATGTCTCACTGGGTTGACACACCTTGATCTATTTGGAGCT CGTATAACTGATGCTGGGACAAACTGCTTGAAATATTTCAAGAATCTACAGTCCCTTGAG GTCTGCGGTGGGTTAATTACAGATGCTGGAGTGAAGAATATCAAAGACCTCAAAGCTCTG ACGCTGCTTAACCTATCTCAAAATGGCAACCTCACTGACAAATCCTTAGAGCTGATTTCC CGCCTCACTGCCTTGGTCTCCCTGAACGTGTCGAACTCTCGGGTGTCGAATTCTGGGCTC CACCATCTGAAGCCACTCCAGAACCTGAGGTCCTTGTCTCTGGAGTCCTGCAAGGTGACC GCGATTGAGATCAAGAAGCTCCAGTTGGCTGCCCTGCCCAATCTCGTCAGTGTGCGGCCC GAGTAA

Peptide Sequence

PEP ID	Os04t0503500-02
PEP Infomation	pep chromosome:IRGSP-1.0:4:25126761:25134348:-1 gene:Os04g0503500 transcript:Os04t0503500-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Leucine-rich repeat, cysteine-containing subtype containing protein. (Os04t0503500-01);Leucine-rich repeat, cysteine-containing subtype containing protein. (Os04t0503500-02)
Sequence	MGSACSRKRGQLLVDEEDLYSARFSKSSSFKWLLHTLPRSGSDVHRKVQGPVPVRCPSLM ELCVAKVREDIGKYSDFSLLPRDLSQQVFNELVEWNILTEELLGAFRDCALQDICLADYP GVRDAWMEVAASQGQSLLSVDISCSDVTDGGLNQLKDCINLQSLSCNYCDQISEHGLKTL SGLSNVTSLSFKKCSAVTAEGAKAFANMVNLGSLDLERCPKIHGGLVHLKGLRKLEKLNL RYCNGITDSDMKHLSDLTNLRELQLSCCKISDLGVSYLRGLSKLAHLNLEGCAVTAACLE VISGLASLVLLNLSRCGVYDEGCEHLEGLVKLKVLNLGFNYITDACLVHLKELINLECLN LDSCKIGDEGLAHLKGLLKLRSLELSDTEVGSNGLRHLSGLRNLQSINLSFTLVTDIGLK KISGLNSLRSLNLDNRQITDNGLAALTCLTGLTHLDLFGARITDAGTNCLKYFKNLQSLE VCGGLITDAGVKNIKDLKALTLLNLSQNGNLTDKSLELISRLTALVSLNVSNSRVSNSGL HHLKPLQNLRSLSLESCKVTAIEIKKLQLAALPNLVSVRPE

Transcript Sequence

Transcript ID	Os04t0503500-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:25126761:25134348:-1 gene:Os04g0503500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Leucine-rich repeat, cysteine-containing subtype containing protein. (Os04t0503500-01);Leucine-rich repeat, cysteine-containing subtype containing protein. (Os04t0503500-02)
Sequence	CCTCTCCTCCCCCCTCTCTCTTTCTCGGCGAGGATTGGCTGTGTGATTAGAGAATGGGGC CAAAGAGAGCGAAGTCTATGCCAAGTCGTAATCGTGCTGGGAATGGATGACAAAGAATCA CACAGTCACGAGCTAGAATGATATGCGCTTTTTAGTCCATCAAGAAGAAGTGATTGGTTT GTGATCGGTGCTCGCATCGTCGCCATGGGAAGTGCTTGCTCTAGGAAGAGAGGCCAGCTG CTTGTTGATGAGGAAGATCTCTACAGTGCAAGGTTCTCCAAGAGCAGCAGCTTCAAGTGG CTACTGCACACCTTGCCCCGCAGCGGCTCTGATGTACACAGGAAGGTGCAGGGACCAGTG CCTGTGCGGTGCCCATCGCTAATGGAGCTCTGTGTGGCCAAAGTCCGCGAGGATATTGGG AAGTATTCTGATTTCTCGCTGCTGCCTAGAGATCTTAGTCAGCAGGTATTTAATGAACTG GTGGAGTGGAACATTCTCACTGAAGAGTTGCTTGGAGCTTTTCGTGATTGTGCATTGCAG GACATCTGTTTGGCAGACTACCCTGGGGTGAGGGATGCTTGGATGGAAGTAGCGGCTTCT CAAGGGCAATCATTGTTATCTGTTGATATCTCTTGCTCTGATGTGACTGATGGTGGACTG AATCAACTCAAGGATTGCATCAACTTGCAAAGTTTGTCATGCAATTACTGTGATCAGATA TCGGAGCATGGACTTAAAACATTGTCAGGCCTCTCAAATGTGACATCCCTGAGCTTTAAA AAATGTTCTGCTGTTACTGCTGAAGGAGCTAAAGCCTTTGCAAACATGGTTAATTTGGGT AGCTTGGACCTTGAGCGATGTCCGAAGATTCATGGTGGACTTGTTCATTTAAAAGGCTTG AGAAAACTGGAAAAGCTAAATTTGAGGTATTGTAATGGCATCACAGATTCTGATATGAAA CATTTATCAGATCTTACAAATTTGAGAGAGCTTCAACTTTCTTGCTGCAAAATAAGTGAT CTTGGTGTTTCTTATCTAAGAGGTCTATCGAAGCTAGCTCACCTAAACCTGGAGGGCTGT GCAGTAACTGCTGCTTGTTTGGAGGTTATTTCAGGATTGGCTTCATTGGTATTGTTGAAT CTTAGTAGATGTGGAGTATATGACGAAGGCTGTGAGCATTTGGAAGGTCTTGTCAAGTTG AAGGTTCTCAATTTAGGGTTCAACTATATTACAGATGCCTGCTTGGTTCATCTAAAAGAA CTGATCAATTTGGAGTGTTTGAACTTGGACTCATGCAAGATTGGTGACGAGGGGCTAGCA CATTTGAAAGGACTTCTGAAACTAAGAAGCTTGGAACTTTCAGACACAGAAGTTGGGAGC AATGGACTTCGTCATCTCTCTGGCCTACGGAATTTGCAGAGCATCAATCTCTCTTTTACA TTGGTTACGGACATTGGCTTGAAGAAAATTTCTGGCCTGAATTCACTCAGATCCCTTAAT CTTGATAATCGCCAAATCACAGATAATGGTTTGGCAGCTCTTACATGTCTCACTGGGTTG ACACACCTTGATCTATTTGGAGCTCGTATAACTGATGCTGGGACAAACTGCTTGAAATAT TTCAAGAATCTACAGTCCCTTGAGGTCTGCGGTGGGTTAATTACAGATGCTGGAGTGAAG AATATCAAAGACCTCAAAGCTCTGACGCTGCTTAACCTATCTCAAAATGGCAACCTCACT GACAAATCCTTAGAGCTGATTTCCCGCCTCACTGCCTTGGTCTCCCTGAACGTGTCGAAC TCTCGGGTGTCGAATTCTGGGCTCCACCATCTGAAGCCACTCCAGAACCTGAGGTCCTTG TCTCTGGAGTCCTGCAAGGTGACCGCGATTGAGATCAAGAAGCTCCAGTTGGCTGCCCTG CCCAATCTCGTCAGTGTGCGGCCCGAGTAATCTGGTAGCTGCACATGTGTCCACATGTAA ATATCCACCTGCTTAGAGCAGGACAAATGTACATATTCCCACAAGAACAAGCTCGAGTGA TCTGTACGTCAGTCCTGCTTGTATCGGTGTGTCTGGTCGCCCTGGTGCTGAAGGGTCTGA TGGATGGCCTAGTGGTGAAGGGCTGGCACGTATTTAGGCCGTGTAAATATGTAGCGGTGC TGATGGGAAGGAACAACTGTAAATATGGCGTGCTTCCTCTGCATTTTCGATGTTATGTAA TGTTTCGTGTTATCGTGTTAATGAACTGGTATTGTTGCTTGACC