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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os04t0502300-01
CDS Infomation

cds chromosome:IRGSP-1.0:4:25076814:25079035:-1 gene:Os04g0502300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to 40S ribosomal protein S11. (Os04t0502300-01)
Sequence

ATGGCGGAGCAGACTGAGAGGGCATTCTTGAAGCAGCCTAAGGTTTTTCTCTGTCCTAAG
AAAACCACCAAGGGGAAGAAGCCTGGCAAGGGCGGGAATAGGTTCTGGAAGAACATTGGC
CTTGGGTTCAAGACACCCAGGGAAGCCATCGAAGGAACCTACATTGACAAGAAATGCCCA
TTCACTGGTACTGTATCAATTAGGGGTCGTATCATAGCTGGAACATGTCATAGTGCTAAG
ATGAACAGGACCATTATTGTTCGGAGGAATTATCTGCACTTTGTCAAGAAGTACCAGAGG
TACGAGAAGAGGCACTCCAATATTCCTGCTCACATTTCACCGTGCTTCCGTGTTAAGGAA
GGAGATCACGTGATCATTGGCCAGTGCAGGCCACTGTCAAAGACCGTGAGGTTCAATGTG
CTGAAGGTCATTCCGGCAGGGTCAAAGAGTGGTGCAGGGAAGAAGGTTTTCACAGCCGCT
TAA

Peptide Sequence

PEP ID

Os04t0502300-01
PEP Infomation

pep chromosome:IRGSP-1.0:4:25076814:25079035:-1 gene:Os04g0502300 transcript:Os04t0502300-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to 40S ribosomal protein S11. (Os04t0502300-01)
Sequence

MAEQTERAFLKQPKVFLCPKKTTKGKKPGKGGNRFWKNIGLGFKTPREAIEGTYIDKKCP
FTGTVSIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE
GDHVIIGQCRPLSKTVRFNVLKVIPAGSKSGAGKKVFTAA

Transcript Sequence

Transcript ID

Os04t0502300-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:4:25076814:25079035:-1 gene:Os04g0502300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to 40S ribosomal protein S11. (Os04t0502300-01)
Sequence

CTCGGGAATTTCTTCTTCTCCGCTGCTGCTCCTCCCGTGCCGCCGCCGTCTCGCGCCAGT
GCGTCTCTTCCTCGCGCGGCGATCATGGCGGAGCAGACTGAGAGGGCATTCTTGAAGCAG
CCTAAGGTTTTTCTCTGTCCTAAGAAAACCACCAAGGGGAAGAAGCCTGGCAAGGGCGGG
AATAGGTTCTGGAAGAACATTGGCCTTGGGTTCAAGACACCCAGGGAAGCCATCGAAGGA
ACCTACATTGACAAGAAATGCCCATTCACTGGTACTGTATCAATTAGGGGTCGTATCATA
GCTGGAACATGTCATAGTGCTAAGATGAACAGGACCATTATTGTTCGGAGGAATTATCTG
CACTTTGTCAAGAAGTACCAGAGGTACGAGAAGAGGCACTCCAATATTCCTGCTCACATT
TCACCGTGCTTCCGTGTTAAGGAAGGAGATCACGTGATCATTGGCCAGTGCAGGCCACTG
TCAAAGACCGTGAGGTTCAATGTGCTGAAGGTCATTCCGGCAGGGTCAAAGAGTGGTGCA
GGGAAGAAGGTTTTCACAGCCGCTTAAGATGTATATGAGGAGATATTCAGGGTTCTGAAA
GCTTTGATCATGAGATTTTGATGCCACCTAGATGTCTTTCTCGTGTCTACCATCTTGACT
AGACAAGAGTTTACCTTTCTGTACTAGGAATTTGACTTGACTTTACTTGTCAAGCTTAAA
ATCTTAAGAAGTTTCTGCGCCCATGTCTGTCTGTGTACTGATCGTTTTCCCATTCAATCA
ACATATAGTTTGTAGAATGCTTGACGATGTGAAGATCTATC