Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0502200-01
CDS Infomation	cds chromosome:IRGSP-1.0:4:25067634:25075188:1 gene:Os04g0502200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:TRS120 description:Transport protein Trs120 domain containing protein. (Os04t0502200-01)
Sequence	ATGGAGCCCGGCGTGAGCATCGAGTCCGGGTCGGCGATCCGCGTGGCGGTGCTGCCGGTG GGCGGGCCGATCTCGCCGGCGCGCCTCCGCGACTACGCGGCGCTGGTGGCGCGGCACGCG CGCGTCGACCTCGCCTCGCTGCGGCCCTACTACTCGGAGCACCAGAAGAGCCCCTTCGCG CACCAGCCGTGGGGCGGCGGCTGCCTCCGCCTCAAGTTCGTGCTCGGCGGCTGCGTGCCC TCGCCGTGGGAGGACTTCCAGTCCTCCCGCAAGGTGCTCGCCGTCGTCGGCATCTGCCAC CTCCCGTCCTCCCCCGATCTCGGCCGCGTCGCCGCCGACTTCGTCGACGCCGCGCGCTCC TACCCCTCCGCGCTCGCCAGCCGCTGCTTCGCCTTCTGCCCCACCGACGCGCAGCTGGTG CAGAAAAAGAGGGATAATATTATTATGTTCCCTCCTTCTGATCAACAATCGTTGGAACTT CATATGCTCACGATGATCCAAGACCTTTCTGCTTCGCTGTTGATGGAGTTTGAGAAATGG GTCTTACGTGCAGAATCAACGGGAACTATTCTAAAGACTCCTTTGGATTCACAATCCAGT CTTGGCTCAGAGGAGGTGATTAAGGCTAAAAAAAGAAGGCTGGGTCGTGCGCAAAAGATA ATTGGAGATTATTGCTTGTTGGCTGGATCACCTGCTGATGCGAATGCACATTATGCCACT GCAATAGAGCTTGCAAGATTAACAGGAGATGTTTTCTGGCATGCTGGAGCCCTTGAGGGT AGTGTCTGTGCATTAGTGGTTGATAGGATGGCCGAAAGTGACCCTGTTTTGGAGGACGAA GTGAAGTTTCGTTATTACACCATTATCCAGCTATACAGAAGAGCAACTTTACAAGACAAT GCTCAAAGAGTTTCACCAGTCAGCTTTGAGCTTGAAGCTGCATTGAAGCTGGCAAGATAT TTGTGCAGGCGGCAATGTGCCAAGGAGGTGTCAGATTTACTAATGGGCGCTGCCGATGGT GCCAAGGCTCTGATTGATGCCAGTGATCGCTTGATACTCTATATTGAAATCGCGAGACTT TTTGGTACACTTGGTTATAAACGCAAGGCGGCCTTTTTTTCAAGACAAGTTGCGCAATTG TATCTCCAGCAGGATAATGCATATGCTGCTATGAGTGCTATGCAGGTCCTAACCACAACT ACAACTGCATACCATGTTCAAAGCAGGAAGACCAGCAAAATGGATCATGGTTTGCTCAAG TCTGTAGTATCACTATTTGAGTCACAATGGAGTACCCTTCAAATGGTTGTTCTAAGAGAG ATACTGATGTCTTCAATCCGGGCTGCGGATCCCTTATCGTCGTGGAGTGCTGCAGCCCGG CTTCTTCGGTCATTTTACCCACTCATCACCCCAGCTGGTCAGAGTGGCTTGGCAAGCTCT CTTTCAAACTCAGCTGATAAGCTTCCATCGGGCACACGTTGTGCCGATCCATGTCTTCCT TTTATCAGGTTGCATTCTTTCCCACTGCACCCTTCACAAAGAGAGATAGTGAAGCGCAAT CCAAATAAAAAAGAGTGGTGGACTGGTGGTGGTCCTTCTGGACCTTTTATTTACACACCT TTCACCAAGGGGGGAACATCTGGAACTAGCAAACAAGAGGTAAATTGGATTGTGGGAGAG CCAGTTCAAGTTATGGTAGAGTTAGCAAATCCCTGCAGCTTTGACCTAATTGTTGAGAGC ATTTATCTCTCTGTTCATTCTGGAAATTTTGATGCCTTTCCGGTTAGTGTTAATCTTCCA CCAAACACTTCCAAATTGGTTCTGTTATCTGGAATTCCAACACAAGTTGGACAAGTATCA ATTCCTGGGTGCATTGTTCATTGCTTCGGTGTTATCACAGAACACCTATTCAAAGAGGTC GATTGTCTACTCCTTGGAGCTGCACAAGGGCTTGTTCTTTCTGATCCTTTCAGATGCTGT GGCTCTAGCAAGTTTAAGAGCGTTAACTTTCCAAGCATTTCTGTTGTTCCTCCTCTGCCA TTATTAGTTGCCAATGTTGTGGGCGGAGATGGTTCTATTCTTCTATATGAAGGTGAAATC CGTGATGTTTTGATAACACTGACAAATGCTGGAACTGTACCTGTTGAAGAAGCAAATGTT GCATTGTCAGGGAAGAACCAAGATTCTGTTATTTCGATTGCCCATAGCACATGGAAATCT GCACTTCCTATTAAACCTGGTGGAGAAGTGACATTCGCAGTGACTCTCAGAGCCTGGCAT CTTAGCCCGACAGATTTGGAAGCAGATGGCAGCAGATCTCCTGCAAACTCAAGGAGGATA GCAAGAGAAGGGAGTAATCCTTTCTTGGATATTCACTATGCTGGTCCTTCAGGGAACTCT GAGAGCAATGATGTTTCTCTCCCACCTGGAAGACGTCTGGTTGTTCCGTTGAATATTTGT GTTGTACAGGGCATGCGACTTGTAAGAGCACGCCTGTTGTCCATGGAATTACCTGCCCGG TTTACTGATGCTCACTTAAGATCTGTCAGTAGCAAGGACAATCTAAGCAATGGCAGTGAT GCGATTCGTAATGACATTAGCTTATTGAAGATTGATCCTTATAAAGGAAGCTGGGACCTC CGTCTTCTGGAACTTGAGCTGTTTAATCCTACTGATGTTGTTTTCGATGTTGATGTCTCA GTTCATCTCGATGGCACAAGTGTCGAGCAAAAAATTCTTCCAGAGGATAAAACGGCCAGT TCGGCTTGCCACAAAACTCGAATTGATCGTGACTACTCTGCTAGAGTTCTCATACCTCTT GAGCACTTCAAATTACCTGTTCTTGACACTTCCTTCTTTGTGAAGGAAAATGGAAGTGAT GAACCTCTTGGATCCAGAGCTGCCACGTTAGCAGAAAAGAATGCCAAGGCGGAACTAAAT GCTTCAATCAACAACTTGATTTCAAAGATAAAAGTGAAGTGGCATTCTGGGAGAAATAGC TCCGGTGAGCTGAATATTAAAGATGCTATTCAGACAGCATTACAGGCATCTATTATGGAC ATACTGTTGCCTGATCCGCTGACATTCAGCTTTAGACATGCCAAGGATGGAACAACAGCC AAAACTGACTCTTCGAAGGAGCCTGGTGACGGTTCCAGTCGTTCTGCTGATGAGAGTGTT CTGAGGTGTAAGGATCCTATATTTGCTAATGAAATGACCCATATGGAAGTTCAAATTCGC AATAACACTAAGGAAACTATTCGGATGAACCTAAGCATTTCATGCAAAGATGTTGCTGGA GAGAATTGCTTCGACGAAAATAGCGCAACTGTCCTCTGGGCTGGTGTTCTTAGTGACATA TATCTGGAGGTTCAACCACTGCAGGAGGTAGTACATCCTTTTTCTATCTACTTCCTGGTC CCCGGAGACTACTCGCTGCAAGCTGCTTCTGTTATAATTGACGCAACCGATGTTCTTCGT GCTCGGGCAAAGGCAGAGTCGCCCGACGAACCTATACTATGCCGTGGATCTCCATTCCAT ATCCATGTAGTTGGTACAGCTTAG

Peptide Sequence

PEP ID	Os04t0502200-01
PEP Infomation	pep chromosome:IRGSP-1.0:4:25067634:25075188:1 gene:Os04g0502200 transcript:Os04t0502200-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:TRS120 description:Transport protein Trs120 domain containing protein. (Os04t0502200-01)
Sequence	MEPGVSIESGSAIRVAVLPVGGPISPARLRDYAALVARHARVDLASLRPYYSEHQKSPFA HQPWGGGCLRLKFVLGGCVPSPWEDFQSSRKVLAVVGICHLPSSPDLGRVAADFVDAARS YPSALASRCFAFCPTDAQLVQKKRDNIIMFPPSDQQSLELHMLTMIQDLSASLLMEFEKW VLRAESTGTILKTPLDSQSSLGSEEVIKAKKRRLGRAQKIIGDYCLLAGSPADANAHYAT AIELARLTGDVFWHAGALEGSVCALVVDRMAESDPVLEDEVKFRYYTIIQLYRRATLQDN AQRVSPVSFELEAALKLARYLCRRQCAKEVSDLLMGAADGAKALIDASDRLILYIEIARL FGTLGYKRKAAFFSRQVAQLYLQQDNAYAAMSAMQVLTTTTTAYHVQSRKTSKMDHGLLK SVVSLFESQWSTLQMVVLREILMSSIRAADPLSSWSAAARLLRSFYPLITPAGQSGLASS LSNSADKLPSGTRCADPCLPFIRLHSFPLHPSQREIVKRNPNKKEWWTGGGPSGPFIYTP FTKGGTSGTSKQEVNWIVGEPVQVMVELANPCSFDLIVESIYLSVHSGNFDAFPVSVNLP PNTSKLVLLSGIPTQVGQVSIPGCIVHCFGVITEHLFKEVDCLLLGAAQGLVLSDPFRCC GSSKFKSVNFPSISVVPPLPLLVANVVGGDGSILLYEGEIRDVLITLTNAGTVPVEEANV ALSGKNQDSVISIAHSTWKSALPIKPGGEVTFAVTLRAWHLSPTDLEADGSRSPANSRRI AREGSNPFLDIHYAGPSGNSESNDVSLPPGRRLVVPLNICVVQGMRLVRARLLSMELPAR FTDAHLRSVSSKDNLSNGSDAIRNDISLLKIDPYKGSWDLRLLELELFNPTDVVFDVDVS VHLDGTSVEQKILPEDKTASSACHKTRIDRDYSARVLIPLEHFKLPVLDTSFFVKENGSD EPLGSRAATLAEKNAKAELNASINNLISKIKVKWHSGRNSSGELNIKDAIQTALQASIMD ILLPDPLTFSFRHAKDGTTAKTDSSKEPGDGSSRSADESVLRCKDPIFANEMTHMEVQIR NNTKETIRMNLSISCKDVAGENCFDENSATVLWAGVLSDIYLEVQPLQEVVHPFSIYFLV PGDYSLQAASVIIDATDVLRARAKAESPDEPILCRGSPFHIHVVGTA

Transcript Sequence

Transcript ID	Os04t0502200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:25067634:25075188:1 gene:Os04g0502200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:TRS120 description:Transport protein Trs120 domain containing protein. (Os04t0502200-01)
Sequence	CCACCTTCGTCAGATCTGCCATTACCGAAGCCGAGCAGGCGAGGCGAGGCGAGGCGAGCG GACGCCATGGAGCCCGGCGTGAGCATCGAGTCCGGGTCGGCGATCCGCGTGGCGGTGCTG CCGGTGGGCGGGCCGATCTCGCCGGCGCGCCTCCGCGACTACGCGGCGCTGGTGGCGCGG CACGCGCGCGTCGACCTCGCCTCGCTGCGGCCCTACTACTCGGAGCACCAGAAGAGCCCC TTCGCGCACCAGCCGTGGGGCGGCGGCTGCCTCCGCCTCAAGTTCGTGCTCGGCGGCTGC GTGCCCTCGCCGTGGGAGGACTTCCAGTCCTCCCGCAAGGTGCTCGCCGTCGTCGGCATC TGCCACCTCCCGTCCTCCCCCGATCTCGGCCGCGTCGCCGCCGACTTCGTCGACGCCGCG CGCTCCTACCCCTCCGCGCTCGCCAGCCGCTGCTTCGCCTTCTGCCCCACCGACGCGCAG CTGGTGCAGAAAAAGAGGGATAATATTATTATGTTCCCTCCTTCTGATCAACAATCGTTG GAACTTCATATGCTCACGATGATCCAAGACCTTTCTGCTTCGCTGTTGATGGAGTTTGAG AAATGGGTCTTACGTGCAGAATCAACGGGAACTATTCTAAAGACTCCTTTGGATTCACAA TCCAGTCTTGGCTCAGAGGAGGTGATTAAGGCTAAAAAAAGAAGGCTGGGTCGTGCGCAA AAGATAATTGGAGATTATTGCTTGTTGGCTGGATCACCTGCTGATGCGAATGCACATTAT GCCACTGCAATAGAGCTTGCAAGATTAACAGGAGATGTTTTCTGGCATGCTGGAGCCCTT GAGGGTAGTGTCTGTGCATTAGTGGTTGATAGGATGGCCGAAAGTGACCCTGTTTTGGAG GACGAAGTGAAGTTTCGTTATTACACCATTATCCAGCTATACAGAAGAGCAACTTTACAA GACAATGCTCAAAGAGTTTCACCAGTCAGCTTTGAGCTTGAAGCTGCATTGAAGCTGGCA AGATATTTGTGCAGGCGGCAATGTGCCAAGGAGGTGTCAGATTTACTAATGGGCGCTGCC GATGGTGCCAAGGCTCTGATTGATGCCAGTGATCGCTTGATACTCTATATTGAAATCGCG AGACTTTTTGGTACACTTGGTTATAAACGCAAGGCGGCCTTTTTTTCAAGACAAGTTGCG CAATTGTATCTCCAGCAGGATAATGCATATGCTGCTATGAGTGCTATGCAGGTCCTAACC ACAACTACAACTGCATACCATGTTCAAAGCAGGAAGACCAGCAAAATGGATCATGGTTTG CTCAAGTCTGTAGTATCACTATTTGAGTCACAATGGAGTACCCTTCAAATGGTTGTTCTA AGAGAGATACTGATGTCTTCAATCCGGGCTGCGGATCCCTTATCGTCGTGGAGTGCTGCA GCCCGGCTTCTTCGGTCATTTTACCCACTCATCACCCCAGCTGGTCAGAGTGGCTTGGCA AGCTCTCTTTCAAACTCAGCTGATAAGCTTCCATCGGGCACACGTTGTGCCGATCCATGT CTTCCTTTTATCAGGTTGCATTCTTTCCCACTGCACCCTTCACAAAGAGAGATAGTGAAG CGCAATCCAAATAAAAAAGAGTGGTGGACTGGTGGTGGTCCTTCTGGACCTTTTATTTAC ACACCTTTCACCAAGGGGGGAACATCTGGAACTAGCAAACAAGAGGTAAATTGGATTGTG GGAGAGCCAGTTCAAGTTATGGTAGAGTTAGCAAATCCCTGCAGCTTTGACCTAATTGTT GAGAGCATTTATCTCTCTGTTCATTCTGGAAATTTTGATGCCTTTCCGGTTAGTGTTAAT CTTCCACCAAACACTTCCAAATTGGTTCTGTTATCTGGAATTCCAACACAAGTTGGACAA GTATCAATTCCTGGGTGCATTGTTCATTGCTTCGGTGTTATCACAGAACACCTATTCAAA GAGGTCGATTGTCTACTCCTTGGAGCTGCACAAGGGCTTGTTCTTTCTGATCCTTTCAGA TGCTGTGGCTCTAGCAAGTTTAAGAGCGTTAACTTTCCAAGCATTTCTGTTGTTCCTCCT CTGCCATTATTAGTTGCCAATGTTGTGGGCGGAGATGGTTCTATTCTTCTATATGAAGGT GAAATCCGTGATGTTTTGATAACACTGACAAATGCTGGAACTGTACCTGTTGAAGAAGCA AATGTTGCATTGTCAGGGAAGAACCAAGATTCTGTTATTTCGATTGCCCATAGCACATGG AAATCTGCACTTCCTATTAAACCTGGTGGAGAAGTGACATTCGCAGTGACTCTCAGAGCC TGGCATCTTAGCCCGACAGATTTGGAAGCAGATGGCAGCAGATCTCCTGCAAACTCAAGG AGGATAGCAAGAGAAGGGAGTAATCCTTTCTTGGATATTCACTATGCTGGTCCTTCAGGG AACTCTGAGAGCAATGATGTTTCTCTCCCACCTGGAAGACGTCTGGTTGTTCCGTTGAAT ATTTGTGTTGTACAGGGCATGCGACTTGTAAGAGCACGCCTGTTGTCCATGGAATTACCT GCCCGGTTTACTGATGCTCACTTAAGATCTGTCAGTAGCAAGGACAATCTAAGCAATGGC AGTGATGCGATTCGTAATGACATTAGCTTATTGAAGATTGATCCTTATAAAGGAAGCTGG GACCTCCGTCTTCTGGAACTTGAGCTGTTTAATCCTACTGATGTTGTTTTCGATGTTGAT GTCTCAGTTCATCTCGATGGCACAAGTGTCGAGCAAAAAATTCTTCCAGAGGATAAAACG GCCAGTTCGGCTTGCCACAAAACTCGAATTGATCGTGACTACTCTGCTAGAGTTCTCATA CCTCTTGAGCACTTCAAATTACCTGTTCTTGACACTTCCTTCTTTGTGAAGGAAAATGGA AGTGATGAACCTCTTGGATCCAGAGCTGCCACGTTAGCAGAAAAGAATGCCAAGGCGGAA CTAAATGCTTCAATCAACAACTTGATTTCAAAGATAAAAGTGAAGTGGCATTCTGGGAGA AATAGCTCCGGTGAGCTGAATATTAAAGATGCTATTCAGACAGCATTACAGGCATCTATT ATGGACATACTGTTGCCTGATCCGCTGACATTCAGCTTTAGACATGCCAAGGATGGAACA ACAGCCAAAACTGACTCTTCGAAGGAGCCTGGTGACGGTTCCAGTCGTTCTGCTGATGAG AGTGTTCTGAGGTGTAAGGATCCTATATTTGCTAATGAAATGACCCATATGGAAGTTCAA ATTCGCAATAACACTAAGGAAACTATTCGGATGAACCTAAGCATTTCATGCAAAGATGTT GCTGGAGAGAATTGCTTCGACGAAAATAGCGCAACTGTCCTCTGGGCTGGTGTTCTTAGT GACATATATCTGGAGGTTCAACCACTGCAGGAGGTAGTACATCCTTTTTCTATCTACTTC CTGGTCCCCGGAGACTACTCGCTGCAAGCTGCTTCTGTTATAATTGACGCAACCGATGTT CTTCGTGCTCGGGCAAAGGCAGAGTCGCCCGACGAACCTATACTATGCCGTGGATCTCCA TTCCATATCCATGTAGTTGGTACAGCTTAGCCGGACTTTCTTGGATTTAGTCTAGAGCGT GCCCTGTATCGTGCGTGAGTTTCGTGACATGTGCAGCTGCGAAGATCATGTAGAATTTTT ATGCACATCTGATTTATTTGAGCCGCATGAAGGCTTCCCTGTAACACAGTTGTGTTTTGT ACAGTGTAAAAGCATAGTGAAGGTTGTTTC