Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0500700-02
CDS Infomation	cds chromosome:IRGSP-1.0:4:24994004:24999530:1 gene:Os04g0500700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HYDROXYCINNAMOYLTRANSFERASE 1 description:Similar to Hydroxyanthranilate hydroxycinnamoyltransferase 3. (Os04t0500700-01);Similar to Hydroxyanthranilate hydroxycinnamoyltransferase 3. (Os04t0500700-02)
Sequence	ATGGCGATCACGGTGAGGCGGTCGACGATGGTGCGGCCGGCGTGGGAGACGCCGCGGGTG CGGCTGTGGAACTCGAACCTCGACCTCGTGGTGCCGCGGTTCCACACCCCAAGCGTCTAC TTCTACCGCCGGGGCCCCGAGGGAGGGGGCGCGCCGGAGGGGTTCTTCGACGGGGAGCGG ATGCGGCGCGCGCTGGCGGAGGCGCTCGTGCCGTTCTACCCGATGGCCGGGCGGCTCGCG CGCGACGAGGACGGGAGGGTCGAGATCGACTGCAACGGGGAAGGGGTGCTCTTCGTCGAG GCCGACGCGCCCGACGCCTCCGTCGATGACTACGGCGACTTCGCGCCCACCATGGAGCTC AAGCGCCTCATCCCTGCCGTTGATTACACCGACGACATCTCCTCCTTCTCGCTCCTCGTG CTCCAGGTGACCTACTTCAAGTGCGGAGGTGTCTCCCTTGGAGTTGGTATGCAACACCAT GTGGCGGATGGCATGTCCGGTTTGCACTTTATTAACTCATGGTCTGACCTCTGCCGAGGA ACTCAAATTGCCATCATGCCCTTCATTGACCGCACTCTCCTACGAGCCCGAGATCCACCA ACTCCATCATACCCACATGTTGAGTACCAGCCTGCCCCAGCCATGCTGTCCTCCGTACCC CAGTCTGTTACTGCTAATAAGACAACACCACCTCCAACTGCTGTGGACATTTTCAAGCTT ACCCGCTCAGACCTTGGTCGACTGCGTTCGCAGCTCCCATCAGGAGAAGGTGCACCACGT TTCAGCACATATGCAGTTCTTGCTGCACATGTCTGGCGATGCGTATCTCTTGCACGTGGC CTGCCTTCTGAACAGCCCACTAAGCTGTATTGTGCCACTGATGGGCGACAACGGTTGCAG CCTCCACTTCCAGAAGGTTACTTTGGGAATGTCATTTTCACCGCCACTCCACTTGCTGAG GCAGGCAAGGTGACCAGTGGGCTGGCAGATGGAGCAGCAGTCATCCAAGAGGCGCTAGAT AGGATGAACGATAGCTACTGCCGCTCAGCATTGGACTACCTGGAGCTGCAGCCTGATTTA TCAGCATTGGTCCGTGGAGCACACACTTTCCGGTGTCCGAACCTCGGGCTCACCAGCTGG GTGCGCTTGCCAATTCATGATGCAGATTTTGGATGGGGAAGACCAGTGTTCATGGGTCCT GGTGGCATCGCCTATGAAGGGCTGGCGTTTGTCCTCCCAAGCGCGAACAAGGATGGTAGC CTATCCATAGCCATCTCATTGCAGGCTGAGCACATGGAGAAGTTCAGGAAGCTGATCTTC GAGGTGTAA

Peptide Sequence

PEP ID	Os04t0500700-02
PEP Infomation	pep chromosome:IRGSP-1.0:4:24994004:24999530:1 gene:Os04g0500700 transcript:Os04t0500700-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HYDROXYCINNAMOYLTRANSFERASE 1 description:Similar to Hydroxyanthranilate hydroxycinnamoyltransferase 3. (Os04t0500700-01);Similar to Hydroxyanthranilate hydroxycinnamoyltransferase 3. (Os04t0500700-02)
Sequence	MAITVRRSTMVRPAWETPRVRLWNSNLDLVVPRFHTPSVYFYRRGPEGGGAPEGFFDGER MRRALAEALVPFYPMAGRLARDEDGRVEIDCNGEGVLFVEADAPDASVDDYGDFAPTMEL KRLIPAVDYTDDISSFSLLVLQVTYFKCGGVSLGVGMQHHVADGMSGLHFINSWSDLCRG TQIAIMPFIDRTLLRARDPPTPSYPHVEYQPAPAMLSSVPQSVTANKTTPPPTAVDIFKL TRSDLGRLRSQLPSGEGAPRFSTYAVLAAHVWRCVSLARGLPSEQPTKLYCATDGRQRLQ PPLPEGYFGNVIFTATPLAEAGKVTSGLADGAAVIQEALDRMNDSYCRSALDYLELQPDL SALVRGAHTFRCPNLGLTSWVRLPIHDADFGWGRPVFMGPGGIAYEGLAFVLPSANKDGS LSIAISLQAEHMEKFRKLIFEV

Transcript Sequence

Transcript ID	Os04t0500700-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:24994004:24999530:1 gene:Os04g0500700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HYDROXYCINNAMOYLTRANSFERASE 1 description:Similar to Hydroxyanthranilate hydroxycinnamoyltransferase 3. (Os04t0500700-01);Similar to Hydroxyanthranilate hydroxycinnamoyltransferase 3. (Os04t0500700-02)
Sequence	AGCTGCTCTCCACCAAGAGCTGCTCCGCCCCCCTACCCCGCAACCCGTTGCTTTGTGCCG CGCCTCGCTTTGGTCTTCATCCGCCTCAGATCTGATTCGTTCTAGGTTGGTCTGGGGAAG ATGGCGATCACGGTGAGGCGGTCGACGATGGTGCGGCCGGCGTGGGAGACGCCGCGGGTG CGGCTGTGGAACTCGAACCTCGACCTCGTGGTGCCGCGGTTCCACACCCCAAGCGTCTAC TTCTACCGCCGGGGCCCCGAGGGAGGGGGCGCGCCGGAGGGGTTCTTCGACGGGGAGCGG ATGCGGCGCGCGCTGGCGGAGGCGCTCGTGCCGTTCTACCCGATGGCCGGGCGGCTCGCG CGCGACGAGGACGGGAGGGTCGAGATCGACTGCAACGGGGAAGGGGTGCTCTTCGTCGAG GCCGACGCGCCCGACGCCTCCGTCGATGACTACGGCGACTTCGCGCCCACCATGGAGCTC AAGCGCCTCATCCCTGCCGTTGATTACACCGACGACATCTCCTCCTTCTCGCTCCTCGTG CTCCAGGTGACCTACTTCAAGTGCGGAGGTGTCTCCCTTGGAGTTGGTATGCAACACCAT GTGGCGGATGGCATGTCCGGTTTGCACTTTATTAACTCATGGTCTGACCTCTGCCGAGGA ACTCAAATTGCCATCATGCCCTTCATTGACCGCACTCTCCTACGAGCCCGAGATCCACCA ACTCCATCATACCCACATGTTGAGTACCAGCCTGCCCCAGCCATGCTGTCCTCCGTACCC CAGTCTGTTACTGCTAATAAGACAACACCACCTCCAACTGCTGTGGACATTTTCAAGCTT ACCCGCTCAGACCTTGGTCGACTGCGTTCGCAGCTCCCATCAGGAGAAGGTGCACCACGT TTCAGCACATATGCAGTTCTTGCTGCACATGTCTGGCGATGCGTATCTCTTGCACGTGGC CTGCCTTCTGAACAGCCCACTAAGCTGTATTGTGCCACTGATGGGCGACAACGGTTGCAG CCTCCACTTCCAGAAGGTTACTTTGGGAATGTCATTTTCACCGCCACTCCACTTGCTGAG GCAGGCAAGGTGACCAGTGGGCTGGCAGATGGAGCAGCAGTCATCCAAGAGGCGCTAGAT AGGATGAACGATAGCTACTGCCGCTCAGCATTGGACTACCTGGAGCTGCAGCCTGATTTA TCAGCATTGGTCCGTGGAGCACACACTTTCCGGTGTCCGAACCTCGGGCTCACCAGCTGG GTGCGCTTGCCAATTCATGATGCAGATTTTGGATGGGGAAGACCAGTGTTCATGGGTCCT GGTGGCATCGCCTATGAAGGGCTGGCGTTTGTCCTCCCAAGCGCGAACAAGGATGGTAGC CTATCCATAGCCATCTCATTGCAGGCTGAGCACATGGAGAAGTTCAGGAAGCTGATCTTC GAGGTGTAAGCAGACTACTTATGTTATGTCAGGGAGAAGTTGTAGAGCTAGAGTTCTCAG GTAAAATACCTTCAAGTGAGTCATGGGGGCTATGCTCTTGCTCCTGTTGAGCAAATTGTC TGGCCACGTTCTCTTGTACCTTAGCTTGCAAGGATATTTGGCCATCACCACAGCCGTGTG ACGATGTGAGCAACCAATAATGAGCTGTTTTTTTGTTTTCGTTTAGGATAGGAATCAACA ATGAAGAAAAGGTGCTGTATTCTGTGAAACTACATGGCAGTGTTGTTCTTACCAAAAATA CATGACAAGTGAATTGGGTCAAGTTATTGCCTGTTGTAGCTCAAGTCGATAGATGAACAT CATTGTACAGTACGAATGTACGATACGACTATAACAGCCTGATTGCCTATGAACTGCAAG TAAATGCATGTGAATAACTG