Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os04t0500300-01
CDS Infomation

cds chromosome:IRGSP-1.0:4:24973156:24974044:1 gene:Os04g0500300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os04t0500300-01)
Sequence

ATGACAGGCATGGGTTCTTCCATCGGCCGTGCCACCATTTTCTACTGCGTTGCTCTATCC
ATAATTGCCGGCGCCGCAGCGACACAGGTGCCCCCCACCGAAGCAGAGTCCGTAGAAGCG
GCAGAGCTTGCGTCCTCTGCCTTCAAGGCCGACACGTTGCCCTCAGCCTCCCGCAAGCTG
ATGGCCGTTAGTGACGTGCCGCTAGCGCCGGTGTGCCCGGTGCGGTTCGACAAGATGAAG
GGGCCCGCCATCGAGCTGGGAAAGAAGTGCAAGACGACAGGGGTGAAGGTGTGCTGTGAG
GCGTTCAAGACATTCGCATGCCCGCACAACAAGCTGATCAATGACGTCAACAACGGATGC
GCGGACGAAATGTTCTACACCATCCACACCTACGGCCAATTGCTGCCGGGAACCATCTTC
AAGAAATGCCTCGAGGGACCGCATGGGATGAAGTGTTGA

Peptide Sequence

PEP ID

Os04t0500300-01
PEP Infomation

pep chromosome:IRGSP-1.0:4:24973156:24974044:1 gene:Os04g0500300 transcript:Os04t0500300-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os04t0500300-01)
Sequence

MTGMGSSIGRATIFYCVALSIIAGAAATQVPPTEAESVEAAELASSAFKADTLPSASRKL
MAVSDVPLAPVCPVRFDKMKGPAIELGKKCKTTGVKVCCEAFKTFACPHNKLINDVNNGC
ADEMFYTIHTYGQLLPGTIFKKCLEGPHGMKC

Transcript Sequence

Transcript ID

Os04t0500300-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:4:24973156:24974044:1 gene:Os04g0500300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os04t0500300-01)
Sequence

AACCAATCATCATTCCCTCATCCCATTAAATTTGCTCAAATAATTAAATATGACAGGCAT
GGGTTCTTCCATCGGCCGTGCCACCATTTTCTACTGCGTTGCTCTATCCATAATTGCCGG
CGCCGCAGCGACACAGGTGCCCCCCACCGAAGCAGAGTCCGTAGAAGCGGCAGAGCTTGC
GTCCTCTGCCTTCAAGGCCGACACGTTGCCCTCAGCCTCCCGCAAGCTGATGGCCGTTAG
TGACGTGCCGCTAGCGCCGGTGTGCCCGGTGCGGTTCGACAAGATGAAGGGGCCCGCCAT
CGAGCTGGGAAAGAAGTGCAAGACGACAGGGGTGAAGGTGTGCTGTGAGGCGTTCAAGAC
ATTCGCATGCCCGCACAACAAGCTGATCAATGACGTCAACAACGGATGCGCGGACGAAAT
GTTCTACACCATCCACACCTACGGCCAATTGCTGCCGGGAACCATCTTCAAGAAATGCCT
CGAGGGACCGCATGGGATGAAGTGTTGAATTCGATCGTGCTGATTCGACTTGCTCGATCG
ATATCGCTCCGTTGTTGCTAGCCTCCGGCCTGATCTATACTACCTATAACGATGAATGTC
CCTTTCGTCATCTTGCAATGTAACTAAACTTACTTTTATTACTTCGAAATGCAATGAACC
ACAAAAGGTTTATT